; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy11g011900 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g011900
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein RRP5
Genome locationChr11:14819791..14825966
RNA-Seq ExpressionLcy11g011900
SyntenyLcy11g011900
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3381.73Show/hide
Query:  SHLSAMAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAK
        ++LSAMAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAK
Subjt:  SHLSAMAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAK

Query:  TLYE
        TLYE
Subjt:  TLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]1.1e-3079.8Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKNRNKKK+ GA+SMD+TEN+ +ELPQAMDVS S VHKPASGA +LKLKK RPMKRSKNVR  KA+AKAISK EQ+ EKILKNQSK  RIQSAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]1.6e-3182.83Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

XP_022985277.1 uncharacterized protein LOC111483316 [Cucurbita maxima]8.9e-3081.82Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKN+NKK+ SGA+SMDITENT +ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]6.6e-3383.84Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKNRNKKK+SG +SMD+TENT +ELPQAMDVSESAVHKP SGA NLKLKK RPMKRSKNVR  KAMAKAISK EQ+TEKILKNQSK  RIQSAK LYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1R3KBZ2 Uncharacterized protein6.7e-2364.65Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKNR KKKQ+GA SMD++E T  +LPQAMD SE+ V KP SGA  +K+KK RPMKRSKNVR IK++AKAI+K EQ  EK  K++SK  R QSAK+LY+
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

A0A1S3BUB2 uncharacterized protein LOC1034933625.1e-3179.8Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKNRNKKK+ GA+SMD+TEN+ +ELPQAMDVS S VHKPASGA +LKLKK RPMKRSKNVR  KA+AKAISK EQ+ EKILKNQSK  RIQSAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

A0A6A6MLZ5 Uncharacterized protein7.2e-2569.7Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKNRNKKK++GA+SMDITE T +++PQAMD SES V K ASG PN K+ K RPMKRSKNVR +KA+AKAISK EQ+ EK+LKN+SK  R QSAK LY+
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

A0A6J1EMH0 uncharacterized protein LOC1114358677.9e-3282.83Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833164.3e-3081.82Show/hide
Query:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE
        MAKN+NKK+ SGA+SMDITENT +ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Subjt:  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein2.4e-0439.29Show/hide
Query:  MAKNRNKKKQSGAMSMDITE--NTFNELPQAMDVSESAVHKPASGAPNL-KLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKI
        M K RNKK +    SMD++E  +     PQ MD +E+   K AS A +L   +K +PMKR+K   N+KA+A A+   E    K+
Subjt:  MAKNRNKKKQSGAMSMDITE--NTFNELPQAMDVSESAVHKPASGAPNL-KLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGACGGTGTCGAGCTAGGCACAGGATT
GTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCAAAGTGGGGCTATGTCTA
TGGACATAACCGAAAATACCTTTAACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTAAAGTTGAAAAAGAGA
AGACCAATGAAGCGGTCAAAGAACGTTAGGAATATAAAAGCCATGGCGAAGGCCATATCCAAGGGTGAGCAGACAACAGAGAAAATATTGAAAAATCAGAGCAAAATTAT
CAGAATACAATCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGACGGTGTCGAGCTAGGCACAGGATT
GTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCAAAGTGGGGCTATGTCTA
TGGACATAACCGAAAATACCTTTAACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTAAAGTTGAAAAAGAGA
AGACCAATGAAGCGGTCAAAGAACGTTAGGAATATAAAAGCCATGGCGAAGGCCATATCCAAGGGTGAGCAGACAACAGAGAAAATATTGAAAAATCAGAGCAAAATTAT
CAGAATACAATCTGCAAAAACATTGTATGAATGA
Protein sequenceShow/hide protein sequence
MTRRGISHDVVSYASIISGYSKARNLYKDGVELGTGLCARWYSGMLHAQIAPLSHLSAMAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKR
RPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE