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Lcy11g013680 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g013680
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMYB transcription factor
Genome locationChr11:22036433..22037351
RNA-Seq ExpressionLcy11g013680
SyntenyLcy11g013680
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0003691 - double-stranded telomeric DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044597 - Single myb histone 1-6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606708.1 Telomere repeat-binding factor 4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2164.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

KAG7036424.1 Telomere repeat-binding factor 4 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2164.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

XP_022152584.1 telomere repeat-binding factor 4-like [Momordica charantia]1.5e-2164.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV  HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSRA KA+AIV      NQ+S P R +A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

XP_022998553.1 telomere repeat-binding factor 4-like [Cucurbita maxima]1.5e-2164.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

XP_023525823.1 telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo]1.5e-2164.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

TrEMBL top hitse value%identityAlignment
A0A6J1DGG1 MYB transcription factor7.2e-2264.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV  HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSRA KA+AIV      NQ+S P R +A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

A0A6J1GCH5 MYB transcription factor7.2e-2264.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

A0A6J1GWF6 MYB transcription factor4.7e-2163.92Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD
        M NQK KWT EEE+AL AGV  HG GKWKNILKD E A  LT RSN+DLKDKWRNLS+   SQ  K+KSRA KA+AIV     +Q+SAP +F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD

A0A6J1J017 MYB transcription factor1.6e-2164.95Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD
        M NQK KWT EEEDAL AGV  HG GKWKNILKD E A  LT RSN+DLKDKWRNLS+   SQ  K+KSRA KA+AIV     +Q+SAP +F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD

A0A6J1KEM4 MYB transcription factor7.2e-2264.29Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD
        M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+   SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD

SwissProt top hitse value%identityAlignment
F4I7L1 Telomere repeat-binding factor 42.3e-1761.84Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS---QRQKKKSRASKAEA
        M NQK KWT EEE+AL AGV+ HG GKWKNIL+D E+A  L+ RSN+DLKDKWRNLS++   Q  K K R  K +A
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS---QRQKKKSRASKAEA

F4IEY4 Telomere repeat-binding factor 54.4e-1658.67Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE
        M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+   +Q    K+R +K +
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE

Q6WLH4 Single myb histone 31.2e-1348.81Show/hide
Query:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPTRFDAAV
        K+KWT EEEDAL  GV+ HG GKW+ I KD + +  L+ RSN+DLKDKWRNLS S      S+  +   I   SS+P+    A+
Subjt:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPTRFDAAV

Q8W119 Single myb histone 43.1e-1453.85Show/hide
Query:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPT
        K+KWT EEEDAL AGV+ HG GKW+ I KD E +  L+ RSN+DLKDKWRNLS S      S+  +   I   SS+P+
Subjt:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPT

Q9FJW5 Telomere repeat-binding factor 22.0e-1356.72Show/hide
Query:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA
        K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     + +A  A
Subjt:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA

Arabidopsis top hitse value%identityAlignment
AT1G17520.1 Homeodomain-like/winged-helix DNA-binding family protein1.6e-1861.84Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS---QRQKKKSRASKAEA
        M NQK KWT EEE+AL AGV+ HG GKWKNIL+D E+A  L+ RSN+DLKDKWRNLS++   Q  K K R  K +A
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS---QRQKKKSRASKAEA

AT1G72740.1 Homeodomain-like/winged-helix DNA-binding family protein3.1e-1758.67Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE
        M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+   +Q    K+R +K +
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE

AT1G72740.2 Homeodomain-like/winged-helix DNA-binding family protein3.1e-1758.67Show/hide
Query:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE
        M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+   +Q    K+R +K +
Subjt:  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL---SQRQKKKSRASKAE

AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein1.4e-1456.72Show/hide
Query:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA
        K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     + +A  A
Subjt:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA

AT5G67580.2 Homeodomain-like/winged-helix DNA-binding family protein1.4e-1456.72Show/hide
Query:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA
        K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     + +A  A
Subjt:  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAACCAGAAGCGAAAGTGGACGCTGGAGGAAGAAGATGCACTTTTTGCCGGTGTAAAGATGCACGGTCTCGGAAAGTGGAAGAACATTCTCAAAGATCTT
GAAGTCGCTCTGTTTCTCACTCAGCGCTCGAACGTTGACCTTAAGGACAAATGGCGTAATTTGAGCCTTTCACAACGCCAAAAAAAGAAGTCCAGAGCTTCTAAA
GCAGAAGCTATCGTCAACCAAAGCTCTGCCCCTACTAGGTTTGATGCAGCTGTTGATATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAAACCAGAAGCGAAAGTGGACGCTGGAGGAAGAAGATGCACTTTTTGCCGGTGTAAAGATGCACGGTCTCGGAAAGTGGAAGAACATTCTCAAAGATCTT
GAAGTCGCTCTGTTTCTCACTCAGCGCTCGAACGTTGACCTTAAGGACAAATGGCGTAATTTGAGCCTTTCACAACGCCAAAAAAAGAAGTCCAGAGCTTCTAAA
GCAGAAGCTATCGTCAACCAAAGCTCTGCCCCTACTAGGTTTGATGCAGCTGTTGATATATAG
Protein sequenceShow/hide protein sequence
MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPTRFDAAVDI