; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy11g014190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g014190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H
Genome locationChr11:27157274..27158561
RNA-Seq ExpressionLcy11g014190
SyntenyLcy11g014190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]4.2e-3154.47Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E EA  + HPHNDALV+TL IANA+VHR+L+DGGSS D+ S TA++ M LG++ LK SLTPLIGFGGE++ P+G IELP+TF  
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
          +SIT++++FLVVD   +YN +
Subjt:  GQRSITKLINFLVVDCLPTYNAV

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]6.5e-3262.16Show/hide
Query:  LEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGEGQRSITKLINFL
        +EF+++    + HPHNDAL++TL IANA+VHR+L+DGGSSAD +S TA++ M LGK+ LK SLTPLIGFGGE+V P G IELPVTF  G +SITK+++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGEGQRSITKLINFL

Query:  VVDCLPTYNAV
        VVD   +YNA+
Subjt:  VVDCLPTYNAV

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.2e-3256.91Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    +N Q  +EF+E EA  + HPHNDALV+TL IAN +VHR+L+DGGSSAD++S TA++ M LG+  LK S  PL+GFGGE+V  EG IELPVTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
        G +S+TK+++FLVV+   +YNA+
Subjt:  GQRSITKLINFLVVDCLPTYNAV

XP_022158432.1 uncharacterized protein LOC111024924 [Momordica charantia]3.6e-3055.28Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E+EA  + H HNDALV+TL IANA+VHR+L++ GSSAD++S T ++ M LG+  LK S  PLIGFGGE+V PEG IELPVTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
        G +SITK+++FLVV+   +YNA+
Subjt:  GQRSITKLINFLVVDCLPTYNAV

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.5e-3150Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E+EA  + HPHNDALV+TL IAN +VHR+L+DGGSSAD++S T ++VM LG+  LK S  PLIGFG E+V PEG IEL VTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAVRIAGSSLYSPVQCLHGRVEPSLPDPMS
        G +S+TK+++FLVVD   +YNA  I G S    ++ +      S+  P S
Subjt:  GQRSITKLINFLVVDCLPTYNAVRIAGSSLYSPVQCLHGRVEPSLPDPMS

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.0e-3154.47Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E EA  + HPHNDALV+TL IANA+VHR+L+DGGSS D+ S TA++ M LG++ LK SLTPLIGFGGE++ P+G IELP+TF  
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
          +SIT++++FLVVD   +YN +
Subjt:  GQRSITKLINFLVVDCLPTYNAV

A0A6J1DKR9 uncharacterized protein LOC1110214383.1e-3262.16Show/hide
Query:  LEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGEGQRSITKLINFL
        +EF+++    + HPHNDAL++TL IANA+VHR+L+DGGSSAD +S TA++ M LGK+ LK SLTPLIGFGGE+V P G IELPVTF  G +SITK+++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGEGQRSITKLINFL

Query:  VVDCLPTYNAV
        VVD   +YNA+
Subjt:  VVDCLPTYNAV

A0A6J1DQY2 uncharacterized protein LOC1110223211.1e-3256.91Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    +N Q  +EF+E EA  + HPHNDALV+TL IAN +VHR+L+DGGSSAD++S TA++ M LG+  LK S  PL+GFGGE+V  EG IELPVTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
        G +S+TK+++FLVV+   +YNA+
Subjt:  GQRSITKLINFLVVDCLPTYNAV

A0A6J1DX76 uncharacterized protein LOC1110249241.7e-3055.28Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E+EA  + H HNDALV+TL IANA+VHR+L++ GSSAD++S T ++ M LG+  LK S  PLIGFGGE+V PEG IELPVTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAV
        G +SITK+++FLVV+   +YNA+
Subjt:  GQRSITKLINFLVVDCLPTYNAV

A0A6J1DXV4 uncharacterized protein LOC1110251471.2e-3150Show/hide
Query:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE
        +Y    ++    +EF+E+EA  + HPHNDALV+TL IAN +VHR+L+DGGSSAD++S T ++VM LG+  LK S  PLIGFG E+V PEG IEL VTFG 
Subjt:  MYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGE

Query:  GQRSITKLINFLVVDCLPTYNAVRIAGSSLYSPVQCLHGRVEPSLPDPMS
        G +S+TK+++FLVVD   +YNA  I G S    ++ +      S+  P S
Subjt:  GQRSITKLINFLVVDCLPTYNAVRIAGSSLYSPVQCLHGRVEPSLPDPMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGAGGTATGTATTCCCTCCGATTTTCCAACAACCAGTTTAACCTAGAATTCACAGAAGAAGAAGCTGCGGGAATCCATCATCCACATAATGATGCATTGGTGGT
GACTTTAACCATTGCCAATGCAAGAGTTCATCGAGTCCTAATTGATGGAGGGAGCTCCGCCGATGTTCTTTCCACAACCGCTTTTGAGGTAATGAAATTGGGAAAGGATC
ATCTGAAGCCGAGTCTTACACCACTCATAGGATTTGGAGGAGAGAAGGTGAGCCCGGAAGGAAGCATCGAGCTACCAGTAACATTCGGGGAGGGGCAACGATCGATTACC
AAGCTGATTAACTTCTTGGTAGTAGATTGCCTTCCGACGTATAACGCTGTCCGCATAGCCGGGTCGAGCCTTTACTCCCCTGTTCAATGTCTGCACGGCCGGGTCGAGCC
TTCACTCCCCGATCCAATGTCCACACGGCCTGTGTCTGCACGGCCGAGTCGAGCCTTCACTCCCCGGTCCAGTGTTCGCACGGTTGGGCCAAGCCCATACACCCCAATCC
GATGTCCGCATGGTCGGGTCGAGCCCACGCTCGAAAGTGATTACTTACCTATGCAAAGCATAGACCAGGGAACAAGAGCTAGCCGCGAGTACAGACGTGACTACAGGGAT
GCCAAGAAGACGAAACCTCGTAGCCTCTTGTCTTGGCCGAGGCCGAGCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGAGGTATGTATTCCCTCCGATTTTCCAACAACCAGTTTAACCTAGAATTCACAGAAGAAGAAGCTGCGGGAATCCATCATCCACATAATGATGCATTGGTGGT
GACTTTAACCATTGCCAATGCAAGAGTTCATCGAGTCCTAATTGATGGAGGGAGCTCCGCCGATGTTCTTTCCACAACCGCTTTTGAGGTAATGAAATTGGGAAAGGATC
ATCTGAAGCCGAGTCTTACACCACTCATAGGATTTGGAGGAGAGAAGGTGAGCCCGGAAGGAAGCATCGAGCTACCAGTAACATTCGGGGAGGGGCAACGATCGATTACC
AAGCTGATTAACTTCTTGGTAGTAGATTGCCTTCCGACGTATAACGCTGTCCGCATAGCCGGGTCGAGCCTTTACTCCCCTGTTCAATGTCTGCACGGCCGGGTCGAGCC
TTCACTCCCCGATCCAATGTCCACACGGCCTGTGTCTGCACGGCCGAGTCGAGCCTTCACTCCCCGGTCCAGTGTTCGCACGGTTGGGCCAAGCCCATACACCCCAATCC
GATGTCCGCATGGTCGGGTCGAGCCCACGCTCGAAAGTGATTACTTACCTATGCAAAGCATAGACCAGGGAACAAGAGCTAGCCGCGAGTACAGACGTGACTACAGGGAT
GCCAAGAAGACGAAACCTCGTAGCCTCTTGTCTTGGCCGAGGCCGAGCATGTGA
Protein sequenceShow/hide protein sequence
MNRGMYSLRFSNNQFNLEFTEEEAAGIHHPHNDALVVTLTIANARVHRVLIDGGSSADVLSTTAFEVMKLGKDHLKPSLTPLIGFGGEKVSPEGSIELPVTFGEGQRSIT
KLINFLVVDCLPTYNAVRIAGSSLYSPVQCLHGRVEPSLPDPMSTRPVSARPSRAFTPRSSVRTVGPSPYTPIRCPHGRVEPTLESDYLPMQSIDQGTRASREYRRDYRD
AKKTKPRSLLSWPRPSM