; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy11g016100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g016100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr11:38830512..38831421
RNA-Seq ExpressionLcy11g016100
SyntenyLcy11g016100
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO64639.1 reverse transcriptase [Corchorus capsularis]1.1e-6247.91Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR RN ILG+ED  G W T  A V ++   Y+ ++F S NP  + L+ VL  +P ++  +M   L APF    ++  V      KAPG DGFP  FYQK 
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W+TVG  V+   L  LN   S+   NHTNI LIPK+ N R + D+RPI+LCNV +KI++  IANRL L+L  II E QSAF+P R I DN ++  ET HF
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +  KR GK  + ALKLD+SKAYD VEWI+++K M +L     WI+LVM+ I S ++SI++NG+
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]5.3e-6247.15Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR +NRI G+ + QGVW  +   +  +   YF+ IF+S NP   + +  L  I  +V+ EMN  L+A F  E+V   ++  H TKAPG DG   IFYQKY
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W  V P V+   LA+LN        N T I LIPK+ + + ++++RPISLCNV YKI++ V+ANRL  VL ++IDE QSAF+PGRSI DN+++  ET H+
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        + ++++GK    A+KLDMSKAYD VEW Y++ I+ KL  HE WI L+M C+S+ T+S+++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]6.1e-6649.43Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR RN I G+ D  G W   T  +  V   YF  I+ S  P    ++ VLD IP  VT EMNH L+  F RE++E  +   H TKAPG DG   IF+QKY
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        WN VG  +V   L +LN   S+   N TNI L+PK+ N   +SD+RPISLCNV YK+++ V+ANRL  +L  II E QSAF+ GR I+DN+++  E  H+
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGEVY
        L+ K+ GK G+AA+KLDMSKAYD VEW +I+++M K+  HE WI+LVM CI+S ++SI++NG  Y
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGEVY

XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]3.7e-6346.95Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR +NRI G+ED  GVW  +   V  +F  YF +IF + +P    LNA L+ +P KV+ EMN++L   F +E++   +     TKAPGLDG P  F+QK+
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W++V   VV+ CL ILN   ++   NHT IAL+PK+S  R V+++RPI+LCNV Y+IV   IANRL +VLNDII   QSAF+P R I+DN+I+G+E  + 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNG
        +++ R  + G  A+KLD+SKAYD VEW +++  M KL      + LVM+CIS+ +FS+++NG
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNG

XP_030939696.1 uncharacterized protein LOC115964548 [Quercus lobata]9.1e-6246.77Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        R+ RN I G+ D++GVW +E A    +   ++ ++F + NP+  NL  VL+ I   V+ +MN +L AP+  E+VE  +K     KAPG DG P +FYQ Y
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W  VG  +  A L+ LN+   +K+ NHT I LIPK+ N   VS++RPISLCNV YKIV+ VIANRL  +LN II E QSAFI  R I+DN+++  E+ H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +K     K G+ ALKLDMSKAYD VEW +++KI+ K+     W+ L+M+CI++ ++SI++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

TrEMBL top hitse value%identityAlignment
A0A2N9E9A1 Reverse transcriptase domain-containing protein2.4e-6850.19Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR RNRIL ++DS G W     +V  VF  ++ D+F S NP  + +  V++ IPR VTSEMNH L   F   +V   VK     K+PG DGFP IFYQKY
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W+ +G  V  A L  LN    +KA NHT+I LIPK+ N   V D+RPISLCNV YKI++ V+ NRL  +L  I+ E QSAF+PGR I+DN+++  ET H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        + ++RRGK G  ALKLDMSKAYD VEW Y++++M ++  HE W++++M+CIS+ ++SI++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

A0A2N9EDY7 Reverse transcriptase domain-containing protein2.1e-6446.39Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR RNRI+G++D QGVW  E ++   +  Q+F  IFR+  P  +N+   + H+P  ++ E+N  L + F  ++VE  +K     KAPG DG P +F+QKY
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W  VGP V    L+ LN    +   NHT I LIPK+ N   ++++RPISLCNV+YK+++ VIANRL  +L  II E QSAF+PGR I+DN+++  ET H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +   + GK G  A+KLDMSKAYD VEW +++KIM K+  H  W+ L+M+CIS+ ++SI++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

A0A2N9GPZ7 Reverse transcriptase domain-containing protein2.5e-6547.53Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR  N I G+ D  GVW TE  K+ ++   YF  IF S NP  +++  VL  +   VT+ MN +L A F +++V   +K  + TKAPG DG   IFYQ Y
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W+ VGP V  A L+IL+    ++  N+T+IALIPK+ N   ++D+RPISLCNV YKIV+ V+ANRL  VL  +I E QSAF+PGR I+DN+++  E  H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +  KR+GK G  ALKLDMSKAYD VEW++++ IM  +   ++WI+L+M C+ S ++S+++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

A0A2N9I335 Reverse transcriptase domain-containing protein1.9e-6547.91Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR  N I G+ D++GV  T+  K+ ++   YF  IF S NP  + +N+ LD + R VT EMN+ L+  F  E+V + +K  + TKAPG DG   +FYQ Y
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W+ VGP V  A L+IL+    +   N+T+IALIPK+ N   ++D+RPISLCNV YKIV+ ++ANRL  VL  +I E QSAF+PGR I+DN+++  E  H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +  KR G+ G  ALKLDMSKAYD VEW++++ IM +L   EDWI L+M C+ S ++S+++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

A0A2N9IPS8 Reverse transcriptase domain-containing protein2.5e-6547.53Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY
        RR  N I G+ D  GVW TE  K+ ++   YF  IF S NP  +++  VL  +   VT+ MN +L A F +++V   +K  + TKAPG DG   IFYQ Y
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKY

Query:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF
        W+ VGP V  A L+IL+    ++  N+T+IALIPK+ N   ++D+RPISLCNV YKIV+ V+ANRL  VL  +I E QSAF+PGR I+DN+++  E  H 
Subjt:  WNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHF

Query:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        +  KR+GK G  ALKLDMSKAYD VEW++++ IM  +   ++WI+L+M C+ S ++S+++NGE
Subjt:  LKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.0e-2023.97Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQ
        +R +N+I  +++ +G   T+  ++     +Y+  ++ ++   ++ ++  LD   +PR +  E    L  P    ++  ++ +    K+PG DGF   FYQ
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQ

Query:  KYWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLS-NARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHET
        +Y   + P ++    +I        ++   +I LIPK   +     ++RPISL N+  KI+  ++ANR+   +  +I   Q  FIPG     N+    ++
Subjt:  KYWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLS-NARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHET

Query:  SHFLKKKRRGK-IGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
         + ++   R K   +  + +D  KA+D ++  ++ K +NKL +   +++++      PT +II+NG+
Subjt:  SHFLKKKRRGK-IGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

P08548 LINE-1 reverse transcriptase homolog3.4e-1924.81Show/hide
Query:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQ
        +R ++ I  + +      T+ +++  +  +Y+  ++  +   +  ++  L+  H+PR    E+   L  P    ++   ++N    K+PG DGF + FYQ
Subjt:  RRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQ

Query:  KYWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKL-SNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILG-HE
         +   + P ++N    I         +   NI LIPK   +     +YRPISL N+  KI+  ++ NR+   +  II   Q  FIPG     N+    + 
Subjt:  KYWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKL-SNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILG-HE

Query:  TSHFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNG
          H  K K +    +  L +D  KA+D ++  ++ + + K+ +   +++L+    S PT +II+NG
Subjt:  TSHFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNG

P11369 LINE-1 retrotransposable element ORF2 protein1.7e-1823.4Show/hide
Query:  RSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQK
        R +  I  + + +G   T+  ++ +    ++  ++ ++   +D ++  LD   +P+    +++H L +P   +++E V+ +    K+PG DGF   FYQ 
Subjt:  RSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLD--HIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQK

Query:  YWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPK-LSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETS
        +   + P +      I        ++    I LIPK   +   + ++RPISL N+  KI+  ++ANR+   +  II   Q  FIPG     N+       
Subjt:  YWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPK-LSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETS

Query:  HFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE
        H++ K +     +  + LD  KA+D ++  ++ K++ +  +   ++ ++    S P  +I +NGE
Subjt:  HFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGE

P14381 Transposon TX1 uncharacterized 149 kDa protein3.6e-2129.95Show/hide
Query:  VHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKYWNTVGPTVVNACLAILNWTDSIK
        + D    ++ ++F       D    + D +P  V+     RL  P   +++ + ++     K+PGLDG    F+Q +W+T+GP             +   
Subjt:  VHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKYWNTVGPTVVNACLAILNWTDSIK

Query:  AWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHFLKKKRRGKIGYAALKLDMSKAYD
        +     ++L+PK  + RL+ ++RP+SL +  YKIV   I+ RL  VL ++I   QS  +PGR+I DN+ L  +  HF    RR  +  A L LD  KA+D
Subjt:  AWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHFLKKKRRGKIGYAALKLDMSKAYD

Query:  WVEWIYI
         V+  Y+
Subjt:  WVEWIYI

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.5e-0925.62Show/hide
Query:  RSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKV--DNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQK
        +++N I  +     V      +V ++   Y+  +  S +  +  D++  + D  P +    +  RL A    +++   V      KAPG D F   F+ +
Subjt:  RSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKV--DNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQK

Query:  YWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVT
         W  V  + + A          +K +N T I LIPK++    +S +RP+S C V YKI+T
Subjt:  YWNTVGPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVT

AT4G20520.1 RNA binding;RNA-directed DNA polymerases4.3e-0933.73Show/hide
Query:  IANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWI
        +  RL  ++ ++I   Q++FIPGR  +DN++   E  H +++K +G  G+  LKLD+ KAYD + W Y++  +      E W+
Subjt:  IANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHFLKKKRRGKIGYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGTAGTCGGAATCGTATTCTTGGTGTGGAGGATTCACAAGGAGTCTGGCATACGGAGACAGCAAAGGTACATGATGTTTTTGAACAATATTTTGCTGAT
ATCTTTCGTTCTAGGAATCCTAAGGTGGACAACCTGAATGCAGTCCTGGATCATATTCCAAGGAAAGTTACCTCTGAGATGAACCACCGTTTGATGGCCCCTTTC
CCAAGGGAGAAGGTGGAAAGGGTAGTGAAGAACTTTCATCTGACCAAGGCTCCCGGTCTGGATGGTTTCCCTACTATTTTCTATCAGAAATATTGGAATACAGTG
GGTCCAACAGTGGTGAATGCCTGCCTGGCTATTCTTAACTGGACTGATTCGATCAAAGCCTGGAACCACACAAACATTGCACTCATTCCAAAGCTCTCCAATGCA
AGGTTAGTATCGGACTATCGCCCCATTAGTCTCTGTAACGTCTCTTATAAGATTGTCACTACAGTCATTGCCAACAGACTTTGTCTAGTGTTAAATGATATTATT
GATGAAGGGCAGTCGGCTTTTATTCCCGGTAGATCTATATCTGATAATATGATTTTAGGACATGAAACGTCACATTTCTTAAAGAAGAAGCGCAGGGGAAAGATT
GGGTACGCTGCTCTGAAATTAGATATGAGTAAAGCGTACGATTGGGTAGAATGGATTTACATCCAGAAGATTATGAATAAACTGAGACTTCATGAAGATTGGATA
CAATTGGTTATGGATTGTATTTCAAGTCCAACATTCTCTATTATAATGAATGGGGAGGTCTATTGGCTATGCTTGATTCGGCTAGACATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCGTAGTCGGAATCGTATTCTTGGTGTGGAGGATTCACAAGGAGTCTGGCATACGGAGACAGCAAAGGTACATGATGTTTTTGAACAATATTTTGCTGAT
ATCTTTCGTTCTAGGAATCCTAAGGTGGACAACCTGAATGCAGTCCTGGATCATATTCCAAGGAAAGTTACCTCTGAGATGAACCACCGTTTGATGGCCCCTTTC
CCAAGGGAGAAGGTGGAAAGGGTAGTGAAGAACTTTCATCTGACCAAGGCTCCCGGTCTGGATGGTTTCCCTACTATTTTCTATCAGAAATATTGGAATACAGTG
GGTCCAACAGTGGTGAATGCCTGCCTGGCTATTCTTAACTGGACTGATTCGATCAAAGCCTGGAACCACACAAACATTGCACTCATTCCAAAGCTCTCCAATGCA
AGGTTAGTATCGGACTATCGCCCCATTAGTCTCTGTAACGTCTCTTATAAGATTGTCACTACAGTCATTGCCAACAGACTTTGTCTAGTGTTAAATGATATTATT
GATGAAGGGCAGTCGGCTTTTATTCCCGGTAGATCTATATCTGATAATATGATTTTAGGACATGAAACGTCACATTTCTTAAAGAAGAAGCGCAGGGGAAAGATT
GGGTACGCTGCTCTGAAATTAGATATGAGTAAAGCGTACGATTGGGTAGAATGGATTTACATCCAGAAGATTATGAATAAACTGAGACTTCATGAAGATTGGATA
CAATTGGTTATGGATTGTATTTCAAGTCCAACATTCTCTATTATAATGAATGGGGAGGTCTATTGGCTATGCTTGATTCGGCTAGACATATAG
Protein sequenceShow/hide protein sequence
MRRSRNRILGVEDSQGVWHTETAKVHDVFEQYFADIFRSRNPKVDNLNAVLDHIPRKVTSEMNHRLMAPFPREKVERVVKNFHLTKAPGLDGFPTIFYQKYWNTV
GPTVVNACLAILNWTDSIKAWNHTNIALIPKLSNARLVSDYRPISLCNVSYKIVTTVIANRLCLVLNDIIDEGQSAFIPGRSISDNMILGHETSHFLKKKRRGKI
GYAALKLDMSKAYDWVEWIYIQKIMNKLRLHEDWIQLVMDCISSPTFSIIMNGEVYWLCLIRLDI