; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy12g001030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy12g001030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description2-isopropylmalate synthase
Genome locationChr12:1477083..1477673
RNA-Seq ExpressionLcy12g001030
SyntenyLcy12g001030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607491.1 hypothetical protein SDJN03_00833, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8081.96Show/hide
Query:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL
        +TP+IMKRLYCLLLQ SL E L LSRNEAAL+ELNKEFSQ G ++SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLL
Subjt:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL

Query:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        LRSCLVILTL+ FEQN +LEK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
Subjt:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

KAG7037150.1 hypothetical protein SDJN02_00772, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-8081.96Show/hide
Query:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL
        +TP+IMKRLYCLLLQ SL E L LSRNEAAL+ELNKEFSQ G ++SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLL
Subjt:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL

Query:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        LRSCLVILTL+ FEQN +LEK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
Subjt:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

XP_022949475.1 uncharacterized protein LOC111452808 [Cucurbita moschata]4.6e-7680.95Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL E L  SRNEAAL+ELNKEF Q G  +SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN +LEK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTFVSE+FVASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

XP_022998345.1 uncharacterized protein LOC111493012 [Cucurbita maxima]3.2e-7781.48Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL E L LSRNEAAL+ELNKEFSQ G ++SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN + EK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTF+SEDFVASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

XP_023525754.1 uncharacterized protein LOC111789268 [Cucurbita pepo subsp. pepo]1.0e-7580.95Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL E L LSRNEAAL++LNKE  Q G  +SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN +LEK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

TrEMBL top hitse value%identityAlignment
A0A5A7T6X6 Uncharacterized protein5.5e-7577.32Show/hide
Query:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL
        +TP++MKR+Y LLLQLSL EQ DLSR EAAL ELN EF ++GFKES +DF GLAD LFKELDRRFK VF DL ++SF  SPE+A KDNDLW+T+EEFMLL
Subjt:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL

Query:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        LRSCLVI+TL+ FEQ+ALLEK   LL VLRKLL+LI +GKEEKESISLEKS LHEC+IT SDCTTFVSED  ASLCILEPSDPCHPFICAVLEV
Subjt:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

A0A5D3BNT8 Uncharacterized protein5.5e-7577.32Show/hide
Query:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL
        +TP++MKR+Y LLLQLSL EQ DLSR EAAL ELN EF ++GFKES +DF GLAD LFKELDRRFK VF DL ++SF  SPE+A KDNDLW+T+EEFMLL
Subjt:  MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLL

Query:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        LRSCLVI+TL+ FEQ+ALLEK   LL VLRKLL+LI +GKEEKESISLEKS LHEC+IT SDCTTFVSED  ASLCILEPSDPCHPFICAVLEV
Subjt:  LRSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

A0A6J1DR48 uncharacterized protein LOC1110223828.5e-7679.89Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL+E LD S  EA+ IELNKE ++ GF+ SF DFCGLADFLFKELD  FKRVFHDL SISF  SPELAR+DNDLW+T++EF+LLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN LLEKG  LL V+RKLL LI SGK+EKESISLEKS LHECRIT+SDCTTFVSED VASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

A0A6J1GCV5 uncharacterized protein LOC1114528082.2e-7680.95Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL E L  SRNEAAL+ELNKEF Q G  +SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN +LEK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTFVSE+FVASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

A0A6J1KC87 uncharacterized protein LOC1114930121.6e-7781.48Show/hide
Query:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL
        MKRLYCLLLQ SL E L LSRNEAAL+ELNKEFSQ G ++SF+D C LADFLFKELDRRFKRVF+DL +ISF +SPE ARKDNDLWN+++EFMLLLRSCL
Subjt:  MKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCL

Query:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        VILTL+ FEQN + EK   LL VLRKLLYLI SGKEEKESISLEK  LHECRITE DCTTF+SEDFVASLCILEPSDPCHPFICAVLEV
Subjt:  VILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27510.1 unknown protein1.3e-0730.05Show/hide
Query:  IMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKE---SFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLL
        I+KRL CLL  LSL +  +    + A    N +F   G K    +F D C L+D LF ELDR  + +F  L    F    E         +++E   L L
Subjt:  IMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKE---SFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLL

Query:  RSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        + C+ I++LL  +Q  +LEK   LL +L +L+                       R    DC+   + D   SL      DP H F+C  +EV
Subjt:  RSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV

AT4G27510.2 unknown protein1.3e-0730.05Show/hide
Query:  IMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKE---SFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLL
        I+KRL CLL  LSL +  +    + A    N +F   G K    +F D C L+D LF ELDR  + +F  L    F    E         +++E   L L
Subjt:  IMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKE---SFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLL

Query:  RSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV
        + C+ I++LL  +Q  +LEK   LL +L +L+                       R    DC+   + D   SL      DP H F+C  +EV
Subjt:  RSCLVILTLLPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCCTCCATAATGAAACGTTTGTACTGCCTCCTGCTTCAGTTGTCTTTAAATGAACAGTTGGATTTGTCTAGAAATGAAGCTGCCTTGATTGAGTTGAACAAAGA
ATTTAGTCAGTATGGATTCAAGGAAAGTTTTCAGGATTTTTGTGGTCTGGCAGATTTTTTGTTCAAAGAACTTGATCGGAGATTTAAGCGAGTTTTCCATGATTTGGGAA
GTATTTCCTTCGGCCTCTCTCCTGAACTTGCTCGTAAAGATAATGATTTGTGGAATACCATGGAAGAGTTTATGTTGCTCTTAAGAAGTTGTTTGGTTATCTTGACTCTG
CTTCCTTTCGAACAAAATGCTCTACTGGAAAAGGGCAGTGCTCTTCTTTTAGTACTCAGGAAATTGCTCTATTTGATTAGAAGTGGAAAGGAGGAGAAAGAGTCCATCAG
CTTGGAGAAGTCTATTTTACACGAATGCAGAATCACTGAATCTGATTGTACCACCTTTGTCTCTGAGGATTTTGTTGCTTCCTTGTGTATTTTAGAACCTTCTGATCCAT
GCCATCCATTCATATGTGCAGTCCTTGAGGTTCTTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCCTCCATAATGAAACGTTTGTACTGCCTCCTGCTTCAGTTGTCTTTAAATGAACAGTTGGATTTGTCTAGAAATGAAGCTGCCTTGATTGAGTTGAACAAAGA
ATTTAGTCAGTATGGATTCAAGGAAAGTTTTCAGGATTTTTGTGGTCTGGCAGATTTTTTGTTCAAAGAACTTGATCGGAGATTTAAGCGAGTTTTCCATGATTTGGGAA
GTATTTCCTTCGGCCTCTCTCCTGAACTTGCTCGTAAAGATAATGATTTGTGGAATACCATGGAAGAGTTTATGTTGCTCTTAAGAAGTTGTTTGGTTATCTTGACTCTG
CTTCCTTTCGAACAAAATGCTCTACTGGAAAAGGGCAGTGCTCTTCTTTTAGTACTCAGGAAATTGCTCTATTTGATTAGAAGTGGAAAGGAGGAGAAAGAGTCCATCAG
CTTGGAGAAGTCTATTTTACACGAATGCAGAATCACTGAATCTGATTGTACCACCTTTGTCTCTGAGGATTTTGTTGCTTCCTTGTGTATTTTAGAACCTTCTGATCCAT
GCCATCCATTCATATGTGCAGTCCTTGAGGTTCTTACATAA
Protein sequenceShow/hide protein sequence
MTPSIMKRLYCLLLQLSLNEQLDLSRNEAALIELNKEFSQYGFKESFQDFCGLADFLFKELDRRFKRVFHDLGSISFGLSPELARKDNDLWNTMEEFMLLLRSCLVILTL
LPFEQNALLEKGSALLLVLRKLLYLIRSGKEEKESISLEKSILHECRITESDCTTFVSEDFVASLCILEPSDPCHPFICAVLEVLT