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Lcy12g002000 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy12g002000
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransposase
Genome locationChr12:4853393..4968010
RNA-Seq ExpressionLcy12g002000
SyntenyLcy12g002000
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053557.1 hypothetical protein E6C27_scaffold190G001230 [Cucumis melo var. makuwa]8.7e-3848.47Show/hide
Query:  EDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQAKTVLCTLGM
        E++D+ ++  M   AH+  + +   FE++L+DA+KPLY  CK F+K+STLVKLYNL  + GW+++SF ELL  +KDILPSPN++ TS Y+ K +L  LGM
Subjt:  EDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQAKTVLCTLGM

Query:  SVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVKAQIPEHNSYNDSWK
          EKIHAC NDCCL+RKD+++  VCP CG SRWK     KD  K  ++  +   H + + +WK
Subjt:  SVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVKAQIPEHNSYNDSWK

XP_022145911.1 uncharacterized protein LOC111015258 [Momordica charantia]6.8e-4359.75Show/hide
Query:  SSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQ
        ++ GKE+   +DD I +   MF AA DY +N+S  FE+VL DA+KPLYS+ KNF+K+  L+KLYNL  K+G +D SFTELLTLV DILP PNEI  S Y+
Subjt:  SSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQ

Query:  AKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
        AK  L TLGM  E IHAC NDCCLFRKD SDV+ CP C  SRWKL KNSK+  K +  K
Subjt:  AKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

XP_022150919.1 uncharacterized protein LOC111018955 [Momordica charantia]3.6e-5264.24Show/hide
Query:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI
        RN  ++S+S +E++  EDDD DD IGMF AA+DY +N    FEE+L DAKKPLY NCKNF+KI  L+KLYNL  KFGW+D SFTELL LV+D+LPSPNEI
Subjt:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI

Query:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
          S YQAK  LCTLGM  EKIHAC  DCCLFRK+ SD + C  CG SRWK RK+SK+ MKN+  K
Subjt:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

XP_022155369.1 uncharacterized protein LOC111022513 [Momordica charantia]2.8e-5265.62Show/hide
Query:  VSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTY
        +S+S +EE+  +DDD DD IGMF AA+DY ++    FEE+L DAKKPLY NCKNF+KIS L+KLYNL  KFGW+D SFTELL LV+D+LPSPNEI  S Y
Subjt:  VSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTY

Query:  QAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
        QAK  LC LGM  EKIHAC  DCCLFRK+ SD + CP CG SRWKLRK+SK+ MKN+  K
Subjt:  QAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

XP_022158786.1 uncharacterized protein LOC111025252 [Momordica charantia]1.1e-5164.24Show/hide
Query:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI
        RN  ++S+S +EE+   DDD DD IG F AA+DY ++    FEE+L DAKKPLY NCKNF+KIS L+KLYNL  KFGW+D SFT+LL LV D+LPSPNEI
Subjt:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI

Query:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
          S YQAK  LCTLGM  EKIHAC  DCCLFRK+ SD + CP CG SRWKLRK+SK+ MKN+  K
Subjt:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

TrEMBL top hitse value%identityAlignment
A0A5A7UGF3 DUF4216 domain-containing protein4.2e-3848.47Show/hide
Query:  EDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQAKTVLCTLGM
        E++D+ ++  M   AH+  + +   FE++L+DA+KPLY  CK F+K+STLVKLYNL  + GW+++SF ELL  +KDILPSPN++ TS Y+ K +L  LGM
Subjt:  EDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQAKTVLCTLGM

Query:  SVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVKAQIPEHNSYNDSWK
          EKIHAC NDCCL+RKD+++  VCP CG SRWK     KD  K  ++  +   H + + +WK
Subjt:  SVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVKAQIPEHNSYNDSWK

A0A6J1CXT3 uncharacterized protein LOC1110152583.3e-4359.75Show/hide
Query:  SSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQ
        ++ GKE+   +DD I +   MF AA DY +N+S  FE+VL DA+KPLYS+ KNF+K+  L+KLYNL  K+G +D SFTELLTLV DILP PNEI  S Y+
Subjt:  SSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTYQ

Query:  AKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
        AK  L TLGM  E IHAC NDCCLFRKD SDV+ CP C  SRWKL KNSK+  K +  K
Subjt:  AKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

A0A6J1DBH3 uncharacterized protein LOC1110189551.8e-5264.24Show/hide
Query:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI
        RN  ++S+S +E++  EDDD DD IGMF AA+DY +N    FEE+L DAKKPLY NCKNF+KI  L+KLYNL  KFGW+D SFTELL LV+D+LPSPNEI
Subjt:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI

Query:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
          S YQAK  LCTLGM  EKIHAC  DCCLFRK+ SD + C  CG SRWK RK+SK+ MKN+  K
Subjt:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

A0A6J1DQ29 uncharacterized protein LOC1110225131.3e-5265.62Show/hide
Query:  VSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTY
        +S+S +EE+  +DDD DD IGMF AA+DY ++    FEE+L DAKKPLY NCKNF+KIS L+KLYNL  KFGW+D SFTELL LV+D+LPSPNEI  S Y
Subjt:  VSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEILTSTY

Query:  QAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
        QAK  LC LGM  EKIHAC  DCCLFRK+ SD + CP CG SRWKLRK+SK+ MKN+  K
Subjt:  QAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

A0A6J1E201 uncharacterized protein LOC1110252525.1e-5264.24Show/hide
Query:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI
        RN  ++S+S +EE+   DDD DD IG F AA+DY ++    FEE+L DAKKPLY NCKNF+KIS L+KLYNL  KFGW+D SFT+LL LV D+LPSPNEI
Subjt:  RNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPSPNEI

Query:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK
          S YQAK  LCTLGM  EKIHAC  DCCLFRK+ SD + CP CG SRWKLRK+SK+ MKN+  K
Subjt:  LTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCGGTGTGTGACTGCAAAGTCTCAAGATTCAAATACAAGAAATAATGCAAACGTCTCTTCTAGTGGAAAAGAAGAAATTGAGGATGAAGATGATGATATTGATGA
CGTAATAGGAATGTTTAATGCTGCACATGATTACGTTAACAATGAATCCCACGTTTTTGAGGAAGTACTAGATGATGCCAAGAAACCATTGTACTCAAATTGTAAGAACT
TTTCCAAAATATCTACATTGGTAAAGTTATATAATTTGAATAGAAAATTTGGATGGACCGATGTAAGTTTTACTGAATTGTTGACATTAGTCAAAGATATCTTACCAAGT
CCAAATGAAATTCTAACTTCTACGTATCAAGCAAAAACGGTTTTGTGTACTCTTGGAATGTCTGTAGAAAAGATTCATGCATGTAGCAACGATTGTTGTTTGTTTAGAAA
AGACCACTCAGATGTAGAAGTATGCCCAAGTTGTGGAATATCAAGATGGAAACTTCGTAAAAATTCGAAGGATGTGATGAAAAATATTAGAGTGAAAGCGCAGATCCCAG
AGCATAATTCGTACAATGATAGCTGGAAAGATGACCGCCCTGACGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCGGTGTGTGACTGCAAAGTCTCAAGATTCAAATACAAGAAATAATGCAAACGTCTCTTCTAGTGGAAAAGAAGAAATTGAGGATGAAGATGATGATATTGATGA
CGTAATAGGAATGTTTAATGCTGCACATGATTACGTTAACAATGAATCCCACGTTTTTGAGGAAGTACTAGATGATGCCAAGAAACCATTGTACTCAAATTGTAAGAACT
TTTCCAAAATATCTACATTGGTAAAGTTATATAATTTGAATAGAAAATTTGGATGGACCGATGTAAGTTTTACTGAATTGTTGACATTAGTCAAAGATATCTTACCAAGT
CCAAATGAAATTCTAACTTCTACGTATCAAGCAAAAACGGTTTTGTGTACTCTTGGAATGTCTGTAGAAAAGATTCATGCATGTAGCAACGATTGTTGTTTGTTTAGAAA
AGACCACTCAGATGTAGAAGTATGCCCAAGTTGTGGAATATCAAGATGGAAACTTCGTAAAAATTCGAAGGATGTGATGAAAAATATTAGAGTGAAAGCGCAGATCCCAG
AGCATAATTCGTACAATGATAGCTGGAAAGATGACCGCCCTGACGTATGA
Protein sequenceShow/hide protein sequence
MSRCVTAKSQDSNTRNNANVSSSGKEEIEDEDDDIDDVIGMFNAAHDYVNNESHVFEEVLDDAKKPLYSNCKNFSKISTLVKLYNLNRKFGWTDVSFTELLTLVKDILPS
PNEILTSTYQAKTVLCTLGMSVEKIHACSNDCCLFRKDHSDVEVCPSCGISRWKLRKNSKDVMKNIRVKAQIPEHNSYNDSWKDDRPDV