CuGenDBv2

Gene ID	Lcy12g005100
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein Ycf2-like
Genome location	Chr12:19402845..19407691
RNA-Seq Expression	Lcy12g005100
Synteny	Lcy12g005100
Gene Ontology terms	NA
InterPro domains	IPR015410 - Domain of unknown function DUF1985

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.1e-17

38.73

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                           S+ 
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST

Query:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
         N FA ++   + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.7e-18

39.16

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG--------------------------------------------SS
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                            S+
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG--------------------------------------------SS

Query:  TKNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
          N FA ++S  + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  TKNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.1e-17

38.73

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                           S+ 
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST

Query:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
         N FA ++   + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

TYK26024.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.6e-19

49.06

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG     +    M+  +        RIINWAADTQPKWKDL ++VF+S
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES

Query:  SKGAVS
            VS
Subjt:  SKGAVS

TYK29864.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.6e-19

49.06

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG     +    M+  +        RIINWAADTQPKWKDL ++VF+S
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES

Query:  SKGAVS
            VS
Subjt:  SKGAVS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U6E1 Protein Ycf2-like

5.4e-18

38.73

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                           S+ 
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST

Query:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
         N FA ++   + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

A0A5D3CEX9 Protein Ycf2-like

8.3e-19

39.16

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG--------------------------------------------SS
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                            S+
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG--------------------------------------------SS

Query:  TKNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
          N FA ++S  + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  TKNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

A0A5D3DKA6 Protein Ycf2-like

5.4e-18

38.73

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG                                           S+ 
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWG-------------------------------------------SST

Query:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS
         N FA ++   + RIINWAADTQPKWKDL ++VF+S    VS
Subjt:  KNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVS

A0A5D3DR12 Protein Ycf2-like

7.5e-20

49.06

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG     +    M+  +        RIINWAADTQPKWKDL ++VF+S
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES

Query:  SKGAVS
            VS
Subjt:  SKGAVS

A0A5D3E1W7 Protein Ycf2-like

7.5e-20

49.06

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Query:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES
        F+++   TDDD +K++ LYFLESFL+P+Q+ ++VD +HI MVDD+E+F+ YPWG     +    M+  +        RIINWAADTQPKWKDL ++VF+S
Subjt:  FHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRIL-------RIINWAADTQPKWKDLDRRVFES

Query:  SKGAVS
            VS
Subjt:  SKGAVS

SwissProt top hits

e value

%identity

Alignment

A0A0P0X9Z7 Cysteine-tryptophan domain-containing zinc finger protein 7

6.6e-05

47.17

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Query:  VTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPSNLSHTINQQR
        V     DEKI+  LGH+ KD EG V A+NLGSKFG Y    P+     + Q R
Subjt:  VTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPSNLSHTINQQR

Q0DIQ5 Cysteine-tryptophan domain-containing zinc finger protein 5

1.9e-04

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Query:  HCVYRLCVTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPS
        H +  L VT    DEK++  LGH+ K+ EGGV A+NLGS++G Y    P+
Subjt:  HCVYRLCVTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPS

Arabidopsis top hits

e value

%identity

Alignment

AT1G02990.3 FUNCTIONS IN: molecular_function unknown

5.5e-07

34.91

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Query:  DFEDEVHCVYRLC----VTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPSNLSHTINQQRECNAAPSRDNVPLEGQDLGERWASGEEELM
        DFE+E    Y  C    V     DEK++  LGH+ KD EGGV A+NLG+KFG Y        S     QR    +  + +  ++   LG R       L+
Subjt:  DFEDEVHCVYRLC----VTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPSNLSHTINQQRECNAAPSRDNVPLEGQDLGERWASGEEELM

Query:  QRLSSS
         +LS S
Subjt:  QRLSSS

AT2G07240.1 cysteine-type peptidases;cysteine-type peptidases

2.0e-04

32.84

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Query:  REVSLLY----FLESFLLPRQDNVNVDMEHIEMVDDEELFNNYPWGRCAYELLLSYMHKALVSKGAT
        RE+ L Y     ++ FLLP      +  +H EM +D + F +YPWGR ++E++++ + +  V + AT
Subjt:  REVSLLY----FLESFLLPRQDNVNVDMEHIEMVDDEELFNNYPWGRCAYELLLSYMHKALVSKGAT

AT3G62900.1 CW-type Zinc Finger

4.7e-06

39.29

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Query:  DFEDEVHCVYRLCVTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPS
        D ++++  +     +  L DEK++  LGH+ KD EGGV A+NLG+K+G Y    P+
Subjt:  DFEDEVHCVYRLCVTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPS

Sequences

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CDS sequence

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ATGACTTTTCACGTGAACAAAAATGTAACTGATGACGACATGCTGAAGGTATCACTCCTATATTTCTTGGAAAGCTTCCTTCTTCCAAGACAAGACAACGTAAATGTTGA
TATTGAGCACATCAAGATGGTTGATGATGAAGAACTGTTCAACAATTACCCGTGGGGGAGCTCCACGAAAAATGTTTTTGCTCGGAAAATGTCTACACGCATCCTGCGCA
TCATAAACTGGGCTGCAGACACCCAACCCAAGTGGAAGGACCTAGATCGCAGAGTTTTCGAATCTTCAAAAGGGGCGGTATCAATGGTTGATGGGAAACGAATCAATGAT
GTTTTAGAGTTGATTACAAGCAGGTTGAATCTAATGGAGAAAAATCAAGAAATGATGAATGAGCAACTGGACGAGCTGGTTGGGAGCGTCAACCTAATGATCAATTATAT
GAAGAATAGACATGTGACAAAACTGAACGATTTTGAAGACGAAGTGCATTGTGTTTATAGACTATGTGTAACATTTAAACTGTATGATGAGAAGATCAAACGTTTTCTAG
GTCATTACCCAAAGGACATTGAAGGTGGAGTTTTAGCTAAAAACTTGGGGTCAAAGTTTGGTGATTATGACGATTGCCGCCCTTCCAATTTGTCACACACGATAAATCAA
CAAAGAGAATGCAATGCCGCACCATCTCGGGATAATGTGCCCTTGGAGGGTCAAGATTTGGGCGAACGGTGGGCTTCTGGAGAAGAAGAGTTGATGCAGCGGTTATCTTC
TTCCAATTTCTGTCGAACGCGAGAGGTATCACTCCTATATTTCTTGGAAAGCTTCCTTCTTCCAAGACAAGACAACGTAAATGTTGATATGGAGCACATCGAGATGGTTG
ATGATGAAGAGCTGTTCAACAATTACCCGTGGGGGAGGTGTGCATACGAGTTGCTGTTGTCCTACATGCACAAAGCCTTAGTCAGTAAGGGTGCTACGGATTTAACATTT
AATAGGGGGCGGTATCAATGGTTGATGGGAAACGAATCAATGATGTTCTGGAGTGATTACAAGCAGACAACTGACAGGTGTGAGGATGTGGAAGATGTCGTTAATGATGA
TCTAATTTGTTCAATTGATGAAAATGAGGTTTATGAATCTTACAAACGAGACCTACGAGGAAAAAGAGTGTTAAAGGGTGACCAACAACCATGTAGGGCGGTGCCCAGGC
TGGGAGTGCATAAGCCACCCACTGTAATCCGGAGTCTATCCCATCCATCAACTGAGATAAACACAAACATCGCGTCCACTAGAAAGCTGAAGACCTACAAACCTGTTGCA
CTAATCCCAAGCGTGCAACCAAGGAGGTTGCCTTTAAAAGAGGACCATGTGTATATTGATGCTCTCCGAGGGACTTGGCAAGCAAAGTACACACCTCTGCAAGCACCTTA
TGCAGAGGCTTTGGGTCGTGTCGTAGGTCCTGGGCAGTTACTCCTCTTTTCAACTGTGTGA

mRNA sequence

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Protein sequence

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MTFHVNKNVTDDDMLKVSLLYFLESFLLPRQDNVNVDIEHIKMVDDEELFNNYPWGSSTKNVFARKMSTRILRIINWAADTQPKWKDLDRRVFESSKGAVSMVDGKRIND
VLELITSRLNLMEKNQEMMNEQLDELVGSVNLMINYMKNRHVTKLNDFEDEVHCVYRLCVTFKLYDEKIKRFLGHYPKDIEGGVLAKNLGSKFGDYDDCRPSNLSHTINQ
QRECNAAPSRDNVPLEGQDLGERWASGEEELMQRLSSSNFCRTREVSLLYFLESFLLPRQDNVNVDMEHIEMVDDEELFNNYPWGRCAYELLLSYMHKALVSKGATDLTF
NRGRYQWLMGNESMMFWSDYKQTTDRCEDVEDVVNDDLICSIDENEVYESYKRDLRGKRVLKGDQQPCRAVPRLGVHKPPTVIRSLSHPSTEINTNIASTRKLKTYKPVA
LIPSVQPRRLPLKEDHVYIDALRGTWQAKYTPLQAPYAEALGRVVGPGQLLLFSTV

Lcy12g005100 (gene) of Sponge gourd (P93075) v1 genome