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Lcy12g005170 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy12g005170
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncucumber peeling cupredoxin-like
Genome locationChr12:19662089..19662931
RNA-Seq ExpressionLcy12g005170
SyntenyLcy12g005170
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037208.1 hypothetical protein SDJN02_00831, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4774.02Show/hide
Query:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRP
        MS + +  AS F LGALLH  VAVDH VGGD GWNLPPTPTFF EWARN TF+ ND+L+IKSR NE HDVA PKSQADFDGC+ P FV DF GFI L R 
Subjt:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRP

Query:  GRRYFISTMGNDCNAGMKFAIDVIPKL
        GR YFIS MGNDCNAGMKFAIDV+P L
Subjt:  GRRYFISTMGNDCNAGMKFAIDVIPKL

XP_004138540.1 cucumber peeling cupredoxin-like [Cucumis sativus]2.7e-4063.28Show/hide
Query:  MSTTT--SFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLN
        MSTTT  SF     +LG LLHV VAV+H+VGG+FGWNLP TPTFF +WA NRTFF +DKL+ +SR+NE H + QP SQADFDGC+ P FV     FI L+
Subjt:  MSTTT--SFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLN

Query:  RPGRRYFISTMGNDCNAGMKFAIDVIPK
        +P RRYF+ST G+DC AGMKFAI+++PK
Subjt:  RPGRRYFISTMGNDCNAGMKFAIDVIPK

XP_022156293.1 cucumber peeling cupredoxin-like [Momordica charantia]2.8e-4569.29Show/hide
Query:  MSTTTS-FHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNR
        M+TT S   A  F +GALLHVVVAVDHRVGGDFGWNLPP PTFF +WARNRTFF +DKL+ +S+AN  H +AQP+SQ DFDGC+  G V DF  FI  +R
Subjt:  MSTTTS-FHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNR

Query:  PGRRYFISTMGNDCNAGMKFAIDVIPK
        PGR YFIST GNDCNAGMKFAI+V+P+
Subjt:  PGRRYFISTMGNDCNAGMKFAIDVIPK

XP_023525370.1 cucumber peeling cupredoxin-like [Cucurbita pepo subsp. pepo]8.6e-4772.44Show/hide
Query:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRP
        MS + +  AS F LGALLH  VA+ H VGGD GWNLPPTPTFF EWARN TF+ ND+L+IKSR NE HDVA PKSQADFDGC+ P FV DF GFI L R 
Subjt:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRP

Query:  GRRYFISTMGNDCNAGMKFAIDVIPKL
        GR YFIS MGNDCNAGMKF IDV+PKL
Subjt:  GRRYFISTMGNDCNAGMKFAIDVIPKL

XP_038885967.1 cucumber peeling cupredoxin-like [Benincasa hispida]8.9e-4464.06Show/hide
Query:  STTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRPG
        ++ +SF    F LGAL+HV VAV+H+VGG+FGWNLP TPTFF +WA +R FF  DKL+ +SRANE H + QP+SQA+FDGC+ PGF  +   FI L+RPG
Subjt:  STTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRPG

Query:  RRYFISTMGNDCNAGMKFAIDVIPKLQT
        RRYFIST+GNDCNAGMKFA++V+PKL T
Subjt:  RRYFISTMGNDCNAGMKFAIDVIPKLQT

TrEMBL top hitse value%identityAlignment
A0A0A0KAM8 Phytocyanin domain-containing protein1.3e-4063.28Show/hide
Query:  MSTTT--SFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLN
        MSTTT  SF     +LG LLHV VAV+H+VGG+FGWNLP TPTFF +WA NRTFF +DKL+ +SR+NE H + QP SQADFDGC+ P FV     FI L+
Subjt:  MSTTT--SFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLN

Query:  RPGRRYFISTMGNDCNAGMKFAIDVIPK
        +P RRYF+ST G+DC AGMKFAI+++PK
Subjt:  RPGRRYFISTMGNDCNAGMKFAIDVIPK

A0A1S3CJW8 cucumber peeling cupredoxin-like2.2e-4061.72Show/hide
Query:  MSTTT--SF-HASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVL
        MSTTT  SF     F LGA++HV VAV+H+VGG+FGWNLP TPTFF +WA NRTFF NDKL+ +SR+NE H + QP+SQA+FDGCI PGF  +   +I L
Subjt:  MSTTT--SF-HASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVL

Query:  NRPGRRYFISTMGNDCNAGMKFAIDVIP
        ++P RRYF+ST+G+DC AGMKFA++++P
Subjt:  NRPGRRYFISTMGNDCNAGMKFAIDVIP

A0A5D3D4H3 Cucumber peeling cupredoxin-like2.2e-4061.72Show/hide
Query:  MSTTT--SF-HASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVL
        MSTTT  SF     F LGA++HV VAV+H+VGG+FGWNLP TPTFF +WA NRTFF NDKL+ +SR+NE H + QP+SQA+FDGCI PGF  +   +I L
Subjt:  MSTTT--SF-HASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVL

Query:  NRPGRRYFISTMGNDCNAGMKFAIDVIP
        ++P RRYF+ST+G+DC AGMKFA++++P
Subjt:  NRPGRRYFISTMGNDCNAGMKFAIDVIP

A0A6J1CVB4 umecyanin-like1.4e-3962.7Show/hide
Query:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPG--FVSDFFGFIVLN
        M+T  S  ASLF++GALLHVV AVDH VGGDFGWNLPP  TFF +W+R+RTF   DKLV +S+A E+HDVA+P SQADFDGC+ PG  F +     I L+
Subjt:  MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPG--FVSDFFGFIVLN

Query:  RPGRRYFISTMGNDCNAGMKFAIDVI
        RP RRYFI T+G+ CNAGMKF +D++
Subjt:  RPGRRYFISTMGNDCNAGMKFAIDVI

A0A6J1DQ85 cucumber peeling cupredoxin-like1.3e-4569.29Show/hide
Query:  MSTTTS-FHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNR
        M+TT S   A  F +GALLHVVVAVDHRVGGDFGWNLPP PTFF +WARNRTFF +DKL+ +S+AN  H +AQP+SQ DFDGC+  G V DF  FI  +R
Subjt:  MSTTTS-FHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNR

Query:  PGRRYFISTMGNDCNAGMKFAIDVIPK
        PGR YFIST GNDCNAGMKFAI+V+P+
Subjt:  PGRRYFISTMGNDCNAGMKFAIDVIPK

SwissProt top hitse value%identityAlignment
P29602 Cucumber peeling cupredoxin2.3e-1033.02Show/hide
Query:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS-----DFFGFIV--LNRPGRRYFISTMGNDCNAGMK
        H VG + GW++P +P F+ +WA  +TF   D L     AN AH+V + +++  FD C    FV+     +    ++  L+  G  YF+ T+G  C+ G K
Subjt:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS-----DFFGFIV--LNRPGRRYFISTMGNDCNAGMK

Query:  FAIDVI
         +I+V+
Subjt:  FAIDVI

P42849 Umecyanin3.6e-1136.89Show/hide
Query:  DHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFG---FIVLNRPGRRYFISTMGNDCNAGMKFAI
        D+ VGGD  W  P  P F+  WA  +TF   D+L     A   HDVA     A FD C     +S        I+LN  G +Y+I T+G+ C  G K +I
Subjt:  DHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFG---FIVLNRPGRRYFISTMGNDCNAGMKFAI

Query:  DVI
        +V+
Subjt:  DVI

Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers1.6e-0627.27Show/hide
Query:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS---DFFGFIVLNRPGRRYFISTMGNDCNAGMKFAID
        ++VG    W +  +  F++ W++ + F   D L+ +   NE + V +     +F  C P   ++        I L +PG  YFIS+    C AG+K  + 
Subjt:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS---DFFGFIVLNRPGRRYFISTMGNDCNAGMKFAID

Query:  V-----IPKL
        V     +PKL
Subjt:  V-----IPKL

AT1G45063.2 copper ion binding;electron carriers1.6e-0627.27Show/hide
Query:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS---DFFGFIVLNRPGRRYFISTMGNDCNAGMKFAID
        ++VG    W +  +  F++ W++ + F   D L+ +   NE + V +     +F  C P   ++        I L +PG  YFIS+    C AG+K  + 
Subjt:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVS---DFFGFIVLNRPGRRYFISTMGNDCNAGMKFAID

Query:  V-----IPKL
        V     +PKL
Subjt:  V-----IPKL

AT3G53330.1 plastocyanin-like domain-containing protein9.3e-0726.42Show/hide
Query:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDF---FGFIVLNRPGRRYFISTMGNDCNAGMKFAID
        +RVG   GW++  +  ++++W+  + F   D L  +    E +DV +   + +F  C     V+ +      I L +PG  YF+S     C AG+K  + 
Subjt:  HRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDF---FGFIVLNRPGRRYFISTMGNDCNAGMKFAID

Query:  VIPKLQ
        V P  +
Subjt:  VIPKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAACAACAAGTTTCCATGCTTCCCTCTTCATCCTCGGAGCTCTCCTACACGTTGTCGTCGCCGTCGACCACCGAGTCGGAGGCGATTTTGGTTGGAACCTACC
ACCAACTCCCACCTTCTTTTTCGAATGGGCTCGCAATAGAACTTTCTTTGCCAATGATAAACTCGTAATCAAATCAAGAGCCAATGAGGCTCATGACGTTGCGCAGCCAA
AATCTCAAGCAGACTTTGATGGATGCATCCCACCAGGATTTGTTTCCGACTTTTTCGGTTTCATCGTCCTTAATCGTCCTGGTCGTCGTTACTTTATCTCGACTATGGGG
AATGACTGCAATGCAGGAATGAAATTTGCTATTGACGTTATACCAAAACTACAAACATGA
mRNA sequenceShow/hide mRNA sequence
AATTCATTCAAATTTGGCAACTCATCTTCTTTCACATTTCTCCATTCCTTTCCAAGCTTCACTTTCTTTTATTCTTTCTTCTACATCCAAAATCAAATCATCAAAATGAG
TACAACAACAAGTTTCCATGCTTCCCTCTTCATCCTCGGAGCTCTCCTACACGTTGTCGTCGCCGTCGACCACCGAGTCGGAGGCGATTTTGGTTGGAACCTACCACCAA
CTCCCACCTTCTTTTTCGAATGGGCTCGCAATAGAACTTTCTTTGCCAATGATAAACTCGTAATCAAATCAAGAGCCAATGAGGCTCATGACGTTGCGCAGCCAAAATCT
CAAGCAGACTTTGATGGATGCATCCCACCAGGATTTGTTTCCGACTTTTTCGGTTTCATCGTCCTTAATCGTCCTGGTCGTCGTTACTTTATCTCGACTATGGGGAATGA
CTGCAATGCAGGAATGAAATTTGCTATTGACGTTATACCAAAACTACAAACATGAATGCCAAATGTTACAATCAAAGTTTGTTAAGTTATTCTTCTTCATCTGAGATATA
ATGCAACTGAGTAAATTTAAGCGGTCATATGTTCAGAAATTCTACTATTTCTTTTCAAGCTGTCTAATAATTGTTATTTTAATGTGACTCAACCTGTTCATTTGTAAATC
TGTGATTATTGAA
Protein sequenceShow/hide protein sequence
MSTTTSFHASLFILGALLHVVVAVDHRVGGDFGWNLPPTPTFFFEWARNRTFFANDKLVIKSRANEAHDVAQPKSQADFDGCIPPGFVSDFFGFIVLNRPGRRYFISTMG
NDCNAGMKFAIDVIPKLQT