CuGenDBv2

Gene ID	Lcy12g005390
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	FRIGIDA-like protein
Genome location	Chr12:21306400..21306615
RNA-Seq Expression	Lcy12g005390
Synteny	Lcy12g005390
Gene Ontology terms	GO:0009908 - flower development (biological process) GO:0030154 - cell differentiation (biological process)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040796.1 FRIGIDA-like protein 4a [Cucumis melo var. makuwa]

9.3e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_011659019.1 FRIGIDA-like protein 4a [Cucumis sativus]

9.3e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_016900353.1 PREDICTED: FRIGIDA-like protein 4a [Cucumis melo]

9.3e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_022138585.1 FRIGIDA-like protein 4a [Momordica charantia]

9.3e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_038874267.1 FRIGIDA-like protein 4a [Benincasa hispida]

9.3e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5L7 FRIGIDA-like protein

4.5e-19

96.36

Show/hide

Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

A0A1S4DWL0 FRIGIDA-like protein

4.5e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

A0A5A7TFJ5 FRIGIDA-like protein

4.5e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

A0A6J1C9V1 FRIGIDA-like protein

4.5e-19

96.36

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

A0A6J1KIJ5 FRIGIDA-like protein

3.8e-18

92.73

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLM S TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

SwissProt top hits

e value

%identity

Alignment

Q940H8 FRIGIDA-like protein 4b

1.8e-12

67.27

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        Q SLMTS  LLWKELS+HFT++EQ+L+KKSEALR  IETLD+QT+ S++ L+ RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

Q9LUV4 FRIGIDA-like protein 4a

2.5e-14

72.73

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLW+ELSDHFT+LEQ+L+KKSEAL+  IETLD+QT+ SL+ L++RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

Arabidopsis top hits

e value

%identity

Alignment

AT3G22440.1 FRIGIDA-like protein

1.8e-15

72.73

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLW+ELSDHFT+LEQ+L+KKSEAL+  IETLD+QT+ SL+ L++RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

AT4G14900.1 FRIGIDA-like protein

1.3e-13

67.27

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Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        Q SLMTS  LLWKELS+HFT++EQ+L+KKSEALR  IETLD+QT+ S++ L+ RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

Sequences

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CDS sequence

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ATGTTTCAGACGTCTCTAATGACTAGCTATACGCTGCTCTGGAAGGAGCTCTCGGACCACTTCACTAATCTTGAGCAAGATCTTTTGAAGAAATCGGAGGCATTG
AGGCATAAAATCGAAACCCTAGACCATCAGACTAAGGAGTCTCTTGATGAGCTGGAGAAGCGTGAGGAGCTTGAGATAAGGGCAAATTTCTTTCATCCATGGATT
CCTTAA

mRNA sequence

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Protein sequence

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MFQTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKREELEIRANFFHPWIP

Lcy12g005390 (gene) of Sponge gourd (P93075) v1 genome