; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy12g007750 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy12g007750
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr12:32628450..32630116
RNA-Seq ExpressionLcy12g007750
SyntenyLcy12g007750
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.9e-4635.51Show/hide
Query:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLP
        + + K K  GGL FRDL SFNQA++AKQ WR +  P+  +++V++ RY+ NS+                 +W   ++KK +R  +G+G+ + +++D W+P
Subjt:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLP

Query:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSI-SSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN
        RPATF+ ISP     E  VVA+ I    +W V +L Q+ ++ED+E I ++ + S    D+ +WH+D +GEY+VKSGY+L++              +  W 
Subjt:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSI-SSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN

Query:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREANPKGGAHVQPEED
          W + +P KVK+F+WR+  N  PT  NLW        IC  C+ ++ET  H L +C  AR+        VQP +D
Subjt:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREANPKGGAHVQPEED

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-5830.99Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        +C PKE GGLNFRDL  FNQA++AK  WR L +P+L +SKVL+ +YF ++S               GF+W  +LL K +R  +GNG +I  F DPWLPRP
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISS-SASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL
         TFK +     +++   VA FI+    WDV  ++     ED ++I  + ISS +  D W+WHYD RG Y+V+SGYKL M     A+        + WN +
Subjt:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISS-SASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL

Query:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR------------------------------EANPKG-----
        WK+ VP+K+K+F+WRS H   PT  NL    +     C +C +  E+  HA F C RAR                              +  PK      
Subjt:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR------------------------------EANPKG-----

Query:  ---------------GAHVQPEEDVLSLI--------------------------------SKGEKLILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQT
                       G  V P E     +                                S    L L+T+AA  GA   +  G ++RD    L    +
Subjt:  ---------------GAHVQPEEDVLSLI--------------------------------SKGEKLILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQT

Query:  LVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNSVEKVSFNFVGHKFNGFAHKMARACLF--SSPF
        +      SPL AE   +LE L+ A   +   L + SDSL  I+ I+ EI       + + +I+ +      +SF+    + N  AH +A+  +   S+ +
Subjt:  LVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNSVEKVSFNFVGHKFNGFAHKMARACLF--SSPF

Query:  LWLGNYPEWMESL
         WL N+P W+  L
Subjt:  LWLGNYPEWMESL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.0e-4638.55Show/hide
Query:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLP
        E L + K  GGL FR+   FNQA++AKQAWR L  P+  +S+VL+ RYF NSS                 +W   ++KK +R  +GNG+ I IF D WLP
Subjt:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLP

Query:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSI-SSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN
        RP TF+ I  P+    ++VVA+ I    QWD +KL Q+ +  D   I ++ + +  A D+ +WHYD RG Y+VKSGY+L++ +    S         +W+
Subjt:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSI-SSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN

Query:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE
         LW + +P K+K+F+WR+ +N  P+  NLW   +     C  C+  +ET  HAL +C  AR+
Subjt:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]9.1e-4839.23Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFP-----NSSAG---------FVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        LCK K  GG+ FR+ V FNQA+LAKQAWR L +P   I++VL+ RYF       ++AG          VW   LL K +R  +G+G  +N    PW+P P
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFP-----NSSAG---------FVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL
        + FK +    P   +  VA+FI+ + QWDV KL Q+    DV+ I  + +S     D  +WHY   G YTVKSGYKL+  +  ++         +WW   
Subjt:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL

Query:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE
        W +++PSK+++F WR++H + PT   L Y H+  +  CP+CQ  +ET +HA F C RA++
Subjt:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE

XP_042965938.1 uncharacterized protein LOC122299618 [Carya illinoinensis]1.0e-4630.22Show/hide
Query:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWLP
        E L +PK  GGL FRDL SFN A+LAKQAWR L NP   ++ + + +Y+ + S           ++W      +NLLK+ +R  +GN +SI I++  WL 
Subjt:  EDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWLP

Query:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRE--TSW
         P+T  V +P     E A V+E +S   +WDV  L     +E+VE I  + IS S+A DK IW     G +T++S Y+L M   + A     +R    + 
Subjt:  RPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRE--TSW

Query:  WNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREANPKGGAHVQ----PEEDVLS-------LISKGEKL
        W  +W + +  KVKLF+WR+  +   T  NL    +  N  CP+C+ E ETT HAL+ C  A +   +     Q     E D+ S          + + +
Subjt:  WNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREANPKGGAHVQ----PEEDVLS-------LISKGEKL

Query:  ILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQTLVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQN
          + +AA      + GIG+V+RD+ G +           T    AE+  + + L + R ++ + +    D+  ++ ++  E +  S   S + D+K +  
Subjt:  ILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQTLVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQN

Query:  SVEKVSFNFVGHKFNGFAHKMARACL-FSSPFLWLGNYPEWMESLSLQER
          +K   +FV  + N  AH +AR  L F S  +W+ + P+ +  +  +E+
Subjt:  SVEKVSFNFVGHKFNGFAHKMARACL-FSSPFLWLGNYPEWMESLSLQER

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248745.5e-5930.99Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        +C PKE GGLNFRDL  FNQA++AK  WR L +P+L +SKVL+ +YF ++S               GF+W  +LL K +R  +GNG +I  F DPWLPRP
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISS-SASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL
         TFK +     +++   VA FI+    WDV  ++     ED ++I  + ISS +  D W+WHYD RG Y+V+SGYKL M     A+        + WN +
Subjt:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISS-SASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL

Query:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR------------------------------EANPKG-----
        WK+ VP+K+K+F+WRS H   PT  NL    +     C +C +  E+  HA F C RAR                              +  PK      
Subjt:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR------------------------------EANPKG-----

Query:  ---------------GAHVQPEEDVLSLI--------------------------------SKGEKLILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQT
                       G  V P E     +                                S    L L+T+AA  GA   +  G ++RD    L    +
Subjt:  ---------------GAHVQPEEDVLSLI--------------------------------SKGEKLILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQT

Query:  LVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNSVEKVSFNFVGHKFNGFAHKMARACLF--SSPF
        +      SPL AE   +LE L+ A   +   L + SDSL  I+ I+ EI       + + +I+ +      +SF+    + N  AH +A+  +   S+ +
Subjt:  LVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNSVEKVSFNFVGHKFNGFAHKMARACLF--SSPF

Query:  LWLGNYPEWMESL
         WL N+P W+  L
Subjt:  LWLGNYPEWMESL

A0A803PAK3 Uncharacterized protein9.8e-4830.14Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        L + K  GG+ F+  V FNQA+LAKQAW  LSNP+  +S++L+ RYF +SS               G VW   LL K +R  +GNG+ I     PWLP  
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAV--VAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN
         +FK   P      NA   V++ I    +W+   LN   +  DV +IQ + ++     D  IWH++  G Y+VKSGY L+    ++  +    +   WW 
Subjt:  ATFKVISPPIPSVENAV--VAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWN

Query:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTR------------AREANPKGGAHVQPEEDVLSLISKGEKLI
        K W +++PSK+++F+WR+ H+  P    L   H+  +  C +C    ET  HALF C R            A  + P  G +    +D   L      L 
Subjt:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTR------------AREANPKGGAHVQPEEDVLSLISKGEKLI

Query:  LHTNAAFMGAMRESGIGLVMRDKFGHLKPVQTLVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNS
        L+T+AA      +SG G V+RD  G +    +     C +P   EA  ++  L+  + + +    I ++SL+++K +    +  S     L +I ++ ++
Subjt:  LHTNAAFMGAMRESGIGLVMRDKFGHLKPVQTLVSTVCTSPLGAEATTVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNS

Query:  VEKVSFNFVGHKFNGFAHKMARACL-FSSPFLWLGNYP
                V    N  AH +AR  L   S   W+G  P
Subjt:  VEKVSFNFVGHKFNGFAHKMARACL-FSSPFLWLGNYP

A0A803PEK8 Uncharacterized protein4.1e-4638.91Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVWVMNLLKKEI-----RKNLGNGQSINIFRDPWLPRP
        LCKPKE GGL FRDL  FNQA+LAKQ WR +  P    S+VL+  YFP  S         A FVW   +  K++     R  +GNG+++ +  DPWL RP
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVWVMNLLKKEI-----RKNLGNGQSINIFRDPWLPRP

Query:  ATFKVI-SPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISSSA---SDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWW
         TFK+   PP+P  EN  VA+      +WD   +      ED E+I  LS  S+     DK +WHY   GEYTVKSGYK++     E      +    WW
Subjt:  ATFKVI-SPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISSSA---SDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWW

Query:  NKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQ-EEMETTDHALFQCTRAREANPKGGAHVQPE----EDVLSLISKGEKL
          LW +++P K+K FVW+  +N  PT+ NL    +  + IC  C    +ETT HAL++C R++E     G     +    ED+LS + +  +L
Subjt:  NKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQ-EEMETTDHALFQCTRAREANPKGGAHVQPE----EDVLSLISKGEKL

A0A803PVI9 Uncharacterized protein4.4e-4839.85Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        LC+PK  GG+ F+  + FNQAMLAKQAWR  SNP   +S++L+ RYF  SS               G VW   LL K +R  +G+GQ+I    DPW+P  
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS--------------AGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKL-SMMNGQEASLLGVRRETSWWNK
          FK +   + S  N  V+ FI+   +W++  L    +  DVE + ++ +S   ASD+ IW+++  G YTVKSGY L + +  Q  +  G++ +T WWNK
Subjt:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKL-SMMNGQEASLLGVRRETSWWNK

Query:  LWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE
         W + +PSKV++F+WR+ ++  PT   L + H+  + IC +CQ   ETT HALF C R R+
Subjt:  LWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE

A0A803Q6Z2 Uncharacterized protein4.4e-4839.23Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFP-----NSSAG---------FVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP
        LCK K  GG+ FR+ V FNQA+LAKQAWR L +P   I++VL+ RYF       ++AG          VW   LL K +R  +G+G  +N    PW+P P
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFP-----NSSAG---------FVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRP

Query:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL
        + FK +    P   +  VA+FI+ + QWDV KL Q+    DV+ I  + +S     D  +WHY   G YTVKSGYKL+  +  ++         +WW   
Subjt:  ATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSIS-SSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKL

Query:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE
        W +++PSK+++F WR++H + PT   L Y H+  +  CP+CQ  +ET +HA F C RA++
Subjt:  WKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRARE

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657508.3e-2025.77Show/hide
Query:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRY-----------FPNSSAGFVW------VMNLLKKEIRKNLGNGQSINIFRDPWL
        +C PK+ GGL  R   S N+A+++K  WR L   +   + VL+ +Y            P  S    W      + +++   +    G+GQ I  + D W+
Subjt:  LCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRY-----------FPNSSAGFVW------VMNLLKKEIRKNLGNGQSINIFRDPWL

Query:  PRPATFKVISPPIPSVENAVVAEFI-SPALQWDVVKLNQYLIREDVEMIQR--LSISSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETS
              ++ +   P+  + VVA+ +  P   WD  K++ Y        ++   L + + A D+  W +   G+++V+S Y+  M+   E     +    S
Subjt:  PRPATFKVISPPIPSVENAVVAEFI-SPALQWDVVKLNQYLIREDVEMIQR--LSISSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETS

Query:  WWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQC
        ++N LWK+RVP +VK F+W   + +  T       HL  + +C VC+  +E+  H L  C
Subjt:  WWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQC

P93295 Uncharacterized mitochondrial protein AtMg003106.4e-1239Show/hide
Query:  EDLCKPKE-VGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL
        + LCK KE  GGL FRDL  FNQA+LAKQ++R +  PH  +S++LR RYFP+SS           + W        LL + + + +G+G    ++ D W+
Subjt:  EDLCKPKE-VGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein3.4e-1630.26Show/hide
Query:  LLKKEIRKNLGNGQSINI----FRDPWLPRPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISSSAS-DKWIWHYDGRGEY
        LLKK  R  +G+GQ+I I      D   PRP   +     + ++ N  + E       WD  K++Q++ + D   I R+ ++ S   DK IW+Y+  GEY
Subjt:  LLKKEIRKNLGNGQSINI----FRDPWLPRPATFKVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISSSAS-DKWIWHYDGRGEY

Query:  TVKSGYKLSMMNGQEASLLGV---RRETSWWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREA
        TV+SGY L + +    ++  +           ++W + +  K+K F+WR+   +  TT  L    +  +  CP C  E E+ +HALF C  A  A
Subjt:  TVKSGYKLSMMNGQEASLLGV---RRETSWWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREA

AT3G25270.1 Ribonuclease H-like superfamily protein3.5e-0528.09Show/hide
Query:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREA-NPKGGAHVQPEEDVLSLISKGEKLI
        K+WK++   K+K F+W+    +  T  NL   H+  +  C  C +E ET+ H  F C  A++     G  H +     +++ +K E L+
Subjt:  KLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREA-NPKGGAHVQPEEDVLSLISKGEKLI

AT4G29090.1 Ribonuclease H-like superfamily protein7.7e-2932.34Show/hide
Query:  KEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL-PRPATF
        K  GG+ F+D+ +FN A+L KQ WR LS P   ++KV + RYF  S            FVW        +L++  R  +GNG+ I I+R  WL  +PA+ 
Subjt:  KEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL-PRPATF

Query:  KVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDV-EM----IQRLSISS------SASDKWIWHYDGRGEYTVKSGY-KLSMMNGQEASLLGVRR
         +    +P  E A V+  +  +   D++  +    R+DV EM    ++R  I           D + W Y   G+YTVKSGY  L+ +  + +S   V  
Subjt:  KVISPPIPSVENAVVAEFISPALQWDVVKLNQYLIREDV-EM----IQRLSISS------SASDKWIWHYDGRGEYTVKSGY-KLSMMNGQEASLLGVRR

Query:  ET--SWWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR
         +    + K+WK +   K++ F+W+   NS P    L Y HL     C  C    ET +H LF+CT AR
Subjt:  ET--SWWNKLWKMRVPSKVKLFVWRSFHNSTPTTVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.5e-1339Show/hide
Query:  EDLCKPKE-VGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL
        + LCK KE  GGL FRDL  FNQA+LAKQ++R +  PH  +S++LR RYFP+SS           + W        LL + + + +G+G    ++ D W+
Subjt:  EDLCKPKE-VGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSS---------AGFVW-----VMNLLKKEIRKNLGNGQSINIFRDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGGTTGTTTCAGGATCCCCAAAGGAAGATCTCTGCAAACCAAAGGAGGTTGGTGGTTTAAATTTTCGAGATCTAGTTAGCTTCAATCAGGCAATGCTTGCAAA
GCAGGCTTGGAGGGCGTTGAGTAACCCGCATCTTACAATCTCCAAAGTTTTGCGCGGGAGGTATTTCCCGAATTCATCAGCTGGATTTGTATGGGTAATGAATCTTTTGA
AGAAAGAAATAAGGAAAAATCTAGGTAATGGTCAGTCGATAAATATTTTCCGGGATCCATGGCTTCCTCGACCCGCCACCTTTAAGGTGATTTCACCTCCCATTCCTTCT
GTGGAGAATGCGGTAGTGGCGGAGTTTATTTCACCAGCTTTGCAATGGGATGTTGTGAAACTTAACCAATACCTGATTCGGGAAGATGTAGAGATGATCCAGCGCCTTTC
GATAAGTAGTTCTGCCTCGGATAAATGGATATGGCACTATGATGGTAGAGGAGAGTATACTGTGAAGAGTGGATATAAGCTCAGTATGATGAATGGTCAAGAGGCGTCTT
TGTTAGGAGTAAGGCGAGAGACGAGTTGGTGGAATAAGCTTTGGAAGATGAGGGTGCCTAGCAAGGTGAAACTTTTTGTTTGGAGATCCTTCCATAATTCAACTCCAACC
ACGGTCAATCTATGGTATCATCATTTACCTTTCAATGGGATCTGCCCAGTTTGTCAAGAGGAGATGGAGACTACAGATCATGCCCTCTTTCAGTGTACGAGAGCTCGGGA
GGCCAACCCGAAGGGTGGGGCACATGTTCAACCTGAGGAAGATGTTCTCAGCCTTATTTCAAAAGGTGAAAAGCTTATTTTGCATACCAATGCAGCTTTTATGGGAGCTA
TGCGCGAAAGTGGTATTGGGCTAGTTATGCGGGATAAATTTGGTCATCTCAAGCCAGTTCAGACGTTAGTTTCTACGGTTTGTACCTCTCCATTAGGGGCGGAAGCGACA
ACTGTGCTAGAAAGGCTTCGCCTTGCAAGAACAATGGATGTGCATCGTTTAACGATTCTGTCTGATTCTCTAACTTTAATTAAATCTATTAAAGGGGAGATCCAATGTGA
ATCTTGCATTGCCTCGACACTTTGGGATATCAAAGTCATCCAAAATTCAGTCGAAAAGGTGAGCTTTAATTTCGTTGGTCATAAATTTAATGGCTTTGCCCATAAGATGG
CTCGAGCATGTCTTTTTTCGTCGCCCTTTTTGTGGCTAGGAAACTATCCGGAGTGGATGGAAAGTTTATCGCTCCAAGAACGAGGTATGTTTGTATCCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGGTTGTTTCAGGATCCCCAAAGGAAGATCTCTGCAAACCAAAGGAGGTTGGTGGTTTAAATTTTCGAGATCTAGTTAGCTTCAATCAGGCAATGCTTGCAAA
GCAGGCTTGGAGGGCGTTGAGTAACCCGCATCTTACAATCTCCAAAGTTTTGCGCGGGAGGTATTTCCCGAATTCATCAGCTGGATTTGTATGGGTAATGAATCTTTTGA
AGAAAGAAATAAGGAAAAATCTAGGTAATGGTCAGTCGATAAATATTTTCCGGGATCCATGGCTTCCTCGACCCGCCACCTTTAAGGTGATTTCACCTCCCATTCCTTCT
GTGGAGAATGCGGTAGTGGCGGAGTTTATTTCACCAGCTTTGCAATGGGATGTTGTGAAACTTAACCAATACCTGATTCGGGAAGATGTAGAGATGATCCAGCGCCTTTC
GATAAGTAGTTCTGCCTCGGATAAATGGATATGGCACTATGATGGTAGAGGAGAGTATACTGTGAAGAGTGGATATAAGCTCAGTATGATGAATGGTCAAGAGGCGTCTT
TGTTAGGAGTAAGGCGAGAGACGAGTTGGTGGAATAAGCTTTGGAAGATGAGGGTGCCTAGCAAGGTGAAACTTTTTGTTTGGAGATCCTTCCATAATTCAACTCCAACC
ACGGTCAATCTATGGTATCATCATTTACCTTTCAATGGGATCTGCCCAGTTTGTCAAGAGGAGATGGAGACTACAGATCATGCCCTCTTTCAGTGTACGAGAGCTCGGGA
GGCCAACCCGAAGGGTGGGGCACATGTTCAACCTGAGGAAGATGTTCTCAGCCTTATTTCAAAAGGTGAAAAGCTTATTTTGCATACCAATGCAGCTTTTATGGGAGCTA
TGCGCGAAAGTGGTATTGGGCTAGTTATGCGGGATAAATTTGGTCATCTCAAGCCAGTTCAGACGTTAGTTTCTACGGTTTGTACCTCTCCATTAGGGGCGGAAGCGACA
ACTGTGCTAGAAAGGCTTCGCCTTGCAAGAACAATGGATGTGCATCGTTTAACGATTCTGTCTGATTCTCTAACTTTAATTAAATCTATTAAAGGGGAGATCCAATGTGA
ATCTTGCATTGCCTCGACACTTTGGGATATCAAAGTCATCCAAAATTCAGTCGAAAAGGTGAGCTTTAATTTCGTTGGTCATAAATTTAATGGCTTTGCCCATAAGATGG
CTCGAGCATGTCTTTTTTCGTCGCCCTTTTTGTGGCTAGGAAACTATCCGGAGTGGATGGAAAGTTTATCGCTCCAAGAACGAGGTATGTTTGTATCCCCTTAG
Protein sequenceShow/hide protein sequence
MRWVVSGSPKEDLCKPKEVGGLNFRDLVSFNQAMLAKQAWRALSNPHLTISKVLRGRYFPNSSAGFVWVMNLLKKEIRKNLGNGQSINIFRDPWLPRPATFKVISPPIPS
VENAVVAEFISPALQWDVVKLNQYLIREDVEMIQRLSISSSASDKWIWHYDGRGEYTVKSGYKLSMMNGQEASLLGVRRETSWWNKLWKMRVPSKVKLFVWRSFHNSTPT
TVNLWYHHLPFNGICPVCQEEMETTDHALFQCTRAREANPKGGAHVQPEEDVLSLISKGEKLILHTNAAFMGAMRESGIGLVMRDKFGHLKPVQTLVSTVCTSPLGAEAT
TVLERLRLARTMDVHRLTILSDSLTLIKSIKGEIQCESCIASTLWDIKVIQNSVEKVSFNFVGHKFNGFAHKMARACLFSSPFLWLGNYPEWMESLSLQERGMFVSP