; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy12g007780 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy12g007780
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr12:32743031..32745310
RNA-Seq ExpressionLcy12g007780
SyntenyLcy12g007780
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21788.1 hypothetical protein TSUD_329120, partial [Trifolium subterraneum]2.2e-3532.92Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K +M  AW++RN   I  +  N+FLF F  + + D + +NGPW FDR+L++L      ++  +L    V F +RV++LP+  R++ IA+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLKF----
         E D K++  +MG  +R+RV +D+ +PL RG  +N +   KE WV  +YER+P FC +CG+IGH  + C + ++ ++    + E     +G WL+     
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLKF----

Query:  -QGFTGKTKESDSSLDMLHVMEEESRIGSNTDNIVVENSQVEE
           +  K + S S+          +  G N+      N +VE+
Subjt:  -QGFTGKTKESDSSLDMLHVMEEESRIGSNTDNIVVENSQVEE

GAU41525.1 hypothetical protein TSUD_140560 [Trifolium subterraneum]5.9e-3638.46Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K ++  AW+ +N   +  +  N+FLF F  K+D D +LRNGPW FDR+L++L      ++  DL+   V+F +RV++LP   R++ +A+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDF-----EYGMWLK
         E D  K+  + G  +R++  LD+ +PL RG  I  +  DK  WV  +YER+P FC +CGKIGH  K C + ++ ++ N  D       YG WL+
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDF-----EYGMWLK

MCH80348.1 hypothetical protein [Trifolium medium]7.7e-3637.44Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K +M  AW++RN   I  +  N++LF F  K + D + RNGPW FDR+L++L      ++  +L   +V F +RV++LP+  R++ IA+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLK
         E D K+   +MG  +R+RV +D+ +PL RG  +N +   KE WV  +YER+P FC +CG+IGH  + C + ++ ++    + E     +G WL+
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLK

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.9e-3739.9Show/hide
Query:  LKNSMMGAWKTR-NDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        LKN++  AWK     F++DIIG NIFLF F    DR+ ILR GPW FDR+LI+++ P    + +D++F+ V   +  F+L +   N  +A ++GN IG F
Subjt:  LKNSMMGAWKTR-NDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFEYGMWLKFQG
         + ++  N    G+ +R+RVR D+ +PL RG  +N +     CW+ I+YER+P+F   CG++ H+ K CS+     D   ++ +YG WL+FQG
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFEYGMWLKFQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.1e-3739.9Show/hide
Query:  LKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFF
        L   ++ AWK  +   ++ IG N+FLF F  + D + +++ GPWFFD++LIVL+ P   +   +L F  V F I +F+LP+ + N  +A ++GN IG F 
Subjt:  LKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFF

Query:  EHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNR-KNKEDPNLEDFEYGMWLKFQG
        + D  +     G ++RIRV +DIT+PL RG  IN +     CW+ I+YER+P+FC  CG IGH    C  R    +D +    EYG WL+F G
Subjt:  EHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNR-KNKEDPNLEDFEYGMWLKFQG

TrEMBL top hitse value%identityAlignment
A0A2Z6LV25 Uncharacterized protein (Fragment)1.1e-3532.92Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K +M  AW++RN   I  +  N+FLF F  + + D + +NGPW FDR+L++L      ++  +L    V F +RV++LP+  R++ IA+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLKF----
         E D K++  +MG  +R+RV +D+ +PL RG  +N +   KE WV  +YER+P FC +CG+IGH  + C + ++ ++    + E     +G WL+     
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLKF----

Query:  -QGFTGKTKESDSSLDMLHVMEEESRIGSNTDNIVVENSQVEE
           +  K + S S+          +  G N+      N +VE+
Subjt:  -QGFTGKTKESDSSLDMLHVMEEESRIGSNTDNIVVENSQVEE

A0A2Z6NZV1 Uncharacterized protein2.8e-3638.46Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K ++  AW+ +N   +  +  N+FLF F  K+D D +LRNGPW FDR+L++L      ++  DL+   V+F +RV++LP   R++ +A+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDF-----EYGMWLK
         E D  K+  + G  +R++  LD+ +PL RG  I  +  DK  WV  +YER+P FC +CGKIGH  K C + ++ ++ N  D       YG WL+
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDF-----EYGMWLK

A0A392M033 CCHC-type domain-containing protein (Fragment)3.7e-3637.44Show/hide
Query:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        A K +M  AW++RN   I  +  N++LF F  K + D + RNGPW FDR+L++L      ++  +L   +V F +RV++LP+  R++ IA+K+GN +G F
Subjt:  ALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLK
         E D K+   +MG  +R+RV +D+ +PL RG  +N +   KE WV  +YER+P FC +CG+IGH  + C + ++ ++    + E     +G WL+
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFE-----YGMWLK

A0A6J1BSZ1 uncharacterized protein LOC1110054813.4e-3739.9Show/hide
Query:  LKNSMMGAWKTR-NDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF
        LKN++  AWK     F++DIIG NIFLF F    DR+ ILR GPW FDR+LI+++ P    + +D++F+ V   +  F+L +   N  +A ++GN IG F
Subjt:  LKNSMMGAWKTR-NDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEF

Query:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFEYGMWLKFQG
         + ++  N    G+ +R+RVR D+ +PL RG  +N +     CW+ I+YER+P+F   CG++ H+ K CS+     D   ++ +YG WL+FQG
Subjt:  FEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFEYGMWLKFQG

A0A6J1DU55 uncharacterized protein LOC1110231354.4e-3739.9Show/hide
Query:  LKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFF
        L   ++ AWK  +   ++ IG N+FLF F  + D + +++ GPWFFD++LIVL+ P   +   +L F  V F I +F+LP+ + N  +A ++GN IG F 
Subjt:  LKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFF

Query:  EHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNR-KNKEDPNLEDFEYGMWLKFQG
        + D  +     G ++RIRV +DIT+PL RG  IN +     CW+ I+YER+P+FC  CG IGH    C  R    +D +    EYG WL+F G
Subjt:  EHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNR-KNKEDPNLEDFEYGMWLKFQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein9.7e-1326.11Show/hide
Query:  SMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFFEHD
        SM   W      +  I+    F FIF  +E  + +LR GPW F+  +I+L+  E +       F ++ F +++  +P  + N  +   IG  +G+  + D
Subjt:  SMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFFEHD

Query:  TKKNYAQMGNNIRIRVRLDITRPL--CRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLED
                 +  R+ +  DIT PL   R F            +  RYER+  FC  CG + H F  C  +   E+   +D
Subjt:  TKKNYAQMGNNIRIRVRLDITRPL--CRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLED

AT3G42140.1 zinc ion binding;nucleic acid binding5.9e-1022.87Show/hide
Query:  ALKNSMMGAWKTRNDFNID--IIGSNIFL----FIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIG
        AL+   + + + R   N+D  ++G  + +    F+F+++E    ILR GPW F+  + V++   K     D  FK + F I++  +P+ +   RI   IG
Subjt:  ALKNSMMGAWKTRNDFNID--IIGSNIFL----FIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIG

Query:  NDIGEFFEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLED
          +G F E         +G ++ +                          +  +YE++  FC +CG + H    C    N + P+ +D
Subjt:  NDIGEFFEHDTKKNYAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCTCTGAAAAACTCCATGATGGGTGCCTGGAAGACAAGAAACGACTTTAACATAGACATTATAGGAAGCAATATCTTCCTGTTCATTTTCGAAAATAAAGAAGA
CAGAGACTGGATATTAAGAAATGGACCTTGGTTCTTTGACAGAAGCTTGATTGTTCTTGAAGCTCCTGAGAAAAGGCAAAGAACCATGGACTTAAACTTCAAGTATGTTG
ATTTTTTGATAAGAGTCTTCAACTTGCCAATATGCTACAGAAATGACCGAATAGCTAGAAAGATTGGAAACGACATTGGAGAATTCTTTGAACATGACACAAAGAAGAAC
TACGCTCAGATGGGCAATAACATTAGAATTCGAGTCCGGTTGGATATCACCAGACCTTTATGCAGAGGCTTCATGATCAATACGGAAGACACCGATAAAGAATGTTGGGT
TTCAATTCGATATGAACGCATTCCTGAATTCTGCTTAAGCTGTGGCAAGATCGGCCATGTATTTAAAGGTTGCTCAAACCGAAAGAACAAAGAAGATCCAAATTTAGAAG
ATTTCGAATATGGCATGTGGCTGAAATTTCAAGGTTTCACTGGAAAAACAAAAGAATCAGACAGCAGTCTTGACATGCTTCATGTAATGGAAGAGGAATCACGTATTGGG
AGCAACACTGACAACATAGTGGTGGAGAATAGCCAAGTAGAGGAGGACGCACCATTAAAGAAAAAGAGAAGTTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCTCTGAAAAACTCCATGATGGGTGCCTGGAAGACAAGAAACGACTTTAACATAGACATTATAGGAAGCAATATCTTCCTGTTCATTTTCGAAAATAAAGAAGA
CAGAGACTGGATATTAAGAAATGGACCTTGGTTCTTTGACAGAAGCTTGATTGTTCTTGAAGCTCCTGAGAAAAGGCAAAGAACCATGGACTTAAACTTCAAGTATGTTG
ATTTTTTGATAAGAGTCTTCAACTTGCCAATATGCTACAGAAATGACCGAATAGCTAGAAAGATTGGAAACGACATTGGAGAATTCTTTGAACATGACACAAAGAAGAAC
TACGCTCAGATGGGCAATAACATTAGAATTCGAGTCCGGTTGGATATCACCAGACCTTTATGCAGAGGCTTCATGATCAATACGGAAGACACCGATAAAGAATGTTGGGT
TTCAATTCGATATGAACGCATTCCTGAATTCTGCTTAAGCTGTGGCAAGATCGGCCATGTATTTAAAGGTTGCTCAAACCGAAAGAACAAAGAAGATCCAAATTTAGAAG
ATTTCGAATATGGCATGTGGCTGAAATTTCAAGGTTTCACTGGAAAAACAAAAGAATCAGACAGCAGTCTTGACATGCTTCATGTAATGGAAGAGGAATCACGTATTGGG
AGCAACACTGACAACATAGTGGTGGAGAATAGCCAAGTAGAGGAGGACGCACCATTAAAGAAAAAGAGAAGTTGGAAATGA
Protein sequenceShow/hide protein sequence
MPALKNSMMGAWKTRNDFNIDIIGSNIFLFIFENKEDRDWILRNGPWFFDRSLIVLEAPEKRQRTMDLNFKYVDFLIRVFNLPICYRNDRIARKIGNDIGEFFEHDTKKN
YAQMGNNIRIRVRLDITRPLCRGFMINTEDTDKECWVSIRYERIPEFCLSCGKIGHVFKGCSNRKNKEDPNLEDFEYGMWLKFQGFTGKTKESDSSLDMLHVMEEESRIG
SNTDNIVVENSQVEEDAPLKKKRSWK