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Lcy13g006100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy13g006100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationChr13:5333627..5334164
RNA-Seq ExpressionLcy13g006100
SyntenyLcy13g006100
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446800.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]2.4e-4678.2Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE
        MST+LDLRRTLL+IVRRP IKLQIP PS+   M  D     IQK+RID   D  AEELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVE
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE

Query:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK
        IV+R+EIEPYL ASF+HEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]2.3e-4984.62Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN
        MSTDLDLRRTLL++VRRPAIKLQIPRP SSMAAD     IQKERID  D  AEELCCRTPTSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN

Query:  REEIEPYLTASFEHEDRVRKSAKRSFCECK
        REEIEPY T+SF+HE+RV+KSAK SFCECK
Subjt:  REEIEPYLTASFEHEDRVRKSAKRSFCECK

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.1e-4883.85Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN
        MSTDLDLRRTLL++VRRPAIKLQIPRP SSMAAD     IQKERID  D   EELCCRTPTSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN

Query:  REEIEPYLTASFEHEDRVRKSAKRSFCECK
        REEIEPY T+SF+HE+RV+KSAK SFCECK
Subjt:  REEIEPYLTASFEHEDRVRKSAKRSFCECK

XP_023531359.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]1.5e-4883.85Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN
        MSTDLDLRRTLL++VRRPAIKLQIPRP SSMAAD     IQKER D  D  AEELCCRTPTSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN

Query:  REEIEPYLTASFEHEDRVRKSAKRSFCECK
        REEIEPY T+SF+HE+RV+KSAK SFCECK
Subjt:  REEIEPYLTASFEHEDRVRKSAKRSFCECK

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]3.7e-4782.81Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRPS-SMAAD-----IQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNRE
        MSTDLDLRRTLL+IVRRP IKLQIP PS SMA D     IQK+RI D   EELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIVNRE
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRPS-SMAAD-----IQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNRE

Query:  EIEPYLTASFEHEDRVRKSAKRSFCECK
        EIEPYL +SF+HEDRVRKSAKRSFCECK
Subjt:  EIEPYLTASFEHEDRVRKSAKRSFCECK

TrEMBL top hitse value%identityAlignment
A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like1.2e-4678.2Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE
        MST+LDLRRTLL+IVRRP IKLQIP PS+   M  D     IQK+RID   D  AEELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVE
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE

Query:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK
        IV+R+EIEPYL ASF+HEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like1.2e-4678.2Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE
        MST+LDLRRTLL+IVRRP IKLQIP PS+   M  D     IQK+RID   D  AEELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVE
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSS---MAAD-----IQKERID---DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVE

Query:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK
        IV+R+EIEPYL ASF+HEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLTASFEHEDRVRKSAKRSFCECK

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like1.1e-4984.62Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN
        MSTDLDLRRTLL++VRRPAIKLQIPRP SSMAAD     IQKERID  D  AEELCCRTPTSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN

Query:  REEIEPYLTASFEHEDRVRKSAKRSFCECK
        REEIEPY T+SF+HE+RV+KSAK SFCECK
Subjt:  REEIEPYLTASFEHEDRVRKSAKRSFCECK

A0A6J1HSZ5 cyclin-dependent protein kinase inhibitor SMR1-like1.8e-4473.88Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSSMAAD----IQKERIDDSAA--------EELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFV
        MST LDLRRT L+ VRRP + L IPRPSS A D    IQK+ ID +A         EELCCRTPTSAENKIP +LQCPPAPRKRKRPP+CRRRL+ELEFV
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRPSSMAAD----IQKERIDDSAA--------EELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFV

Query:  EIVNREEIEPYLTASFEHEDRVRKSAKRSFCECK
        +IVNRE+IEPYL +SFEHEDRVRKSAKRSFCECK
Subjt:  EIVNREEIEPYLTASFEHEDRVRKSAKRSFCECK

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like5.5e-4983.85Show/hide
Query:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN
        MSTDLDLRRTLL++VRRPAIKLQIPRP SSMAAD     IQKERID  D   EELCCRTPTSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+
Subjt:  MSTDLDLRRTLLDIVRRPAIKLQIPRP-SSMAAD-----IQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVN

Query:  REEIEPYLTASFEHEDRVRKSAKRSFCECK
        REEIEPY T+SF+HE+RV+KSAK SFCECK
Subjt:  REEIEPYLTASFEHEDRVRKSAKRSFCECK

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR65.6e-0637.5Show/hide
Query:  IKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI
        +K ++  P  +  +++++  ++   EE C  TPT+ E KIPE+L+CPPAPRKR+    CR  ++
Subjt:  IKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR18.6e-0731.03Show/hide
Query:  KLQIPRPSSMAADIQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVNREEIEPYLTASFE
        K   P P  + +   K + D  D   ++L C TPTS E+KIP V+  PP P ++ RPP             +C+R+L+      I+NREEI+ + ++ + 
Subjt:  KLQIPRPSSMAADIQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVNREEIEPYLTASFE

Query:  HEDRVRKSAKRSFCEC
        +E       +RS+  C
Subjt:  HEDRVRKSAKRSFCEC

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR34.0e-0439.42Show/hide
Query:  KLQIP-RPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEV--LQCPPAPRKRK--RPPTCRRRLIELEFVEIVNREEIEPYLTASFEHED---RVRK
        K+++P RP     D   E  D +  EE  C+TPTS+++KIPEV    CPPAPRK K  R    +R+L     V +VNR  I+         ED   R++K
Subjt:  KLQIP-RPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEV--LQCPPAPRKRK--RPPTCRRRLIELEFVEIVNREEIEPYLTASFEHED---RVRK

Query:  SAKR
        S K+
Subjt:  SAKR

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein3.1e-0434.26Show/hide
Query:  LLDIVRRPAIKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRL---IELEFVEI--VNREEIEPYLTASFE
        LL+ +       Q PR S    D Q     +   E LC  TPTS+++KIPEV  CPP PRKR R  +  ++     +L F E   V  +E+E        
Subjt:  LLDIVRRPAIKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRL---IELEFVEI--VNREEIEPYLTASFE

Query:  HEDRVRKS
        H  + R+S
Subjt:  HEDRVRKS

AT2G37610.1 unknown protein5.3e-0440.98Show/hide
Query:  IQKERIDDSAAEELC------CRTPTSAENKIPEVLQCPPAPRKRK------RPPTCRRRL
        ++++R+D+   EE+        +TPT  EN+IP V +CPPAP KR       R   CRRRL
Subjt:  IQKERIDDSAAEELC------CRTPTSAENKIPEVLQCPPAPRKRK------RPPTCRRRL

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS6.1e-0831.03Show/hide
Query:  KLQIPRPSSMAADIQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVNREEIEPYLTASFE
        K   P P  + +   K + D  D   ++L C TPTS E+KIP V+  PP P ++ RPP             +C+R+L+      I+NREEI+ + ++ + 
Subjt:  KLQIPRPSSMAADIQKERID--DSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVNREEIEPYLTASFE

Query:  HEDRVRKSAKRSFCEC
        +E       +RS+  C
Subjt:  HEDRVRKSAKRSFCEC

AT5G02420.1 unknown protein2.8e-0539.42Show/hide
Query:  KLQIP-RPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEV--LQCPPAPRKRK--RPPTCRRRLIELEFVEIVNREEIEPYLTASFEHED---RVRK
        K+++P RP     D   E  D +  EE  C+TPTS+++KIPEV    CPPAPRK K  R    +R+L     V +VNR  I+         ED   R++K
Subjt:  KLQIP-RPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEV--LQCPPAPRKRK--RPPTCRRRLIELEFVEIVNREEIEPYLTASFEHED---RVRK

Query:  SAKR
        S K+
Subjt:  SAKR

AT5G40460.1 unknown protein4.0e-0737.5Show/hide
Query:  IKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI
        +K ++  P  +  +++++  ++   EE C  TPT+ E KIPE+L+CPPAPRKR+    CR  ++
Subjt:  IKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACAGACCTCGATCTCCGACGGACGTTGCTCGATATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGGCCGTCGTCAATGGCGGCGGATATTCAGAAAGA
GAGAATCGACGACTCCGCCGCCGAAGAATTGTGTTGCCGAACGCCGACGTCGGCAGAGAACAAGATTCCGGAGGTGCTACAATGTCCGCCGGCGCCGCGGAAGCGGAAGA
GGCCTCCGACTTGTCGAAGGAGACTGATCGAGCTTGAATTCGTGGAGATCGTGAATAGAGAAGAGATCGAACCGTATTTAACCGCGAGTTTCGAGCACGAAGACAGAGTT
AGAAAATCCGCTAAACGAAGCTTCTGCGAGTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
CTCAACACCAAACAAACATTATTCTTCAATTTTCACCAAAATCTCTCTCTCTCTCTCTCTCTATACTTGTATTTATCTGTATCATCACGAAGCTCTCAGAAATGTCCACA
GACCTCGATCTCCGACGGACGTTGCTCGATATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGGCCGTCGTCAATGGCGGCGGATATTCAGAAAGAGAGAATCGA
CGACTCCGCCGCCGAAGAATTGTGTTGCCGAACGCCGACGTCGGCAGAGAACAAGATTCCGGAGGTGCTACAATGTCCGCCGGCGCCGCGGAAGCGGAAGAGGCCTCCGA
CTTGTCGAAGGAGACTGATCGAGCTTGAATTCGTGGAGATCGTGAATAGAGAAGAGATCGAACCGTATTTAACCGCGAGTTTCGAGCACGAAGACAGAGTTAGAAAATCC
GCTAAACGAAGCTTCTGCGAGTGTAAATGATCGATTGTTTCGCCAATCGCCATTGTTAACGAGCCTTTTCTTTTAATTCTTTCTTTCTTTCTTTCTTT
Protein sequenceShow/hide protein sequence
MSTDLDLRRTLLDIVRRPAIKLQIPRPSSMAADIQKERIDDSAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTASFEHEDRV
RKSAKRSFCECK