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Lcy13g007700 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy13g007700
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionreticulocalbin-2-like isoform X2
Genome locationChr13:7253875..7256922
RNA-Seq ExpressionLcy13g007700
SyntenyLcy13g007700
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601072.1 45 kDa calcium-binding protein, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3759.48Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADS++PKLLLWLC DVVRERD   DGKLN SEF P IF L+R  +EDYGS   DD+QMEA AKK  + L      YLSATELLPVIGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQP------------------TGYLKKNRMCDERKRRDKKARKF
        A+QQAEY ISQ                   T   K+NR+CD+RKRR + +  F
Subjt:  AKQQAEYTISQP------------------TGYLKKNRMCDERKRRDKKARKF

XP_008445899.1 PREDICTED: calumenin-B [Cucumis melo]1.9e-3472.07Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADSKSPKLLLWLCADVVRERD D DGKLN SEFFP I  LIR  +EDY SS+ +DE+ EALA+K  + L      +LS +ELLP+IGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

XP_011655504.1 calumenin-B [Cucumis sativus]2.5e-3471.17Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADSKS KLLLWLCADVVRERD D DGKLN SEFFP +  L+R  +EDY SS+ +DE+ EALAKK  + L      YLS TE+LP+IGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

XP_023525077.1 calumenin-B-like isoform X2 [Cucurbita pepo subsp. pepo]4.2e-3471.17Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADS++PKLLLWLC DVVRERD   DGKL+ SEF P IF L+R  +EDYGS   DD+QMEA AKK  + L      YLSATELLPVIGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        A+QQAEY ISQ
Subjt:  AKQQAEYTISQ

XP_038892509.1 calumenin-B-like [Benincasa hispida]3.2e-3466.14Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLLLYR---YLSATELLPVIGKIHPSEAYY
        FLHPADSKSPKLLLWLCADVVRERD D DGKLN SEFFP IF L+R  +EDY S + DD+++EA AKK    L      YLS TELLP+IGKIHP EAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLLLYR---YLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTI----SQPTGYLKKNRMCD
        AKQQAEY I    S   G L  N M D
Subjt:  AKQQAEYTI----SQPTGYLKKNRMCD

TrEMBL top hitse value%identityAlignment
A0A0A0KT37 Uncharacterized protein1.2e-3471.17Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADSKS KLLLWLCADVVRERD D DGKLN SEFFP +  L+R  +EDY SS+ +DE+ EALAKK  + L      YLS TE+LP+IGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

A0A1S3BDS4 calumenin-B9.1e-3572.07Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADSKSPKLLLWLCADVVRERD D DGKLN SEFFP I  LIR  +EDY SS+ +DE+ EALA+K  + L      +LS +ELLP+IGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

A0A5A7SY06 Calumenin-B9.1e-3572.07Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADSKSPKLLLWLCADVVRERD D DGKLN SEFFP I  LIR  +EDY SS+ +DE+ EALA+K  + L      +LS +ELLP+IGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

A0A6J1KJ28 reticulocalbin-2-like isoform X22.6e-3472.07Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADS++PKLLLWLC DVVRERD   DGKL+ SEF P IF L+R  +EDYGS   DD+QMEA AKK  + L      YLSATELLPVIGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQ
        AKQQAEY ISQ
Subjt:  AKQQAEYTISQ

A0A6J1KJ36 reticulocalbin-2-like isoform X32.0e-3465.32Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY
        FLHPADS++PKLLLWLC DVVRERD   DGKL+ SEF P IF L+R  +EDYGS   DD+QMEA AKK  + L      YLSATELLPVIGKIHPSEAYY
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLL---LYRYLSATELLPVIGKIHPSEAYY

Query:  AKQQAEYTISQPTGYLKKNRMCDE
        AKQQAEY ISQ         +C +
Subjt:  AKQQAEYTISQPTGYLKKNRMCDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08580.1 Calcium-binding EF hand family protein2.4e-2753.57Show/hide
Query:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLLLYR----YLSATELLPVIGKIHPSEAY
        FLHPAD+K+PKLLLWLC + VRERD+D DGK++  EFF G+F  +R+ EED  +S      +     K +   L +    YLS  ELLP+I KIHP+E Y
Subjt:  FLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLLLYR----YLSATELLPVIGKIHPSEAY

Query:  YAKQQAEYTISQ
        YAKQQA+Y ISQ
Subjt:  YAKQQAEYTISQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGAAAAAGAGTTCATATTTCATCGGTTTCTCTTACTCGATACTTAACGAGCCATGATCTACTTGTTTTCAGTTTCTTGCATCCTGCTGACAGCAAGAGCCCAAA
GCTACTTCTATGGCTGTGTGCAGATGTGGTAAGGGAAAGAGATGCAGACAATGATGGAAAGCTCAACCTCAGTGAGTTTTTCCCTGGAATTTTTTACTTAATAAGAAGTG
GCGAAGAAGATTACGGTTCTTCAGATCAGGATGATGAACAAATGGAGGCACTGGCGAAAAAGTATATTGTTCTGCTTCTTTACAGGTACCTTTCAGCAACAGAACTGCTT
CCTGTAATTGGAAAAATCCATCCATCAGAGGCTTACTATGCAAAACAACAAGCAGAATACACCATCTCTCAGCCCACAGGTTATTTAAAGAAAAACAGAATGTGCGACGA
GCGAAAACGGCGCGACAAGAAAGCTCGAAAATTTTCAGGAGATTTTGCTTTACAAATTATTTGTATAGGTGATTTGCTTGCTTGTTTATCATTCCTTTCTAGCTTAGTTT
TGTTGGAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CAAATTCAAACTAAAAACAACCCCTTCATCTTCCTAACACAAACAACTTTTCTTGATCAAACTCTAACCTCTGCATTTTCACAAATCAAAACCAAAACCAATCTCCGAAA
ATGGTGAAAATCTCCATTTTCATCTGCACATCAATCTTTTCCCTTCTCCTATTCTTCACTTCTCACACCTCAATTCGACACCATTCCCACTCCAATGCCGCCGACTCCCA
CCCCGAGTGGGAAGAGTTCATCAACGACGAGGATAGGTTCAATGTCACCGAAAGATTGGTGTCCCTTTTCCCCAAAATCGACGTCGATCCTCATGATGGGTTCGTGTCTG
CGGAGGAATTGACTCGGTGGAACTTGCAGCAGGCCTTGAACGAGGCTCTGCATCGGACTGAAAGGGAATTTCAATCTCACGATGAGAATCGTGATGGGTTCGTTTCCTTT
GCTGAGTACGAGCCGCCCAGTTGTTCTTGATCGTTCTAGCTTCTTTTTCAATTGGATTTTACTGTTGTCTGGTTCTTGATTTTGGATCCTCTGCAAATTAATGTGCTGCT
GTTTGGTGAAGTTGGATTTTAGTATCTTTTGTCGGTTACTTTGGCAATTTAGTACTTTATGGCAATGGTTCTTTCAGCTATGATCTTGGCTGGTGGAATGAGGAGCACTT
CAATGCATCAGGTGCAAATGGGGATGGGGTTTTGGACATAACTGAATTCGATGAGTAATCTTCAAAAACTTCACCGTGTCTCTTTTATCCGTATTCTGTTTGAAAATGCC
AAGAAAAAGAGTTCATATTTCATCGGTTTCTCTTACTCGATACTTAACGAGCCATGATCTACTTGTTTTCAGTTTCTTGCATCCTGCTGACAGCAAGAGCCCAAAGCTAC
TTCTATGGCTGTGTGCAGATGTGGTAAGGGAAAGAGATGCAGACAATGATGGAAAGCTCAACCTCAGTGAGTTTTTCCCTGGAATTTTTTACTTAATAAGAAGTGGCGAA
GAAGATTACGGTTCTTCAGATCAGGATGATGAACAAATGGAGGCACTGGCGAAAAAGTATATTGTTCTGCTTCTTTACAGGTACCTTTCAGCAACAGAACTGCTTCCTGT
AATTGGAAAAATCCATCCATCAGAGGCTTACTATGCAAAACAACAAGCAGAATACACCATCTCTCAGCCCACAGGTTATTTAAAGAAAAACAGAATGTGCGACGAGCGAA
AACGGCGCGACAAGAAAGCTCGAAAATTTTCAGGAGATTTTGCTTTACAAATTATTTGTATAGGTGATTTGCTTGCTTGTTTATCATTCCTTTCTAGCTTAGTTTTGTTG
GAGTCTTAG
Protein sequenceShow/hide protein sequence
MPRKRVHISSVSLTRYLTSHDLLVFSFLHPADSKSPKLLLWLCADVVRERDADNDGKLNLSEFFPGIFYLIRSGEEDYGSSDQDDEQMEALAKKYIVLLLYRYLSATELL
PVIGKIHPSEAYYAKQQAEYTISQPTGYLKKNRMCDERKRRDKKARKFSGDFALQIICIGDLLACLSFLSSLVLLES