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Lcy13g014190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy13g014190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr13:30185491..30185904
RNA-Seq ExpressionLcy13g014190
SyntenyLcy13g014190
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG49522.1 hypothetical protein EZV62_025397 [Acer yangbiense]1.3e-1233.86Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +RGG WSFD AL +L EP G  +I+ ++F K                      LG+ IG  +  +D  SG   G+ + V++ VD+ +PL+R   V +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHIS
          +  + + YE+LPD  Y CGR+GH+S
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHIS

TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]5.2e-1433.85Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +RGG WSFD AL +L EP G  +I+ ++F K                      LG+ IG  +  +D  SG   G+ +RV++ VD+ +PL+R   V +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHEC
          +  + + YE+LPD  Y CGR+GH+  +C
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHEC

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.2e-1231.3Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYVE-------------------ALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGS
        + GG W FD  L +L E  G   +  L+FR YV                     LG  +G  +  +  ESG+  G+ +R+++ +D+  PLKR   V +G 
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYVE-------------------ALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGS

Query:  KAGKKWICITYEKLPDFSYFCGRLGHISHEC
              + I YE+LP+F Y+CG++GH+  +C
Subjt:  KAGKKWICITYEKLPDFSYFCGRLGHISHEC

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.3e-1234.09Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +R G W+FD AL ++  P   +    ++FR                       LGN+IG FE  E N +    G  LRV+++ D+ +PL R   + +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHECEE
         G  WI I YE+LPDF Y CGRL HI  +C +
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHECEE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.0e-1838.93Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        M+ G W FD AL +L +P    NI  LEF +                      LGN+IG+F   + NE G   G +LR+++ +DI +PL+R   + I   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHECE
         G  WI I YE+LPDF YFCG +GH SH+C+
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHECE

TrEMBL top hitse value%identityAlignment
A0A0A0LNB5 CCHC-type domain-containing protein2.3e-1551.19Show/hide
Query:  RKYVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSKAGKKWICITYEKLPDFSYFCGRLGHISHECE
        RKYV AL NSI SFE  E++E  +  GE L+V+ K+D+ + L   TN+++G+ A +K I +TYEKL DF Y CG LGH+  ECE
Subjt:  RKYVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSKAGKKWICITYEKLPDFSYFCGRLGHISHECE

A0A5C7GYX1 Uncharacterized protein6.2e-1333.86Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +RGG WSFD AL +L EP G  +I+ ++F K                      LG+ IG  +  +D  SG   G+ + V++ VD+ +PL+R   V +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHIS
          +  + + YE+LPD  Y CGR+GH+S
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHIS

A0A5C7GZQ4 CCHC-type domain-containing protein2.5e-1433.85Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +RGG WSFD AL +L EP G  +I+ ++F K                      LG+ IG  +  +D  SG   G+ +RV++ VD+ +PL+R   V +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYV------------------EALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHEC
          +  + + YE+LPD  Y CGR+GH+  +C
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHEC

A0A6J1BSZ1 uncharacterized protein LOC1110054816.2e-1334.09Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        +R G W+FD AL ++  P   +    ++FR                       LGN+IG FE  E N +    G  LRV+++ D+ +PL R   + +   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHECEE
         G  WI I YE+LPDF Y CGRL HI  +C +
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHECEE

A0A6J1DU55 uncharacterized protein LOC1110231352.9e-1838.93Show/hide
Query:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK
        M+ G W FD AL +L +P    NI  LEF +                      LGN+IG+F   + NE G   G +LR+++ +DI +PL+R   + I   
Subjt:  MRGGSWSFDDALNLLMEPRGDSNIKSLEFRK------------------YVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSK

Query:  AGKKWICITYEKLPDFSYFCGRLGHISHECE
         G  WI I YE+LPDF YFCG +GH SH+C+
Subjt:  AGKKWICITYEKLPDFSYFCGRLGHISHECE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAGGGTCGTGGAGCTTTGATGATGCTTTGAACCTTTTAATGGAGCCCAGAGGAGACAGCAACATTAAATCATTGGAGTTCAGGAAATATGTTGAAGCCTTAGG
AAACTCCATAGGATCATTCGAAGCCACAGAAGACAATGAAAGTGGAAAAATAAAAGGGGAAACGCTGAGGGTGAAGATTAAGGTAGACATCAATGAACCCCTAAAAAGAC
GAACCAATGTCCAAATAGGGTCGAAGGCGGGAAAAAAATGGATATGTATCACCTACGAGAAGCTCCCAGACTTTTCCTACTTCTGTGGAAGATTGGGTCATATTTCTCAT
GAATGTGAAGAGGAGGAAGCTGAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGAGGGTCGTGGAGCTTTGATGATGCTTTGAACCTTTTAATGGAGCCCAGAGGAGACAGCAACATTAAATCATTGGAGTTCAGGAAATATGTTGAAGCCTTAGG
AAACTCCATAGGATCATTCGAAGCCACAGAAGACAATGAAAGTGGAAAAATAAAAGGGGAAACGCTGAGGGTGAAGATTAAGGTAGACATCAATGAACCCCTAAAAAGAC
GAACCAATGTCCAAATAGGGTCGAAGGCGGGAAAAAAATGGATATGTATCACCTACGAGAAGCTCCCAGACTTTTCCTACTTCTGTGGAAGATTGGGTCATATTTCTCAT
GAATGTGAAGAGGAGGAAGCTGAAACTTGA
Protein sequenceShow/hide protein sequence
MRGGSWSFDDALNLLMEPRGDSNIKSLEFRKYVEALGNSIGSFEATEDNESGKIKGETLRVKIKVDINEPLKRRTNVQIGSKAGKKWICITYEKLPDFSYFCGRLGHISH
ECEEEEAET