; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G000090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr01:134123..144801
RNA-Seq ExpressionLsi01G000090
SyntenyLsi01G000090
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134515.2 uncharacterized protein LOC101220880 isoform X1 [Cucumis sativus]3.8e-11890.25Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TN+GAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ NSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA 
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-

Query:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        GRFPRG DGYLG    SSGAWLGSQ G+HYVSWPRT
Subjt:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

XP_008439422.1 PREDICTED: uncharacterized protein LOC103484236 isoform X1 [Cucumis melo]1.3e-11889.79Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ANSHT +QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        RFP GQ+GYLG     SGAWLGSQ G+HYV+WPRT
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

XP_023544797.1 uncharacterized protein LOC111804281 [Cucurbita pepo subsp. pepo]3.3e-11790.64Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM T RISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQ V KRL+RHRIPYLPVD R+S TSSQQWYKLTGNI+PSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFL+SSMDGSVRLYDHRLIQRGAVQTYDG+ANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        RFPR Q+GYLG    SSGAWLGSQGGLHYVS+PR+
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

XP_031743496.1 uncharacterized protein LOC101220880 isoform X2 [Cucumis sativus]3.8e-11890.25Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TN+GAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ NSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA 
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-

Query:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        GRFPRG DGYLG    SSGAWLGSQ G+HYVSWPRT
Subjt:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

XP_038877526.1 uncharacterized protein LOC120069787 [Benincasa hispida]3.7e-12193.19Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        T+MGAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEVV RLLRHRIPYLPVDRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFLASSMDGSVRLYDHRLIQRGAVQTYDG+ANSHTRIQLGVDPTETFVASGGED NFRLWNIKSGKLIFEDKFVDAVPSTICWRR  
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        RFPRGQDGYLG    SSGAWLGS GGLHYVSWPRT
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

TrEMBL top hitse value%identityAlignment
A0A0A0KMD9 WD_REPEATS_REGION domain-containing protein1.9e-11890.25Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TN+GAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ NSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA 
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-

Query:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        GRFPRG DGYLG    SSGAWLGSQ G+HYVSWPRT
Subjt:  GRFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

A0A1S3AYQ0 uncharacterized protein LOC103484236 isoform X16.4e-11989.79Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ANSHT +QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        RFP GQ+GYLG     SGAWLGSQ G+HYV+WPRT
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

A0A1S3AZD8 uncharacterized protein LOC103484236 isoform X26.6e-11688.94Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ANSHT +QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
           RGQ+GYLG     SGAWLGSQ G+HYV+WPRT
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

A0A5A7UFC1 DDB1-and CUL4-associated factor 4-like isoform X11.6e-11789.79Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM TGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQEV KRLLRHRIPYLP+DRRNS TSSQQWYKLTGNIFPSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFLASSMDGSV+LYDHRLIQRGAVQTYDG+ANSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
           RGQ+GYLG     SGAWLGSQGG+HYV+WPRT
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

A0A6J1ILI1 uncharacterized protein LOC1114785341.0e-11690.21Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS
        TNMGAASVDM T RISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTID+RERQ V KRL+RHRIPYLPVD R+S TSSQQWYKLTGNI+PSCTVKMPS
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTTSSQQWYKLTGNIFPSCTVKMPS

Query:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
        SISSL SLQFDD YFL+SSMDGSVRLYDHRLIQRGAVQTYDG+ANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG
Subjt:  SISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG

Query:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT
        R PR Q+GYLG    SSGAWLGSQGGLHYVS+PR+
Subjt:  RFPRGQDGYLG----SSGAWLGSQGGLHYVSWPRT

SwissProt top hitse value%identityAlignment
A0A1P8AW69 Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.13.9e-0437.5Show/hide
Query:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        FLAS S D ++R++D R  ++G +QTY G+    + I+    P   +V SGG D   ++W++ +GKL+ E K
Subjt:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

F4HTH8 Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.21.3e-0436.99Show/hide
Query:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF
        FLAS S D +++++D R  ++G +QTY G++   + I+    P   +V SGG D   ++W++ +GKL+ E KF
Subjt:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF

F4KB17 Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.35.0e-0433.78Show/hide
Query:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        +F + S+D +++++D R  ++G + TY G    HTR    L   P   ++ SGGED   ++W++ +GKL+ E K
Subjt:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

Q8H0T9 Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.45.0e-0435.14Show/hide
Query:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        +F + S+D +++++D R  ++G + TY G    HTR    L   P   +V SGGED   ++W++ +GKL+ E K
Subjt:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein2.7e-0537.5Show/hide
Query:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        FLAS S D ++R++D R  ++G +QTY G+    + I+    P   +V SGG D   ++W++ +GKL+ E K
Subjt:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein9.4e-0636.99Show/hide
Query:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF
        FLAS S D +++++D R  ++G +QTY G++   + I+    P   +V SGG D   ++W++ +GKL+ E KF
Subjt:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF

AT1G61210.2 Transducin/WD40 repeat-like superfamily protein9.4e-0636.99Show/hide
Query:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF
        FLAS S D +++++D R  ++G +QTY G++   + I+    P   +V SGG D   ++W++ +GKL+ E KF
Subjt:  FLAS-SMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF

AT5G17370.1 Transducin/WD40 repeat-like superfamily protein1.9e-5445.61Show/hide
Query:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQ-EVVKRLLRHRIPYLPVDRRNSTTSSQQWY---------------
        T++GA  VD+ TG  S+ L  KSD+FALQ   S N+V CGLRNG IV++D RER      RL RH+I Y    +   T++ +QW+               
Subjt:  TNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQ-EVVKRLLRHRIPYLPVDRRNSTTSSQQWY---------------

Query:  --KLTGNIFPSCTVKMPSSISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRG-AVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLI
          +L GNI PS  + MPSS++ L +L+  D Y +ASSMDG+++LYD R+++RG  VQTY+G+ NSHT I+ G+DP+E F+ SGG+DC  R+W+IKSG+L+
Subjt:  --KLTGNIFPSCTVKMPSSISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRG-AVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLI

Query:  FEDKFVDAVPSTICWRRAGRFPRGQDGYLGSSGAWLGSQ
         E+KF ++VPS +CW    R    +D      GAWLGS+
Subjt:  FEDKFVDAVPSTICWRRAGRFPRGQDGYLGSSGAWLGSQ

AT5G23430.1 Transducin/WD40 repeat-like superfamily protein3.6e-0535.14Show/hide
Query:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        +F + S+D +++++D R  ++G + TY G    HTR    L   P   +V SGGED   ++W++ +GKL+ E K
Subjt:  YFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTR--IQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTGCTTACAGTTCTCAATCATGATTCACAATTTTAATCTTGAATTGCCGTATGGTACCATGAACTTGATGATTGAGGAGATATGGGAGAGGACGAACATGGGAGC
TGCTTCAGTTGATATGGTAACTGGCAGGATATCATGGATCTTACATGGTAAAAGTGACATTTTTGCGCTACAACTCATTCATTCGGAAAATGTTGTTCTGTGTGGACTTA
GAAATGGCATGATTGTGACAATTGATAGTCGTGAAAGACAGGAAGTAGTTAAGAGACTTTTAAGGCATCGAATTCCTTACTTGCCTGTAGATAGAAGAAACTCCACAACG
TCTTCTCAGCAATGGTATAAGCTCACTGGGAACATTTTTCCTTCTTGTACGGTTAAAATGCCTTCATCCATATCAAGCTTGGCGTCGCTTCAGTTTGATGACTGTTACTT
TTTGGCAAGCTCCATGGATGGATCGGTAAGACTCTATGATCATCGACTTATCCAGAGAGGTGCTGTACAAACCTATGATGGGAATGCAAATTCACATACTCGTATACAGC
TTGGAGTTGATCCCACTGAAACGTTTGTCGCATCTGGTGGAGAAGACTGCAATTTTCGTCTATGGAATATCAAGTCTGGAAAACTGATCTTTGAGGATAAGTTTGTTGAT
GCTGTCCCCTCAACCATATGTTGGCGAAGGGCTGGAAGATTTCCAAGAGGGCAGGATGGATACCTAGGCTCTTCGGGAGCATGGCTTGGGTCACAAGGAGGACTTCATTA
TGTGAGCTGGCCAAGGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTGCTTACAGTTCTCAATCATGATTCACAATTTTAATCTTGAATTGCCGTATGGTACCATGAACTTGATGATTGAGGAGATATGGGAGAGGACGAACATGGGAGC
TGCTTCAGTTGATATGGTAACTGGCAGGATATCATGGATCTTACATGGTAAAAGTGACATTTTTGCGCTACAACTCATTCATTCGGAAAATGTTGTTCTGTGTGGACTTA
GAAATGGCATGATTGTGACAATTGATAGTCGTGAAAGACAGGAAGTAGTTAAGAGACTTTTAAGGCATCGAATTCCTTACTTGCCTGTAGATAGAAGAAACTCCACAACG
TCTTCTCAGCAATGGTATAAGCTCACTGGGAACATTTTTCCTTCTTGTACGGTTAAAATGCCTTCATCCATATCAAGCTTGGCGTCGCTTCAGTTTGATGACTGTTACTT
TTTGGCAAGCTCCATGGATGGATCGGTAAGACTCTATGATCATCGACTTATCCAGAGAGGTGCTGTACAAACCTATGATGGGAATGCAAATTCACATACTCGTATACAGC
TTGGAGTTGATCCCACTGAAACGTTTGTCGCATCTGGTGGAGAAGACTGCAATTTTCGTCTATGGAATATCAAGTCTGGAAAACTGATCTTTGAGGATAAGTTTGTTGAT
GCTGTCCCCTCAACCATATGTTGGCGAAGGGCTGGAAGATTTCCAAGAGGGCAGGATGGATACCTAGGCTCTTCGGGAGCATGGCTTGGGTCACAAGGAGGACTTCATTA
TGTGAGCTGGCCAAGGACATAAGTGAACATGAACTTGCACGAGGATTTCTGGCCAGCTTTCCAAAATTATGATACTTTAACCTTCAAAGAAGTTATGCTTTTACGTAGAC
ATGATTCAGTTAGGACTAGGAATGAAGCCACTCAGCAATCCATCAAGAAGCAAGCTCGTGCTCGTGTTTGGAAACAACATGATAACAATGACAGTGACCAACAAGTAATG
CACTCATTTTTTAGTCTTGTTTGCCATTTCTA
Protein sequenceShow/hide protein sequence
MWCLQFSIMIHNFNLELPYGTMNLMIEEIWERTNMGAASVDMVTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDSRERQEVVKRLLRHRIPYLPVDRRNSTT
SSQQWYKLTGNIFPSCTVKMPSSISSLASLQFDDCYFLASSMDGSVRLYDHRLIQRGAVQTYDGNANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVD
AVPSTICWRRAGRFPRGQDGYLGSSGAWLGSQGGLHYVSWPRT