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Lsi01G000130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEGF_CA domain-containing protein
Genome locationchr01:182238..184500
RNA-Seq ExpressionLsi01G000130
SyntenyLsi01G000130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134518.1 uncharacterized protein LOC101221511 [Cucumis sativus]1.6e-4790Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMDVAP STS+AADAAMDV++DDCSRS+ LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_008439430.1 PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo]1.1e-4892.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SPFTSN STMDVA ASTS+A DAAMDV+MDDCSRSNTLKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_022978967.1 uncharacterized protein LOC111478758 [Cucurbita maxima]7.5e-4589.17Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSN STMDVA AS ST AD+AMDVEM++   S TLK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_023544802.1 uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo]3.7e-4488.33Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSPFTSN STMDVA AS ST AD+AMDVEM+    S TLK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_038877484.1 uncharacterized protein LOC120069761 [Benincasa hispida]7.8e-5095.83Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVR SPFTSN STMDVA ASTST AD AMDVEMDDCSRSNTLKPVGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
TrEMBL top hitse value%identityAlignment
A0A0A0KJ42 Uncharacterized protein7.8e-4890Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMDVAP STS+AADAAMDV++DDCSRS+ LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A1S3AZE5 uncharacterized protein LOC1034842415.4e-4992.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SPFTSN STMDVA ASTS+A DAAMDV+MDDCSRSNTLKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A5A7UG11 Uncharacterized protein5.4e-4992.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SPFTSN STMDVA ASTS+A DAAMDV+MDDCSRSNTLKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1EC45 uncharacterized protein LOC1114329821.5e-4387.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSP TSN STMDVA AS ST AD+AMDVEM+    S TLK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1IMI5 uncharacterized protein LOC1114787583.6e-4589.17Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSN STMDVA AS ST AD+AMDVEM++   S TLK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30880.1 unknown protein8.7e-1551.2Show/hide
Query:  MAKSMRSKREKRLRAIRREMV--DPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTS----NTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIG
        MAKSMR KR KRLRAIRRE+V  + F   ++ AK AA EAALAAPKLPVR +P +      T + + A AST+ A D+  D EMDD  ++ +LKP   IG
Subjt:  MAKSMRSKREKRLRAIRREMV--DPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTS----NTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIG

Query:  KKSKRKFKVGKAKRRGKCKIKRNRH
        KK K+KFK+G   RR K  ++  R+
Subjt:  KKSKRKFKVGKAKRRGKCKIKRNRH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAAGA
GGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTTTCACCTCCAATACCTCTACTATGGATGTCGCACCAGCCTCTACTTCTACCGCCGCCGACGCTGCTA
TGGATGTGGAGATGGATGATTGCAGTCGAAGCAACACGCTAAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGT
AAGTGCAAGATCAAGAGGAATCGCCACATTTAA
mRNA sequenceShow/hide mRNA sequence
CAAACACACGTGAAGTCCGGGAGTGAGGGGCCTTTTCGGAATTAAGAGAGTGAAGGCTCTTAAGAAAACCCTATTTCGCCCAGAACCCTAAAATTGGCCGGCGACGCAAT
CAAAGCAACCTGAGTCAGCGGTGCGAGGAAGCTCATCGGAGAGAAGAAAAATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATG
GTTGACCCTTTTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTTTCACCTCCAATACCTC
TACTATGGATGTCGCACCAGCCTCTACTTCTACCGCCGCCGACGCTGCTATGGATGTGGAGATGGATGATTGCAGTCGAAGCAACACGCTAAAGCCTGTAGGTGGAATTG
GCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAATCGCCACATTTAAGCCCTCATAGATGGGTATCGGGAATAT
TTTCCCCCATGGCCAGTATTATTTCAGTTCATTTGTCACACTTGAAATTTTGGAGTAGGCTAAGTCTGAAGATATAACTGCCCTGTTCAACTCATGGCTTTTCATGTTTT
TTTTTTTTTTTTTTTCTTTTTCTTTTTGGGATCTAAATTCCGAGTTAGATGCTTACCTAATGTTATACAATCTGGCTTTCGTAGACTTGATTGGTGCTGTCAAATGTAGC
GAATACCAAATAGTTGAAATTCCTAGGATGGCACTTTGTTAAAGAAGGTAGCAACTAGTTGGCTAATATTTGACACAAACTGACCTCCGACTTACAAGTCCACGATTAGG
AACTTGTTTATGTATTACGGGTTAGAAGCTTGTTGTGAAATATGAAACATATGGGGGCGGGCATTTCCTTTCGAGCATAAAACTGCGTCCCGTTTTATTAGATCATTCAG
ATAGTACCTTCATGTTTACTCAAGTTTCATTATTTAACCAAAAAACTAAGTACACCAACTCTGTTGATAATTTAATTATTTCCTTTCTGACAATTGACAATGACATCATG
ATTTAAATTATGAATTTTCTTTTAACGAAAGTCTCAACTTTGGTTTGGAAGTGAAATAGTCAAATTCTCCCTTCCTTTA
Protein sequenceShow/hide protein sequence
MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNTSTMDVAPASTSTAADAAMDVEMDDCSRSNTLKPVGGIGKKSKRKFKVGKAKRRG
KCKIKRNRHI