; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G000320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:357595..357984
RNA-Seq ExpressionLsi01G000320
SyntenyLsi01G000320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026395.1 hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-4982.95Show/hide
Query:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY
        M QMWLLWWPKN   +S++AKT+TSS T AVTATSLA K SSSHCN +AKLLRKLKKR RVLCSTTGESSS FQCRYDPLSYSLNFDTSGCGSLLDEHYY
Subjt:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY

Query:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR
        Q+CAFSSRFASNPG VS  APD TVT SR
Subjt:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR

XP_022925663.1 uncharacterized protein LOC111433012 [Cucurbita moschata]7.1e-4986.51Show/hide
Query:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC
        MWLLWWPKNNA  S+ AKT TSS   AVTATSLARK SSS+CNC AKLLRKLKKRSRVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQYC
Subjt:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC

Query:  AFSSRFASNPGNVSHSAPDVTVTTSR
        AFSSRFASNPGNVSHSAP  TVTTSR
Subjt:  AFSSRFASNPGNVSHSAPDVTVTTSR

XP_022977244.1 uncharacterized protein LOC111477613 [Cucurbita maxima]2.1e-4887.3Show/hide
Query:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC
        MWLLWWPKNNA  SS AKT TSS   AVTATSLARK SSS+ NC AKLLRKLKKRSRVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQYC
Subjt:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC

Query:  AFSSRFASNPGNVSHSAPDVTVTTSR
        AFSSRFASNPGNVSHSAP VTVTTSR
Subjt:  AFSSRFASNPGNVSHSAPDVTVTTSR

XP_023518962.1 uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo]1.4e-4983.72Show/hide
Query:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY
        M QMWLLWWPKN   +S++AKT+TSS TGAVTATSLA K SSSHCN +AKLLRKLKKR RVLCSTTGESSS FQCRYDPLSYSLNFDTSGCGSLLDEHYY
Subjt:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY

Query:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR
        Q+CAFSSRFASNPG VS  APD TVT SR
Subjt:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR

XP_023543928.1 uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo]1.9e-4987.3Show/hide
Query:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC
        MWLLWWPKNNA  S+ AKT TSS + AVTATSLARK SSS+CNC AKLLRKLKKRSRVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQYC
Subjt:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC

Query:  AFSSRFASNPGNVSHSAPDVTVTTSR
        AFSSRFASNPGNVSHSAP VTVTTSR
Subjt:  AFSSRFASNPGNVSHSAPDVTVTTSR

TrEMBL top hitse value%identityAlignment
A0A6J1CYQ9 uncharacterized protein LOC1110158121.0e-4883.08Show/hide
Query:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPS-SSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHY
        MTQMWLLWWPK   + S+  KTTTSS T AVTATSLA+K S SSHCNC+AKLLRKLKKR RVLCST+GE SSAFQCRYDPLSYSLNFDTSGCGSLLDE Y
Subjt:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPS-SSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHY

Query:  YQYCAFSSRFASNPGNVSHSAPDVTVTTSR
        YQ+CAFSSRFASNPGN SHS PDVTVT SR
Subjt:  YQYCAFSSRFASNPGNVSHSAPDVTVTTSR

A0A6J1EF60 uncharacterized protein LOC1114336471.0e-4882.17Show/hide
Query:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY
        M QMWLLWWPKN   +S++AKT+TSS T AVTATSLA K SSSHCN +AKLLRKLKKR RVLCSTTGESSS FQCRYDPLSYSLNFDTSGCGSLLDEHYY
Subjt:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY

Query:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR
        Q+C FSSRFASNPG VS  APD TVT SR
Subjt:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR

A0A6J1EFV9 uncharacterized protein LOC1114330123.4e-4986.51Show/hide
Query:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC
        MWLLWWPKNNA  S+ AKT TSS   AVTATSLARK SSS+CNC AKLLRKLKKRSRVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQYC
Subjt:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC

Query:  AFSSRFASNPGNVSHSAPDVTVTTSR
        AFSSRFASNPGNVSHSAP  TVTTSR
Subjt:  AFSSRFASNPGNVSHSAPDVTVTTSR

A0A6J1IQV7 uncharacterized protein LOC1114776131.0e-4887.3Show/hide
Query:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC
        MWLLWWPKNNA  SS AKT TSS   AVTATSLARK SSS+ NC AKLLRKLKKRSRVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQYC
Subjt:  MWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYC

Query:  AFSSRFASNPGNVSHSAPDVTVTTSR
        AFSSRFASNPGNVSHSAP VTVTTSR
Subjt:  AFSSRFASNPGNVSHSAPDVTVTTSR

A0A6J1KS95 uncharacterized protein LOC1114971672.2e-4881.4Show/hide
Query:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY
        M QMWLLWWPKN   +S++AK++T S TGAV+ATSLA K SSSHCN +AKLLRKLKKR RVLCSTTGESSS FQCRYDPLSYSLNFDTSGCGSLLDEHYY
Subjt:  MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYY

Query:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR
        Q+CAFSSRFASNPG VS  APD TVT SR
Subjt:  QYCAFSSRFASNPGNVSHSAPDVTVTTSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19980.1 unknown protein7.1e-1545.1Show/hide
Query:  SSTTGAVTATSLARKPSSSHC-NCLAKLLRKLKKRSRVL--CSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLD--EHYYQYCAFSSRFASNPGNVSHS
        ++T  AVT  S    P+ + C  CLA+L+RKLKK+ R+L   ST     S+ QCRYDP+SYSLNFD   CG+L D  ++Y ++ AFSSR+ +   N+   
Subjt:  SSTTGAVTATSLARKPSSSHC-NCLAKLLRKLKKRSRVL--CSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLD--EHYYQYCAFSSRFASNPGNVSHS

Query:  AP
         P
Subjt:  AP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCAAATGTGGCTTCTCTGGTGGCCGAAGAACAACGCCTCCACCTCCTCCTCCGCCAAAACTACCACTTCCTCCACCACCGGCGCCGTTACTGCCACTTCGCTCGC
CCGGAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAACTGCTACGCAAACTGAAGAAACGCAGCAGAGTACTGTGTAGCACCACCGGAGAGAGCAGCAGCGCCTTCC
AATGCCGCTACGATCCTTTGAGCTACTCTCTTAATTTCGACACGAGCGGCTGCGGAAGCTTGTTAGATGAACATTACTATCAGTACTGCGCTTTCTCTTCGAGATTCGCG
TCCAATCCAGGAAATGTTTCTCATTCTGCTCCCGATGTAACAGTCACTACTTCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCAAATGTGGCTTCTCTGGTGGCCGAAGAACAACGCCTCCACCTCCTCCTCCGCCAAAACTACCACTTCCTCCACCACCGGCGCCGTTACTGCCACTTCGCTCGC
CCGGAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAACTGCTACGCAAACTGAAGAAACGCAGCAGAGTACTGTGTAGCACCACCGGAGAGAGCAGCAGCGCCTTCC
AATGCCGCTACGATCCTTTGAGCTACTCTCTTAATTTCGACACGAGCGGCTGCGGAAGCTTGTTAGATGAACATTACTATCAGTACTGCGCTTTCTCTTCGAGATTCGCG
TCCAATCCAGGAAATGTTTCTCATTCTGCTCCCGATGTAACAGTCACTACTTCTCGCTAG
Protein sequenceShow/hide protein sequence
MTQMWLLWWPKNNASTSSSAKTTTSSTTGAVTATSLARKPSSSHCNCLAKLLRKLKKRSRVLCSTTGESSSAFQCRYDPLSYSLNFDTSGCGSLLDEHYYQYCAFSSRFA
SNPGNVSHSAPDVTVTTSR