; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G000390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVQ domain-containing protein
Genome locationchr01:446290..446838
RNA-Seq ExpressionLsi01G000390
SyntenyLsi01G000390
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052442.1 VQ domain-containing protein [Cucumis melo var. makuwa]9.9e-8185.87Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQWG QFY HH+HG+AS SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDGRLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDED +YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

KAG6581510.1 hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6176Show/hide
Query:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH
        +S +SDQW AQFY   HG A  S+AV    P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFG+AGD+ 
Subjt:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH

Query:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGN
         HNNHPSVMLPFSDGR  QLR+ P EH  P P  N GFS  AAELMEIQNLIDED NYDL+ELGMEF SSSGNGN
Subjt:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGN

XP_008441071.1 PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo]2.2e-8085.87Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQWG QFY HH+HG AS SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDGRLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDED +YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

XP_023544848.1 uncharacterized protein LOC111804320 [Cucurbita pepo subsp. pepo]2.4e-5873.71Show/hide
Query:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH
        +S +SDQW AQFY    G A  S+ V    P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFG+AGD+ 
Subjt:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH

Query:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGN
         HNNHPSVMLPFSDGR  QLR  P EH  P P    GF   AAELMEIQNLIDED NYDL+ELGMEFSSS+GNGN
Subjt:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGN

XP_038881626.1 VQ motif-containing protein 22-like [Benincasa hispida]5.4e-8790.61Show/hide
Query:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH
        MSITSDQW +QFYHH HG ASPSSA THHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA LPLGSHKGPVNLSFG+AGDDH
Subjt:  MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDH

Query:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYF
        LHNNH SVMLPFSDG++ QLRQ  PEHRFP P +NNGFSR AAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYF
Subjt:  LHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYF

TrEMBL top hitse value%identityAlignment
A0A0A0KII5 VQ domain-containing protein4.6e-7682.35Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQW  QFY HH+HG  S SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLR-QPPPEHRFPNPPENNGFSRQAA--ELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDG LLQ R Q  PEHRFP P E+NGFS   A  +LMEIQNLIDED +YDLQELGMEF SSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLR-QPPPEHRFPNPPENNGFSRQAA--ELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

A0A1S3B3C3 uncharacterized protein LOC1034852951.1e-8085.87Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQWG QFY HH+HG AS SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDGRLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDED +YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

A0A5D3CPL3 VQ domain-containing protein4.8e-8185.87Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQWG QFY HH+HG+AS SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDGRLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDED +YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

A0A6J1IJI1 uncharacterized protein LOC111478005 isoform X14.4e-5872.16Show/hide
Query:  SITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDHL
        S +SDQW AQFY   HG A  S+ V    P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSH+GPVNLSFG+AGD+  
Subjt:  SITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDHL

Query:  HNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYG
        HNNHPSVMLPFSDGR  QLR+ P EH  P P  N G S   AELMEIQNLIDED NYDL+ELGMEF  S+GNG  G
Subjt:  HNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYG

E5GCL8 VQ domain-containing protein1.1e-8085.87Show/hide
Query:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD
        MSITSDQWG QFY HH+HG AS SSAV HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFG+ GD
Subjt:  MSITSDQWGAQFY-HHAHGAASPSSAVTHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGD

Query:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSDGRLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDED +YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 229.2e-0542.05Show/hide
Query:  DQWGAQFYHH------AHGAASPSSAVTHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        ++W +QFY++          AS +   T  G  T+        T  ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DQWGAQFYHH------AHGAASPSSAVTHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein2.9e-0648.15Show/hide
Query:  PNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGS
        P    +S   PR+R+RASR+APTT+L   T+NFR +VQ+FTG  A+  + P  S
Subjt:  PNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGS

AT3G22160.1 VQ motif-containing protein6.5e-0642.05Show/hide
Query:  DQWGAQFYHH------AHGAASPSSAVTHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        ++W +QFY++          AS +   T  G  T+        T  ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DQWGAQFYHH------AHGAASPSSAVTHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

AT4G15120.1 VQ motif-containing protein5.5e-0528.95Show/hide
Query:  MSITSDQWGAQFYHHAHGAASPSSAVT---------HHGPNTNTNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVN
        M+ +++ W +QFY++     + +S VT             + +   ++KP RRRSRASR+ PTTL N  TANFR +VQQFTG  +A A     S    + 
Subjt:  MSITSDQWGAQFYHHAHGAASPSSAVT---------HHGPNTNTNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVN

Query:  LSFGRAGDDHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGY
         S   AG       + ++    +   L+Q ++P     +     NN         +   N +  D     +E      S  G G  GGGY
Subjt:  LSFGRAGDDHLHNNHPSVMLPFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGY

AT4G20000.1 VQ motif-containing protein5.3e-0862.26Show/hide
Query:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFG
        RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  A G +      KGPV L FG
Subjt:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFG

AT4G39720.1 VQ motif-containing protein5.0e-0630.73Show/hide
Query:  SSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLS-----FG-RAGDDHLHNNHPSVMLPFSD--
        SSA +   P  N   I K ++RSRASR+APTT+L   T+NFR +VQ+FTG  A     PL ++   VN +      G  +   + +N +  ++ PF+   
Subjt:  SSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLS-----FG-RAGDDHLHNNHPSVMLPFSD--

Query:  GRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFN------YDLQELGM--------EFSSSSGNGNYGGG
             L       ++ NP  NNGF     E M +Q L+    +      +D   LGM          ++++ NGN   G
Subjt:  GRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFN------YDLQELGM--------EFSSSSGNGNYGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCACCAGCGATCAATGGGGCGCCCAATTCTACCACCATGCCCACGGCGCCGCCTCGCCTTCTTCCGCCGTCACCCACCACGGCCCCAATACTAACACTAACTC
CATTTCCAAGCCCAGACGCCGCTCCAGAGCTTCCCGTAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTC
AGGCCGCCGGCGCCACCTTGCCTTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGCCGGGCTGGAGATGATCACCTCCATAACAACCACCCCTCTGTTATGCTC
CCTTTCTCCGACGGCCGACTTCTTCAACTCCGACAGCCGCCGCCGGAGCACCGGTTCCCCAACCCCCCGGAAAATAATGGGTTTTCACGGCAGGCGGCGGAATTGATGGA
AATTCAAAATCTGATTGATGAGGATTTCAATTACGATCTGCAGGAACTGGGGATGGAGTTTTCTTCTTCCAGTGGGAATGGGAATTACGGCGGTGGGTACTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCACCAGCGATCAATGGGGCGCCCAATTCTACCACCATGCCCACGGCGCCGCCTCGCCTTCTTCCGCCGTCACCCACCACGGCCCCAATACTAACACTAACTC
CATTTCCAAGCCCAGACGCCGCTCCAGAGCTTCCCGTAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTC
AGGCCGCCGGCGCCACCTTGCCTTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGCCGGGCTGGAGATGATCACCTCCATAACAACCACCCCTCTGTTATGCTC
CCTTTCTCCGACGGCCGACTTCTTCAACTCCGACAGCCGCCGCCGGAGCACCGGTTCCCCAACCCCCCGGAAAATAATGGGTTTTCACGGCAGGCGGCGGAATTGATGGA
AATTCAAAATCTGATTGATGAGGATTTCAATTACGATCTGCAGGAACTGGGGATGGAGTTTTCTTCTTCCAGTGGGAATGGGAATTACGGCGGTGGGTACTTCCATTGA
Protein sequenceShow/hide protein sequence
MSITSDQWGAQFYHHAHGAASPSSAVTHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATLPLGSHKGPVNLSFGRAGDDHLHNNHPSVML
PFSDGRLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDFNYDLQELGMEFSSSSGNGNYGGGYFH