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Lsi01G000500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWRKY domain-containing protein
Genome locationchr01:604891..605526
RNA-Seq ExpressionLsi01G000500
SyntenyLsi01G000500
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052460.1 putative WRKY transcription factor 35 [Cucumis melo var. makuwa]1.1e-1467.47Show/hide
Query:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR
        MLQISPS NKF TISS + NS   +NFLI NHSP       HPDH+LHHFLHH    N++NN + SAALHISSPRNPPGIKRR
Subjt:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR

XP_004134891.2 probable WRKY transcription factor 35 [Cucumis sativus]1.3e-4755.65Show/hide
Query:  MLLLFEMDNYEE-GDLTDIVRGGRS------------RSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD--HHQYNFGDPFCSSAA
        MLLLFEM+NYEE GDLTDIVRG  S             + SS+SNCKTE L D   +D+  +Y     +SS SQ    L LQD  HHQYNFGDPFCS  A
Subjt:  MLLLFEMDNYEE-GDLTDIVRGGRS------------RSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD--HHQYNFGDPFCSSAA

Query:  ASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT-------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSP
         S     LHQH     +DN+ N+ NAFFNG   +S+ TT        EDH  ++KS   NSN+FSRMLQISPSPNKF TISS + NS   +NFLI NHSP
Subjt:  ASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT-------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSP

Query:  P------HPDHNLHHFLH---HNHDNNPSASAALHISSPRNPPGIKRR
               HPDH+LHHFLH   HN++NN + S+ALHISSPRNPPGIKRR
Subjt:  P------HPDHNLHHFLH---HNHDNNPSASAALHISSPRNPPGIKRR

XP_008439520.1 PREDICTED: probable WRKY transcription factor 35 [Cucumis melo]7.8e-4553.54Show/hide
Query:  MLLLFEMDNYEE--GDLTDIVRG-----------GRSRSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD------HHQYNFGDPFC
        MLLLFEM+NY++  GDLTDIVRG             + + SS+SNCKTE L D   +D+  +Y     +SS SQ    L LQD      HHQY+FGDPFC
Subjt:  MLLLFEMDNYEE--GDLTDIVRG-----------GRSRSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD------HHQYNFGDPFC

Query:  SSAAASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT--------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLI
        S  A S     LHQH     +DN  N+ NAFFN GI+ S+ATT         EDH  ++KS   NSN+FSRMLQISPS NKF TISS + NS   +NFLI
Subjt:  SSAAASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT--------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLI

Query:  PNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR
         NHSP       HPDH+LHHFLHH    N++NN + SAALHISSPRNPPGIKRR
Subjt:  PNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR

XP_022146650.1 probable WRKY transcription factor 14 [Momordica charantia]6.8e-1742.22Show/hide
Query:  MDNYEEGDLTDIVRGGRSRSRSSTSNCKTE--LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQDHHQYNFGDPFCSSAAASASSLDLHQHQLD------
        M+NY +GDLTDIVRG    S S+T  CK E   G    E     +  H   S+  Q   Q   Q H   +FGDPFC++A       D   H+LD      
Subjt:  MDNYEEGDLTDIVRGGRSRSRSSTSNCKTE--LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQDHHQYNFGDPFCSSAAASASSLDLHQHQLD------

Query:  -----NTNNVNNAFFNGGITTSSATTQEDHELIIKSP---SNNSNIFSRMLQISPSPNKF--STISSSSL--NSSSNNFLIPNHSPPHPDHNLHHFLHHN
             + ++    FFNGG          DH L+IK+P   SNN+NIFSRMLQISPS NKF  S+  SS L  NS+S+  LI  +S        HHFL   
Subjt:  -----NTNNVNNAFFNGGITTSSATTQEDHELIIKSP---SNNSNIFSRMLQISPSPNKF--STISSSSL--NSSSNNFLIPNHSPPHPDHNLHHFLHHN

Query:  HDNNPSASAALHISSPRNPPGIKRR
         DN      A+ ISSPRNP GIKRR
Subjt:  HDNNPSASAALHISSPRNPPGIKRR

XP_038881354.1 probable WRKY transcription factor 35 [Benincasa hispida]6.1e-5064.96Show/hide
Query:  MDNYEEGDLTDIVRGGRSRSRSS------TSNCKTEL---GDQ-EEEDNNYYYNPHDQW-----SSCSQFSSQLLL------QDHHQYNFGDPFCSSAAA
        M+NYEEGDLTDIVRGGR RSRSS      TSNCKTE    GDQ EEED+NY YN   QW     SS SQFSSQLLL        HHQYNFGDPFC     
Subjt:  MDNYEEGDLTDIVRGGRSRSRSS------TSNCKTEL---GDQ-EEEDNNYYYNPHDQW-----SSCSQFSSQLLL------QDHHQYNFGDPFCSSAAA

Query:  SASSLDLHQHQLDNTNNVNNAFFNGGITTSSATTQEDHE----LIIKSPSNNSNIFSRMLQISPS-PNKFSTISSSSLNSSSNNFLIPNHSPPHP-DHNL
        SA  +D H H  D  NN +NAFFN  I++SS TT  DH+    L+IKSPS NSNIFSRMLQISPS PNKFS ISS +  S SN+FLIPNHS   P   + 
Subjt:  SASSLDLHQHQLDNTNNVNNAFFNGGITTSSATTQEDHE----LIIKSPSNNSNIFSRMLQISPS-PNKFSTISSSSLNSSSNNFLIPNHSPPHP-DHNL

Query:  HHFLHHNHDNNP--SASAALHISSPRNPPGIKRR
        HHFLHHN DNNP  SASAALHISSPRNPP IKRR
Subjt:  HHFLHHNHDNNP--SASAALHISSPRNPPGIKRR

TrEMBL top hitse value%identityAlignment
A0A0A0KKY7 WRKY domain-containing protein1.1e-4454.55Show/hide
Query:  MDNYEE-GDLTDIVRGGRS------------RSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD--HHQYNFGDPFCSSAAASASSL
        M+NYEE GDLTDIVRG  S             + SS+SNCKTE L D   +D+  +Y     +SS SQ    L LQD  HHQYNFGDPFCS  A S    
Subjt:  MDNYEE-GDLTDIVRGGRS------------RSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD--HHQYNFGDPFCSSAAASASSL

Query:  DLHQHQ----LDNTNNVNNAFFNGGITTSSATT-------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP-----
         LHQH     +DN+ N+ NAFFNG   +S+ TT        EDH  ++KS   NSN+FSRMLQISPSPNKF TISS + NS   +NFLI NHSP      
Subjt:  DLHQHQ----LDNTNNVNNAFFNGGITTSSATT-------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP-----

Query:  -HPDHNLHHFLH---HNHDNNPSASAALHISSPRNPPGIKRR
         HPDH+LHHFLH   HN++NN + S+ALHISSPRNPPGIKRR
Subjt:  -HPDHNLHHFLH---HNHDNNPSASAALHISSPRNPPGIKRR

A0A1S3AZL1 probable WRKY transcription factor 353.8e-4553.54Show/hide
Query:  MLLLFEMDNYEE--GDLTDIVRG-----------GRSRSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD------HHQYNFGDPFC
        MLLLFEM+NY++  GDLTDIVRG             + + SS+SNCKTE L D   +D+  +Y     +SS SQ    L LQD      HHQY+FGDPFC
Subjt:  MLLLFEMDNYEE--GDLTDIVRG-----------GRSRSRSSTSNCKTE-LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQD------HHQYNFGDPFC

Query:  SSAAASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT--------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLI
        S  A S     LHQH     +DN  N+ NAFFN GI+ S+ATT         EDH  ++KS   NSN+FSRMLQISPS NKF TISS + NS   +NFLI
Subjt:  SSAAASASSLDLHQHQ----LDNTNNVNNAFFNGGITTSSATT--------QEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNS-SSNNFLI

Query:  PNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR
         NHSP       HPDH+LHHFLHH    N++NN + SAALHISSPRNPPGIKRR
Subjt:  PNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR

A0A5A7UBC1 Putative WRKY transcription factor 355.3e-1567.47Show/hide
Query:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR
        MLQISPS NKF TISS + NS   +NFLI NHSP       HPDH+LHHFLHH    N++NN + SAALHISSPRNPPGIKRR
Subjt:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR

A0A5D3CPQ3 Putative WRKY transcription factor 355.3e-1567.47Show/hide
Query:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR
        MLQISPS NKF TISS + NS   +NFLI NHSP       HPDH+LHHFLHH    N++NN + SAALHISSPRNPPGIKRR
Subjt:  MLQISPSPNKFSTISSSSLNS-SSNNFLIPNHSPP------HPDHNLHHFLHH----NHDNNPSASAALHISSPRNPPGIKRR

A0A6J1CXU5 probable WRKY transcription factor 143.3e-1742.22Show/hide
Query:  MDNYEEGDLTDIVRGGRSRSRSSTSNCKTE--LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQDHHQYNFGDPFCSSAAASASSLDLHQHQLD------
        M+NY +GDLTDIVRG    S S+T  CK E   G    E     +  H   S+  Q   Q   Q H   +FGDPFC++A       D   H+LD      
Subjt:  MDNYEEGDLTDIVRGGRSRSRSSTSNCKTE--LGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQDHHQYNFGDPFCSSAAASASSLDLHQHQLD------

Query:  -----NTNNVNNAFFNGGITTSSATTQEDHELIIKSP---SNNSNIFSRMLQISPSPNKF--STISSSSL--NSSSNNFLIPNHSPPHPDHNLHHFLHHN
             + ++    FFNGG          DH L+IK+P   SNN+NIFSRMLQISPS NKF  S+  SS L  NS+S+  LI  +S        HHFL   
Subjt:  -----NTNNVNNAFFNGGITTSSATTQEDHELIIKSP---SNNSNIFSRMLQISPSPNKF--STISSSSL--NSSSNNFLIPNHSPPHPDHNLHHFLHHN

Query:  HDNNPSASAALHISSPRNPPGIKRR
         DN      A+ ISSPRNP GIKRR
Subjt:  HDNNPSASAALHISSPRNPPGIKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTGTTGTTTGAGATGGATAATTATGAAGAAGGTGATTTGACTGATATTGTGAGAGGAGGAAGATCAAGATCAAGAAGCTCCACTTCCAATTGCAAGACAGAATT
AGGTGATCAAGAAGAAGAAGATAATAATTATTATTATAATCCTCATGATCAGTGGAGTAGCTGCTCCCAATTTTCATCACAACTTCTACTACAAGATCATCATCAATACA
ATTTTGGGGATCCATTTTGTAGTAGTGCTGCTGCTTCTGCTTCTTCACTTGATCTTCATCAACATCAGTTGGATAATACTAATAATGTTAATAATGCTTTCTTCAATGGA
GGAATTACTACTTCTTCTGCTACTACTCAAGAAGATCATGAGCTTATTATCAAAAGCCCTTCTAATAATTCCAATATTTTCTCACGTATGCTTCAGATCTCTCCTTCACC
CAACAAATTCTCAACCATTTCTTCTTCTTCACTTAATTCCTCTTCTAATAATTTCCTAATTCCCAATCATTCCCCTCCACATCCTGATCATAATCTTCATCATTTTCTTC
ATCATAATCATGATAATAATCCCTCCGCCTCCGCTGCCCTTCACATCTCTTCTCCTCGGAATCCGCCCGGTATCAAGCGAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTGTTGTTTGAGATGGATAATTATGAAGAAGGTGATTTGACTGATATTGTGAGAGGAGGAAGATCAAGATCAAGAAGCTCCACTTCCAATTGCAAGACAGAATT
AGGTGATCAAGAAGAAGAAGATAATAATTATTATTATAATCCTCATGATCAGTGGAGTAGCTGCTCCCAATTTTCATCACAACTTCTACTACAAGATCATCATCAATACA
ATTTTGGGGATCCATTTTGTAGTAGTGCTGCTGCTTCTGCTTCTTCACTTGATCTTCATCAACATCAGTTGGATAATACTAATAATGTTAATAATGCTTTCTTCAATGGA
GGAATTACTACTTCTTCTGCTACTACTCAAGAAGATCATGAGCTTATTATCAAAAGCCCTTCTAATAATTCCAATATTTTCTCACGTATGCTTCAGATCTCTCCTTCACC
CAACAAATTCTCAACCATTTCTTCTTCTTCACTTAATTCCTCTTCTAATAATTTCCTAATTCCCAATCATTCCCCTCCACATCCTGATCATAATCTTCATCATTTTCTTC
ATCATAATCATGATAATAATCCCTCCGCCTCCGCTGCCCTTCACATCTCTTCTCCTCGGAATCCGCCCGGTATCAAGCGAAGGTAA
Protein sequenceShow/hide protein sequence
MLLLFEMDNYEEGDLTDIVRGGRSRSRSSTSNCKTELGDQEEEDNNYYYNPHDQWSSCSQFSSQLLLQDHHQYNFGDPFCSSAAASASSLDLHQHQLDNTNNVNNAFFNG
GITTSSATTQEDHELIIKSPSNNSNIFSRMLQISPSPNKFSTISSSSLNSSSNNFLIPNHSPPHPDHNLHHFLHHNHDNNPSASAALHISSPRNPPGIKRR