CuGenDBv2

Gene ID	Lsi01G000770
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Dynamin GTPase
Genome location	chr01:757074..761768
RNA-Seq Expression	Lsi01G000770
Synteny	Lsi01G000770
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0016020 - membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0008017 - microtubule binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138823.1 dynamin-2A isoform X1 [Cucumis sativus]

9.0e-05

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

XP_008441188.1 PREDICTED: dynamin-2A-like [Cucumis melo]

9.0e-05

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

XP_022152464.1 dynamin-2A-like [Momordica charantia]

3.4e-04

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EY E NDAILL IVPASQA   ASTRALRLAK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

XP_031736909.1 dynamin-2A isoform X2 [Cucumis sativus]

6.3e-06

60.32

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Query:  MEITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        MEI+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  MEITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

XP_038885141.1 dynamin-2A-like [Benincasa hispida]

2.4e-05

62.3

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  ASTRALRLAK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSU4 Dynamin GTPase

4.4e-05

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

A0A1S3B2U6 Dynamin GTPase

4.4e-05

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

A0A2C9WI23 Dynamin GTPase

2.2e-04

54.24

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD-ASQKKKT
        ++EYGE NDAILL I+PA+QA   AS+RALR+AK+YDGE       +  +D A+  KKT
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD-ASQKKKT

A0A5D3C5J6 Dynamin GTPase

4.4e-05

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EYGE NDAILL IVPASQAA  +STRALR+AK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

A0A6J1DG31 Dynamin GTPase

1.7e-04

59.02

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA
        I+EY E NDAILL IVPASQA   ASTRALRLAK+YDGE       +  +D  AS +K  A
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD--ASQKKKTA

SwissProt top hits

e value

%identity

Alignment

Q9SE83 Dynamin-2A

3.6e-04

40.26

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVDASQKKKTATGEEEPKEAVSKGEGIPK
        I EY + NDAILL IVPASQA+  +S+RAL++AK+YD E       +  +D + +   A       +A+   +G PK
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVDASQKKKTATGEEEPKEAVSKGEGIPK

Arabidopsis top hits

e value

%identity

Alignment

AT1G10290.1 dynamin-like protein 6

2.5e-05

40.26

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVDASQKKKTATGEEEPKEAVSKGEGIPK
        I EY + NDAILL IVPASQA+  +S+RAL++AK+YD E       +  +D + +   A       +A+   +G PK
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVDASQKKKTATGEEEPKEAVSKGEGIPK

AT1G59610.1 dynamin-like 3

2.1e-04

38.46

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Query:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD-ASQKKKTATGEEEPKEAVSKGEGIPK
        I E+ + NDAILL +VPASQA+  +S+RAL++AK+YD E       +  +D A++  K+        +A+   +G PK
Subjt:  ITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVD-ASQKKKTATGEEEPKEAVSKGEGIPK

Sequences

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CDS sequence

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ATGGAGATTACTGAATATGGTGAGCAGAATGATGCCATTTTGCTAGACATTGTGCCTGCCTCTCAAGCAGCTATAAATGCTTCAACTCGTGCACTCAGACTCGCAAAGGA
TTATGATGGTGAAGAACGTAATAGAGAAACAACTATGATGGTCGTGGATGCATCTCAGAAGAAGAAAACTGCGACGGGGGAGGAGGAGCCCAAGGAAGCGGTATCGAAAG
GAGAAGGGATACCCAAACTGGAGGTGAAGGAGGGTAGTGACGCCAAGAAGTTTAAGCAATTAAAAATGTCAATTTTTTCAAAGGAGAGCCCCGATGCCCGCTTGTCTTTT
CACTTTTTACTTCACGATAAAGGAAAATCTCTCAAAGATCAATCACAAAAGGCTCAACAGGCTGTTTTGCAGGTAGGCAATCAGAGTTTGTGGGTACTATCCCCATTACC
GCAAAACAAAAAAAACAAGATAAAATCAAATCAAATCAAATCCCTCGATAATCAGCATGAACAGTGCCCAGCATCGCATCCAACAATACAGCCACATGAAACGACCGTAC
CACCAGGGTTTTGGATGGCCGCCAATACTGCGGCGTGCAACGGTGTTGGCAGCATATGCGATAGCACGTGTCGAGCAAAATCGGGAAGCGCGGCAGCGGCGGCAGGCACG
GCAAGTGCTGCGGCGACGGTAGCAGCAGGCGCTGGAAGCGCGGCGGCGACAGCAGGAACCGGAAGCGCGGCGGAGGCAGCAGGCCCTGTAGTGGCTGGCTGTGCTATTAC
AGCGGTGGACATTGATGATAAACCTAGCGGACGAAGAAATCGGAGGAAGAAACCGGAGGAAGAAACCGAGGGGACGAGAAAGAAAGTGAGAGGATGGAGAGCAACTAGAC
TAACTGCATTGCCTTCAAATTTACCAACAATGCCCACGATCACGATCATAAAGCCAGTGACGTCCATACCTTGA

mRNA sequence

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Protein sequence

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MEITEYGEQNDAILLDIVPASQAAINASTRALRLAKDYDGEERNRETTMMVVDASQKKKTATGEEEPKEAVSKGEGIPKLEVKEGSDAKKFKQLKMSIFSKESPDARLSF
HFLLHDKGKSLKDQSQKAQQAVLQVGNQSLWVLSPLPQNKKNKIKSNQIKSLDNQHEQCPASHPTIQPHETTVPPGFWMAANTAACNGVGSICDSTCRAKSGSAAAAAGT
ASAAATVAAGAGSAAATAGTGSAAEAAGPVVAGCAITAVDIDDKPSGRRNRRKKPEEETEGTRKKVRGWRATRLTALPSNLPTMPTITIIKPVTSIP

Lsi01G000770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome