; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G000870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA-damage-repair/toleration protein DRT111, chloroplastic-like
Genome locationchr01:847907..848924
RNA-Seq ExpressionLsi01G000870
SyntenyLsi01G000870
Gene Ontology termsGO:0043484 - regulation of RNA splicing (biological process)
GO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR040052 - Splicing factor 45


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594427.1 DNA-damage-repair/toleration protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-13195.27Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K ATSTHPKASV APVEPSQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAE RKELERRRQEEEEREKKEREERERE+SDSR+NISGEEAWRRRAAKSGA+PRSPSPPST DGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

XP_004134609.1 DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis sativus]4.8e-13397.09Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPK SV   VE SQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE+SDSRINISGEEAWRRRAAKSGAIPRSPSPPS+VDGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

XP_008439555.1 PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis melo]1.5e-13196Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQ+KIKAAT THPKASV   VE SQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKER+ERERE+SDSRINISGEEAWRRRAAKSGAIPRSPSPPS+VDGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKK KSVNFNGLPTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

XP_023003194.1 DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxima]6.2e-13396.36Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K ATSTHPKASV APVEPSQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSR+NISGEEAWRRRAAKSGAIPRSPSPPST DGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

XP_038882071.1 DNA-damage-repair/toleration protein DRT111, chloroplastic [Benincasa hispida]3.0e-13598.18Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASV APVEPSQPILAE I QPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS+VDGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

TrEMBL top hitse value%identityAlignment
A0A0A0KP45 Uncharacterized protein2.3e-13397.09Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPK SV   VE SQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE+SDSRINISGEEAWRRRAAKSGAIPRSPSPPS+VDGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

A0A1S3AYL8 DNA-damage-repair/toleration protein DRT111, chloroplastic7.4e-13296Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQ+KIKAAT THPKASV   VE SQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKER+ERERE+SDSRINISGEEAWRRRAAKSGAIPRSPSPPS+VDGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKK KSVNFNGLPTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

A0A6J1D044 DNA-damage-repair/toleration protein DRT111, chloroplastic2.8e-13194.91Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSK+KAATSTHPKAS  A VE SQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYR+EKKRKAMEAEMRKELERRRQEEEEREKKEREERER+YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS  DGF+IGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNG PTRVLLLRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

A0A6J1ELY8 DNA-damage-repair/toleration protein DRT111, chloroplastic-like4.1e-13094.91Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K ATSTHPKAS    VEPSQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSR+NISGEEAWRRRAAKSGA+PRSPSPPST DGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

A0A6J1KSL4 DNA-damage-repair/toleration protein DRT111, chloroplastic-like3.0e-13396.36Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD
        MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K ATSTHPKASV APVEPSQPILAEAITQPALVAVTSTV EEYD
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYD

Query:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG
        PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSR+NISGEEAWRRRAAKSGAIPRSPSPPST DGFSIGKSETGGLGVGAG
Subjt:  PARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAG

Query:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV
        GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMV
Subjt:  GQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMV

SwissProt top hitse value%identityAlignment
P42698 DNA-damage-repair/toleration protein DRT111, chloroplastic1.2e-8666.55Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATS--------THPKASVLAPVEPSQPILAEAITQPALVAVT
        MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K K   S        ++   SVL P   S P       QPALV VT
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATS--------THPKASVLAPVEPSQPILAEAITQPALVAVT

Query:  STVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE-----YSDSRINISGEEAWRRRAAK----SGAIPRSPSPPSTVD
        S+V EEYDPARPNDYEEY+ EKKRKA EAEM++E+++RRQE+EER+K+EREERE+E        SR+NISGEEAW+RRAA     SG   RS SPP  VD
Subjt:  STVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE-----YSDSRINISGEEAWRRRAAK----SGAIPRSPSPPSTVD

Query:  GFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGLPTRVLLLRNMV
        GFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K VKSVN NG PTRVLLLRNMV
Subjt:  GFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGLPTRVLLLRNMV

Q8JZX4 Splicing factor 452.1e-0632.4Show/hide
Query:  KPSSVFAPQTVLR----SQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQ-E
        K S+V AP   L+    S  +  A T  H  A +  PV PS     E         V   + +EYDP  PNDYE+     KR+  E + ++ELER+++ E
Subjt:  KPSSVFAPQTVLR----SQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQ-E

Query:  EEEREKKEREE----REREYSDSRINISGEEAWRRRAAKSGAI------------------------PRSPS-----PPSTVDGFSIGKSETG---GLGV
        E E+ +K+R E      R   DS  +   E   R+R+    AI                        PRS S     PP   +     +S TG       
Subjt:  EEEREKKEREE----REREYSDSRINISGEEAWRRRAAKSGAI------------------------PRSPS-----PPSTVDGFSIGKSETG---GLGV

Query:  GAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDT---KSEKKVKSVNFNGL------PTRVLLLRNMV
          GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T   +++   K  + N L      PT+V+LLRNMV
Subjt:  GAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDT---KSEKKVKSVNFNGL------PTRVLLLRNMV

Q96I25 Splicing factor 452.1e-0629.14Show/hide
Query:  LYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA--------PQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQP-----ALVAV
        LY DL       E   + +  WS + K+    L+   +             TVL     +K   S+  +  V  P     P +A  +  P     +   V
Subjt:  LYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA--------PQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQP-----ALVAV

Query:  TSTVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----REREYSDSRINISGEEAWRRRAAKSGAI--------------
           + +EYDP  PNDYE+     KR+  E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+    AI              
Subjt:  TSTVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----REREYSDSRINISGEEAWRRRAAKSGAI--------------

Query:  ----------PRSPS-----PPSTVDGFSIGKSETG---GLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEK
                  PRS S     PP   +     +S TG         GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ + 
Subjt:  ----------PRSPS-----PPSTVDGFSIGKSETG---GLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEK

Query:  KVKS-----VNFNGLPTRVLLLRNMV
          KS           PT+V+LLRNMV
Subjt:  KVKS-----VNFNGLPTRVLLLRNMV

Arabidopsis top hitse value%identityAlignment
AT1G30480.1 D111/G-patch domain-containing protein8.5e-8866.55Show/hide
Query:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATS--------THPKASVLAPVEPSQPILAEAITQPALVAVT
        MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K K   S        ++   SVL P   S P       QPALV VT
Subjt:  MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATS--------THPKASVLAPVEPSQPILAEAITQPALVAVT

Query:  STVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE-----YSDSRINISGEEAWRRRAAK----SGAIPRSPSPPSTVD
        S+V EEYDPARPNDYEEY+ EKKRKA EAEM++E+++RRQE+EER+K+EREERE+E        SR+NISGEEAW+RRAA     SG   RS SPP  VD
Subjt:  STVTEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERE-----YSDSRINISGEEAWRRRAAK----SGAIPRSPSPPSTVD

Query:  GFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGLPTRVLLLRNMV
        GFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K VKSVN NG PTRVLLLRNMV
Subjt:  GFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGLPTRVLLLRNMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGTGGATTGTACGGGGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGACAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCACCACCGACTCT
TCGCAAGCCATCGTCCGTCTTCGCGCCACAGACTGTTCTTAGATCTCAAAGCAAAATAAAAGCCGCCACTTCGACGCACCCTAAGGCTTCGGTATTAGCGCCGGTGGAGC
CGTCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCTACGGTTACAGAAGAGTATGATCCAGCGAGGCCGAATGACTACGAGGAGTAT
AGGGTGGAGAAGAAGAGGAAGGCCATGGAGGCCGAGATGAGGAAGGAGCTCGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGGGAAAG
AGAATATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCACCATCTCCACCAAGTACCGTAGACG
GCTTCAGCATTGGAAAGTCGGAGACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCCAAGATGGGGTGGAAAGAGGGGCAAGGG
CTTGGGAAGCAAGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACAGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGACACGAAATCAGAGAAGAAAGTAAA
GAGTGTTAACTTCAACGGACTACCTACTCGTGTTCTTCTGCTCAGAAACATGGTACGGTTGGAGCAATCTGGACAGCTTTACCATAACCGATCATATCGTTTCCTCATCC
TTCAAGGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGTGGATTGTACGGGGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGACAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCACCACCGACTCT
TCGCAAGCCATCGTCCGTCTTCGCGCCACAGACTGTTCTTAGATCTCAAAGCAAAATAAAAGCCGCCACTTCGACGCACCCTAAGGCTTCGGTATTAGCGCCGGTGGAGC
CGTCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCTACGGTTACAGAAGAGTATGATCCAGCGAGGCCGAATGACTACGAGGAGTAT
AGGGTGGAGAAGAAGAGGAAGGCCATGGAGGCCGAGATGAGGAAGGAGCTCGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGGGAAAG
AGAATATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCACCATCTCCACCAAGTACCGTAGACG
GCTTCAGCATTGGAAAGTCGGAGACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCCAAGATGGGGTGGAAAGAGGGGCAAGGG
CTTGGGAAGCAAGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACAGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGACACGAAATCAGAGAAGAAAGTAAA
GAGTGTTAACTTCAACGGACTACCTACTCGTGTTCTTCTGCTCAGAAACATGGTACGGTTGGAGCAATCTGGACAGCTTTACCATAACCGATCATATCGTTTCCTCATCC
TTCAAGGAGTTTGA
Protein sequenceShow/hide protein sequence
MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKASVLAPVEPSQPILAEAITQPALVAVTSTVTEEYDPARPNDYEEY
RVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSTVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQG
LGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVRLEQSGQLYHNRSYRFLILQGV