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Lsi01G000940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G000940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter C family member 12-like
Genome locationchr01:961051..963801
RNA-Seq ExpressionLsi01G000940
SyntenyLsi01G000940
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658309.2 ABC transporter C family member 12 isoform X1 [Cucumis sativus]4.4e-2184.85Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  MII TVSFQVLFAVLLL YVPNLEPYPGYIAL SE VDNMDYEMLLG EHVCPERHA +FS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

XP_022977522.1 ABC transporter C family member 12-like [Cucurbita maxima]2.8e-2080.3Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPERHANLFS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

XP_038882166.1 ABC transporter C family member 12-like isoform X1 [Benincasa hispida]5.5e-2489.39Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PERH N+FS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

XP_038882169.1 ABC transporter C family member 12-like isoform X2 [Benincasa hispida]9.4e-2490.77Show/hide
Query:  ADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PERH N+FS
Subjt:  ADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

XP_038882170.1 ABC transporter C family member 12-like isoform X3 [Benincasa hispida]5.5e-2489.39Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD YMIIITVSFQVLFAVLLL YVPNLEPYPGYIALPSEYVDNMDYEMLLG EHV PERH N+FS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

TrEMBL top hitse value%identityAlignment
A0A0A0KI94 Uncharacterized protein2.1e-2184.85Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  MII TVSFQVLFAVLLL YVPNLEPYPGYIAL SE VDNMDYEMLLG EHVCPERHA +FS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

A0A6J1D047 LOW QUALITY PROTEIN: ABC transporter C family member 12-like4.0e-2083.61Show/hide
Query:  MIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        MII TVSFQVLFAVLLL YVPNLEPYPGY+ + SE +DNMDYEMLLG EHVCPERHAN+FS
Subjt:  MIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

A0A6J1ED72 ABC transporter C family member 12-like1.4e-2080.3Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPERHANLFS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

A0A6J1EDU0 ABC transporter C family member 12-like isoform X16.8e-2077.27Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  +II T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE LLG  HVCPERHAN+FS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

A0A6J1IIR6 ABC transporter C family member 12-like1.4e-2080.3Show/hide
Query:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        +AD  MII T SFQVLFAVLLL YVPNLEPYPGY+ + SEYVDNMDYE L G EHVCPERHANLFS
Subjt:  NADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 21.8e-0945.9Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF
        Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+F
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF

Q9C8G9 ABC transporter C family member 18.6e-1253.97Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS
        Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANLF S
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS

Q9C8H0 ABC transporter C family member 121.3e-1251.61Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        Y+ I +   Q LF +LLL+Y+P L+PYPGY  + +E +DN++Y+ L G EH+CPERHA++FS
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

Q9C8H1 ABC transporter C family member 111.2e-0846.77Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        Y+ I +   Q LF +LLLVY+P L+ YP Y  L +E +DN++Y+ L G  ++CPER+A++FS
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 16.1e-1353.97Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS
        Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANLF S
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS

AT1G30400.2 multidrug resistance-associated protein 16.1e-1353.97Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS
        Y+ I  V+ QV F  LL VY PNL+PYPGY  + +E  ++ +YE L G E++CPERHANLF S
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSS

AT1G30410.1 multidrug resistance-associated protein 139.4e-1451.61Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS
        Y+ I +   Q LF +LLL+Y+P L+PYPGY  + +E +DN++Y+ L G EH+CPERHA++FS
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFS

AT2G34660.1 multidrug resistance-associated protein 21.3e-1045.9Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF
        Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+F
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF

AT2G34660.2 multidrug resistance-associated protein 21.3e-1045.9Show/hide
Query:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF
        Y+    V  QVLF +LL +++PNL+ YPGY+ + SE VD+ +YE +   + +CPE+HAN+F
Subjt:  YMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCGGATTTCTATATGATCATCATCACAGTTTCTTTCCAGGTGTTATTTGCAGTACTTCTTCTTGTTTATGTCCCTAATTTGGAACCTTATCCTGGTTATATTGC
CTTGCCATCTGAGTATGTTGACAACATGGACTATGAAATGCTTCTTGGAGTAGAGCATGTTTGTCCCGAAAGGCATGCTAATTTATTTTCCAGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCGGATTTCTATATGATCATCATCACAGTTTCTTTCCAGGTGTTATTTGCAGTACTTCTTCTTGTTTATGTCCCTAATTTGGAACCTTATCCTGGTTATATTGC
CTTGCCATCTGAGTATGTTGACAACATGGACTATGAAATGCTTCTTGGAGTAGAGCATGTTTGTCCCGAAAGGCATGCTAATTTATTTTCCAGTAAGTAA
Protein sequenceShow/hide protein sequence
MNADFYMIIITVSFQVLFAVLLLVYVPNLEPYPGYIALPSEYVDNMDYEMLLGVEHVCPERHANLFSSK