; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPSI-K
Genome locationchr01:1082870..1085223
RNA-Seq ExpressionLsi01G001030
SyntenyLsi01G001030
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017493 - Photosystem I reaction centre subunit PsaK, chloroplastic
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic
IPR035982 - Photosystem I reaction centre subunit PsaK superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581462.1 ABC transporter C family member 12, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5892.03Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MAATMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGS
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGS
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGS

KAG7034753.1 Photosystem I reaction center subunit psaK, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5891.37Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MAATMMTSIPQF GLRPT+SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_022146631.1 photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia]1.1e-5891.37Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MA TMMTSIPQF+GL+PTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_023543618.1 photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo]1.8e-5891.37Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_038883621.1 photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]9.6e-6092.81Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MAATMMTSIPQFNGLRPTVS+APVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

TrEMBL top hitse value%identityAlignment
A0A1S3AZR1 PSI-K3.3e-5889.93Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLK IGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A5A7U9C9 PSI-K3.3e-5889.93Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLK IGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1CZY3 PSI-K5.1e-5991.37Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MA TMMTSIPQF+GL+PTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1EJV0 PSI-K4.3e-5890.65Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGG ALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDS
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1IQ95 PSI-K2.5e-5890.65Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNL         IMVISTSLMLFAGRFGLAPSANRKSTAGLKLE R+S
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDS

Query:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  GLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

SwissProt top hitse value%identityAlignment
P14225 Photosystem I reaction center subunit psaK, chloroplastic1.6e-1746.02Show/hide
Query:  AVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKL--EVRDSGLQTGDPAGFTLADTLACGSVGHIIG
        A++P +     ++  R   +IGS TNL         IMV ST+  L A RFGLAP+  + +TAGLKL      +G+ + DPAGFT+ D LA G+ GH +G
Subjt:  AVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKL--EVRDSGLQTGDPAGFTLADTLACGSVGHIIG

Query:  VGVVLGLKSIGSL
        VG+VLGLK IG+L
Subjt:  VGVVLGLKSIGSL

P36886 Photosystem I reaction center subunit psaK, chloroplastic9.1e-3765.67Show/hide
Query:  MTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTG
        MTS+PQF+GLR   + +  RS+  +  LRRR    +  RC DYIGS TNL         IMV +T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTG
Subjt:  MTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTG

Query:  DPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        DPAGFTLADTLACG+VGHI+GVG+VLGLK+ G L
Subjt:  DPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

P42051 Photosystem I reaction center subunit psaK, chloroplastic (Fragment)2.0e-0775.61Show/hide
Query:  DYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANR
        DYIGSPTN+         IMVISTSLMLFAGRFGLAPSANR
Subjt:  DYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANR

Q9SUI5 Photosystem I reaction center subunit psaK, chloroplastic1.8e-4873.57Show/hide
Query:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD
        MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNL         IMV ST+LMLFAGRFGLAPSANRK+TAGL+LE RD
Subjt:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD

Query:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        SGLQTGDPAGFTLADTLACG+VGHIIGVGVVLGLK+IG++
Subjt:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

Q9ZT05 Photosystem I reaction center subunit psaK, chloroplastic1.5e-4470.07Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD
        MA +MMT++PQF GLRP +  +P++ LVA QP+ RR+G GAL  RC D+IGS TN+         IMV ST+LMLFAGRFGLAPSANRK+TAGLKLE RD
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD

Query:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSI
        SGLQTGDPAGFTLADTLACG+VGHIIGVGVVLGL+++
Subjt:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSI

Arabidopsis top hitse value%identityAlignment
AT1G30380.1 photosystem I subunit K1.3e-4973.57Show/hide
Query:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD
        MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNL         IMV ST+LMLFAGRFGLAPSANRK+TAGL+LE RD
Subjt:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRD

Query:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        SGLQTGDPAGFTLADTLACG+VGHIIGVGVVLGLK+IG++
Subjt:  SGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGG
CGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACCAACTTGAAATTGAGGATGAAATATAGGAGTAAAATAATGGTGATATCGACAAGCCTGATGC
TGTTCGCCGGACGGTTCGGATTGGCTCCATCTGCAAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGTGAGGGACTCTGGATTACAGACGGGTGACCCAGCGGGTTTC
ACCCTCGCTGATACTTTGGCATGTGGCAGTGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA
mRNA sequenceShow/hide mRNA sequence
CGAAAATATGTTTGGTTTTTACTCTTTTCACATGTGAAAAGTAACTTCTGCCCTTAATTGGTATGGTCTTCCTCACATTCCTAAATATTTACCAGCATAGATTTTCAAAC
ATAAAAAGTTGAGTTTCGAAATATAGCCTATTTTAAAAACTATTGAACTGTGACCCCAATCTTTTAGGAGGGACCCGCCATTCAGTAGTTTATTCCATATTTATCCCATG
AAGACTCGGTATTCCGTGGTTTTGTAAAAATATCTACAAATAAATTCGTTAGCGATTTGATTTACTTTATCTATCCAAGTTTAGTAGGGGTATATCTGTCAATCTAATCG
CCATTTTTGCAAGAAAAAGAAATTCAATGGACTCTTTTTCAAAAACGTCTTCCAGTCGCTCTAGTTTCAAATCTGTGTGAGCCCAGTCGGCACATGTTCATTGGGCTTAA
GAATAGGGATCCAGAACCAATCAGCCAAGCCTGGCCCACAGGCCTCTAACCCAAAACCTTATCCGTTGAGAGAAATCCAATAAAACAAAGCCACGTAAGCAACCAGGATC
TAAAACTGTATCCAAATCCACCAATCTGAGGCCACAAATTTAGCACCTGTGGCTGAGTGGATGTCGAATTACAAGAATCTCTCAATCTCTTCCTCTTAAATCCATTTATC
CTTCGAATAAACAAACACAAGAAAGAAGGGAGAAATTTTTTTTGTCGTAATTAGCAGCAAGAAAATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCA
GGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCT
ACCAACTTGAAATTGAGGATGAAATATAGGAGTAAAATAATGGTGATATCGACAAGCCTGATGCTGTTCGCCGGACGGTTCGGATTGGCTCCATCTGCAAACAGGAAATC
AACGGCGGGGCTGAAGCTGGAGGTGAGGGACTCTGGATTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACTTTGGCATGTGGCAGTGTCGGCCACATCATTG
GCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAAAAATTCTCCTTTTTTTTTTTTTTTTTA
Protein sequenceShow/hide protein sequence
MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLKLRMKYRSKIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGF
TLADTLACGSVGHIIGVGVVLGLKSIGSL