; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein SKIP19-like
Genome locationchr01:1097576..1100474
RNA-Seq ExpressionLsi01G001060
SyntenyLsi01G001060
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]2.0e-15888.18Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI INIEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSN+L +LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYE+STEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYTDLYFY
        GS+FSDYTDLYFY
Subjt:  GSNFSDYTDLYFY

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-15688.67Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI INIEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSNQL +LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYTD
        GS+FSDYTD
Subjt:  GSNFSDYTD

XP_022925897.1 F-box protein SKIP19-like isoform X1 [Cucurbita moschata]3.5e-15888.5Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI I IEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSNQL  LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYTDLYFY
        GS+FSDYTDLYFY
Subjt:  GSNFSDYTDLYFY

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]4.8e-16089.14Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI INIEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLLHYITQSSNQL +LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYTDLYFY
        GS+FSDYTDLYFY
Subjt:  GSNFSDYTDLYFY

XP_038883784.1 F-box protein SKIP19-like [Benincasa hispida]1.3e-16893.87Show/hide
Query:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT
        ESNSNPNSVEEESRNWLELPADV S+ILHKLGP+DIL NAQDVCSSWRKICEDPLMWRVIDMRYSGD WDMDYDLEE+CRQAV RSCGQL+ INIEHFGT
Subjt:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT

Query:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF
        DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVS+LPLLEDLELSFC FDVETL TLGQSCP LKSLKLNRQFYRRVECD+GALAIAENMPNLRHLQIF
Subjt:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF

Query:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN
        GNSLTN GLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLR+PHDPTDDYEFSTEIID+DDDYDDDYGYPFGLSDT+LLTDDDDYYEFSGGS+
Subjt:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN

Query:  FSDYTDLYFY
        FSDYTDLYFY
Subjt:  FSDYTDLYFY

TrEMBL top hitse value%identityAlignment
A0A1S3AZQ4 F-box protein SKIP19-like isoform X11.3e-15588.39Show/hide
Query:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT
        ESNSNPNSVE ESRNWLELP DVTS+IL KLGP++IL  AQ VCSSWRKICEDPLMWRVIDMRY  D WDMDYDLEEMCRQAV+RSCG+LI INIEHFGT
Subjt:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT

Query:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF
        DDLL YITQS NQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFC F+VETL TLGQ+CP LKSLKLNRQFYRRVECD+GALAIA+NMPNLRHL IF
Subjt:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF

Query:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN
        GN+LTNRGLEAIL GC ALESLDLRQCFNLNLAGQLG KCS KIKDLRLPHDPTDD EF+TEIID DD+YDDDY YPFGLSDTDLLTDDDDYYEFSGGS+
Subjt:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN

Query:  FSDYTDLYFY
        FSDYTDLYFY
Subjt:  FSDYTDLYFY

A0A5A7UDI0 F-box protein SKIP19-like isoform X11.3e-15588.39Show/hide
Query:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT
        ESNSNPNSVE ESRNWLELP DVTS+IL KLGP++IL  AQ VCSSWRKICEDPLMWRVIDMRY  D WDMDYDLEEMCRQAV+RSCG+LI INIEHFGT
Subjt:  ESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGT

Query:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF
        DDLL YITQS NQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFC F+VETL TLGQ+CP LKSLKLNRQFYRRVECD+GALAIA+NMPNLRHL IF
Subjt:  DDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIF

Query:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN
        GN+LTNRGLEAIL GC ALESLDLRQCFNLNLAGQLG KCS KIKDLRLPHDPTDD EF+TEIID DD+YDDDY YPFGLSDTDLLTDDDDYYEFSGGS+
Subjt:  GNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSN

Query:  FSDYTDLYFY
        FSDYTDLYFY
Subjt:  FSDYTDLYFY

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.7e-15888.5Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI I IEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSNQL  LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYTDLYFY
        GS+FSDYTDLYFY
Subjt:  GSNFSDYTDLYFY

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.7e-15588.31Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI I IEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSNQL  LRLVYCNRISDEGLI+AVSKLPLLEDLE+SF  FDVETLETLGQ  P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYT
        GS+FSDYT
Subjt:  GSNFSDYT

A0A6J1ILH5 F-box protein SKIP19-like2.3e-15587.99Show/hide
Query:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH
        MA ESNS+PNS+ EE+RNWLELPADVTS+IL KLGP+DIL NAQDVCSSWRKICEDPLMWRV+DMRYSGD WDMDYDLEEMCRQAV+RSCGQLI INIEH
Subjt:  MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEH

Query:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL
        FGTDDLL YITQSSNQL +LRLVYCNRISDEG I+AVSKLPLLEDLE+SF  FDVETLETLG   P LKSLKLNRQFYRRVECD+GALAIAENMPNLRHL
Subjt:  FGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG
        QIFGNSLTNRGLEAILDGCP LESLDLRQCFNLNLAGQLG KCS KIK+LRLPHDPTDDYEFSTEI+++ DDY++DYGYPFGLSDTDLLTDDDDYYEFSG
Subjt:  QIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSG

Query:  GSNFSDYT
        GS+FSDYT
Subjt:  GSNFSDYT

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.5e-6346.67Show/hide
Query:  MATESNSNPNSV--------EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQ
        M T S+S P +         EE+  NW ELP D+ S IL +L P++IL NA+ VC SWR++ +DPL+WR IDMR +  R    Y +E  CR  V+ S G 
Subjt:  MATESNSNPNSV--------EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQ

Query:  LISINIE--HFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAI
        L+  NI+   F T  LL+Y+ + S+ L RLR V   +I+  G+ EA+ KLPLLE+LEL +C  + E  +T+GQ+CP+LK+LKL   +    E D  ALAI
Subjt:  LISINIE--HFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAI

Query:  AENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYE---FSTEIIDHDDDYDDDYGYPFGLSDTD
        A+ MP L HLQ+  N LTN GL AILDGCP LE LDLRQCFN+NL G L  +C  +IKD R P+D  DDY    FS      D+  +++  Y +G  DT+
Subjt:  AENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYE---FSTEIIDHDDDYDDDYGYPFGLSDTD

Q9M0U7 Putative F-box protein At4g054753.1e-6146.07Show/hide
Query:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ
        +EE  NW++LP ++T+ IL +L   DIL NA+ +C +WR+IC+DP MWR I++R   D    ++D E MCR  V+ S G L+ INIEHF +D LL YI  
Subjt:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ

Query:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR------------QFYRRVECDRGALAIAENMPNLRHL
         S  L  L +     ++++G++  + KLPLLE L +      ++ L+ +G +CP LK+LKLN              +   +ECD  ALAIAE+MP LRHL
Subjt:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR------------QFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALES-LDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEI
        Q+ GN LTN GL AILDGCP LE  LD+R+CFN+NL G L  +C  +IK+LR PHD T DY +S  +
Subjt:  QIFGNSLTNRGLEAILDGCPALES-LDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEI

Q9M0U8 Putative F-box/LRR-repeat protein 212.6e-5544.09Show/hide
Query:  TESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINI-EHF
        T S +  + + +E RNW++LP ++T+ IL +L   DIL NAQ VC  WR+IC+DP MWR I+ R   D    ++D   MCR  V+ S G L+ IN+ EHF
Subjt:  TESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINI-EHF

Query:  GTDDLLHYITQSSNQLSRLRLVYC-NRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR----------------QFYRRVECD
         +D LL YIT     L  L L  C  R++  G++ A++K+PLLE LE++     ++ L+ +G +CP LK+LKLN                      +ECD
Subjt:  GTDDLLHYITQSSNQLSRLRLVYC-NRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR----------------QFYRRVECD

Query:  RGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFS
          ALAIAE+MP L HLQ+  N LTN GL AILDGCP LE LD+R+CF ++L G L  +C   IK+LR P D T DY ++
Subjt:  RGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFS

Q9M0U9 F-box protein SKIP191.4e-8053.04Show/hide
Query:  SNSNPNSVEE--ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFG
        S+S+P +  E  ES NW ELP ++TS ILH+LG I+IL NAQ VC SWR++C+DP MWR IDM   GD  DMDY+LE MCR AV+RS G L+ I I +FG
Subjt:  SNSNPNSVEE--ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFG

Query:  TDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQI
        T DLL+YI   S+ L  LRL+ C++I+D+G +EAV KLP LE+LELS+C F VE+L  +GQ C ++K+LKLN+  + + E D  ALAIAE MP LRHLQ+
Subjt:  TDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQI

Query:  FGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDD---YYEFS
         GN L++ GL AILD C  LE LDLR+CFN+NL G L  +C   +K +R P+D   D       ID     D+D   P+  SD DL++ DDD   YY+FS
Subjt:  FGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDD---YYEFS

Query:  GGSNFSDYTDLYF
        G S+FSDY    F
Subjt:  GGSNFSDYTDLYF

Q9S9V9 Putative F-box/LRR-repeat protein 232.9e-7556.4Show/hide
Query:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ
        +++ RNW ELP+ +TS IL +LG I+IL NAQ VC  W ++C+DP MWR ID+    DR    YDLE MCR AV+RS G LI I I ++GT+DL+ YI  
Subjt:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ

Query:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQ---FYRRVECDRGALAIAENMPNLRHLQIFGNSLTN
         S+ L  L LV C  I+DEG+ +AVSK+PLLE LE+S+CLF  E+L  +G+SCP+LK+LKLNR     +     D  A AIAE+MP LRHLQ+ GN LTN
Subjt:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQ---FYRRVECDRGALAIAENMPNLRHLQIFGNSLTN

Query:  RGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDD
        +GL AILDGCP LE LDLRQCFN+NL G L  +C  +IKDLR P+D  DD
Subjt:  RGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein9.6e-8253.04Show/hide
Query:  SNSNPNSVEE--ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFG
        S+S+P +  E  ES NW ELP ++TS ILH+LG I+IL NAQ VC SWR++C+DP MWR IDM   GD  DMDY+LE MCR AV+RS G L+ I I +FG
Subjt:  SNSNPNSVEE--ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFG

Query:  TDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQI
        T DLL+YI   S+ L  LRL+ C++I+D+G +EAV KLP LE+LELS+C F VE+L  +GQ C ++K+LKLN+  + + E D  ALAIAE MP LRHLQ+
Subjt:  TDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQI

Query:  FGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDD---YYEFS
         GN L++ GL AILD C  LE LDLR+CFN+NL G L  +C   +K +R P+D   D       ID     D+D   P+  SD DL++ DDD   YY+FS
Subjt:  FGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDD---YYEFS

Query:  GGSNFSDYTDLYF
        G S+FSDY    F
Subjt:  GGSNFSDYTDLYF

AT4G05470.1 RNI-like superfamily protein1.8e-5644.09Show/hide
Query:  TESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINI-EHF
        T S +  + + +E RNW++LP ++T+ IL +L   DIL NAQ VC  WR+IC+DP MWR I+ R   D    ++D   MCR  V+ S G L+ IN+ EHF
Subjt:  TESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINI-EHF

Query:  GTDDLLHYITQSSNQLSRLRLVYC-NRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR----------------QFYRRVECD
         +D LL YIT     L  L L  C  R++  G++ A++K+PLLE LE++     ++ L+ +G +CP LK+LKLN                      +ECD
Subjt:  GTDDLLHYITQSSNQLSRLRLVYC-NRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR----------------QFYRRVECD

Query:  RGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFS
          ALAIAE+MP L HLQ+  N LTN GL AILDGCP LE LD+R+CF ++L G L  +C   IK+LR P D T DY ++
Subjt:  RGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFS

AT4G05475.1 RNI-like superfamily protein2.2e-6246.07Show/hide
Query:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ
        +EE  NW++LP ++T+ IL +L   DIL NA+ +C +WR+IC+DP MWR I++R   D    ++D E MCR  V+ S G L+ INIEHF +D LL YI  
Subjt:  EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYITQ

Query:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR------------QFYRRVECDRGALAIAENMPNLRHL
         S  L  L +     ++++G++  + KLPLLE L +      ++ L+ +G +CP LK+LKLN              +   +ECD  ALAIAE+MP LRHL
Subjt:  SSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNR------------QFYRRVECDRGALAIAENMPNLRHL

Query:  QIFGNSLTNRGLEAILDGCPALES-LDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEI
        Q+ GN LTN GL AILDGCP LE  LD+R+CFN+NL G L  +C  +IK+LR PHD T DY +S  +
Subjt:  QIFGNSLTNRGLEAILDGCPALES-LDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEI

AT4G05490.1 RNI-like superfamily protein1.1e-6446.67Show/hide
Query:  MATESNSNPNSV--------EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQ
        M T S+S P +         EE+  NW ELP D+ S IL +L P++IL NA+ VC SWR++ +DPL+WR IDMR +  R    Y +E  CR  V+ S G 
Subjt:  MATESNSNPNSV--------EEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQ

Query:  LISINIE--HFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAI
        L+  NI+   F T  LL+Y+ + S+ L RLR V   +I+  G+ EA+ KLPLLE+LEL +C  + E  +T+GQ+CP+LK+LKL   +    E D  ALAI
Subjt:  LISINIE--HFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAI

Query:  AENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYE---FSTEIIDHDDDYDDDYGYPFGLSDTD
        A+ MP L HLQ+  N LTN GL AILDGCP LE LDLRQCFN+NL G L  +C  +IKD R P+D  DDY    FS      D+  +++  Y +G  DT+
Subjt:  AENMPNLRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYE---FSTEIIDHDDDYDDDYGYPFGLSDTD

AT4G05497.1 RNI-like superfamily protein1.3e-5445.27Show/hide
Query:  ATESNSNPNSVEE-ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSG---DRWDMDYDLEEMCRQAVERSCGQLISIN
        ++ S+  P +++  E RNW ELP ++TS IL +LG I+IL NAQ VC SWR++C+DP MWR ID+R      +  ++ Y +E +C +AV+ S G L+ IN
Subjt:  ATESNSNPNSVEE-ESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSG---DRWDMDYDLEEMCRQAVERSCGQLISIN

Query:  IEHFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSF-CLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPN
        I++      L+YI   S+ L RL +V C  +   G++EA  KLPLLE+L++++      + L+ +GQSCP+L++LKLN     +  CD+ ALAIAE MP 
Subjt:  IEHFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSF-CLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPN

Query:  LRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQL
        LRHLQ+F N L+  GL AIL+GCP L++L L QC N+N+ G +
Subjt:  LRHLQIFGNSLTNRGLEAILDGCPALESLDLRQCFNLNLAGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACGGAATCGAACTCGAACCCTAATTCGGTAGAAGAGGAATCCAGGAACTGGCTTGAACTGCCTGCAGATGTCACGTCTATCATTCTCCACAAGTTAGGCCCCAT
TGATATCCTCATCAACGCTCAAGACGTTTGCTCTTCGTGGCGTAAGATCTGCGAGGACCCTCTCATGTGGCGCGTCATCGATATGCGCTATTCCGGTGATCGGTGGGACA
TGGACTACGATTTGGAGGAGATGTGCAGGCAGGCTGTCGAACGGAGTTGTGGCCAATTGATTTCCATTAACATCGAGCATTTTGGTACCGATGATTTGCTCCACTATATC
ACTCAGAGTTCAAATCAACTTAGTAGACTCCGCCTTGTATATTGCAATCGCATCTCAGATGAGGGATTGATTGAGGCAGTTTCAAAACTTCCATTGTTGGAGGATCTTGA
GCTATCTTTCTGTTTATTTGATGTGGAAACTTTGGAAACTCTTGGTCAGAGTTGTCCTAGTCTGAAATCACTGAAACTGAACCGTCAGTTTTACAGACGGGTGGAATGTG
ATAGAGGAGCCCTTGCTATTGCTGAAAATATGCCTAATCTACGTCACCTTCAGATATTTGGCAACAGCCTAACTAACAGGGGATTGGAAGCCATTCTTGATGGTTGTCCT
GCTTTAGAATCTCTTGATTTACGCCAGTGTTTTAATTTGAATTTGGCAGGACAGTTGGGAACAAAATGTTCTGGAAAGATAAAAGACTTGCGCTTGCCTCATGATCCCAC
TGATGATTATGAATTTTCAACTGAAATTATTGATCATGATGATGATTATGATGACGATTATGGCTACCCCTTTGGTTTGTCCGACACTGATTTGTTGACTGATGATGATG
ACTACTATGAGTTCTCGGGGGGCAGCAATTTCTCTGACTATACAGATCTATATTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
CTACGCTGCCCATAACAAAACAAAGTTACTTGATGCGATTAGGAACTGTAAATGCGAGCAGAACCTTTCTCCTTTCCTTAACCAAACCCTAGTTCTTACTCATGATGATC
ATCCCAATCTCCATCTCCATCTCAAAATTCATCTGAATTATCCCTAAAAAATCACTATTAGTTTCAATTATTCCCTCTCCCATGGCCACGGAATCGAACTCGAACCCTAA
TTCGGTAGAAGAGGAATCCAGGAACTGGCTTGAACTGCCTGCAGATGTCACGTCTATCATTCTCCACAAGTTAGGCCCCATTGATATCCTCATCAACGCTCAAGACGTTT
GCTCTTCGTGGCGTAAGATCTGCGAGGACCCTCTCATGTGGCGCGTCATCGATATGCGCTATTCCGGTGATCGGTGGGACATGGACTACGATTTGGAGGAGATGTGCAGG
CAGGCTGTCGAACGGAGTTGTGGCCAATTGATTTCCATTAACATCGAGCATTTTGGTACCGATGATTTGCTCCACTATATCACTCAGAGTTCAAATCAACTTAGTAGACT
CCGCCTTGTATATTGCAATCGCATCTCAGATGAGGGATTGATTGAGGCAGTTTCAAAACTTCCATTGTTGGAGGATCTTGAGCTATCTTTCTGTTTATTTGATGTGGAAA
CTTTGGAAACTCTTGGTCAGAGTTGTCCTAGTCTGAAATCACTGAAACTGAACCGTCAGTTTTACAGACGGGTGGAATGTGATAGAGGAGCCCTTGCTATTGCTGAAAAT
ATGCCTAATCTACGTCACCTTCAGATATTTGGCAACAGCCTAACTAACAGGGGATTGGAAGCCATTCTTGATGGTTGTCCTGCTTTAGAATCTCTTGATTTACGCCAGTG
TTTTAATTTGAATTTGGCAGGACAGTTGGGAACAAAATGTTCTGGAAAGATAAAAGACTTGCGCTTGCCTCATGATCCCACTGATGATTATGAATTTTCAACTGAAATTA
TTGATCATGATGATGATTATGATGACGATTATGGCTACCCCTTTGGTTTGTCCGACACTGATTTGTTGACTGATGATGATGACTACTATGAGTTCTCGGGGGGCAGCAAT
TTCTCTGACTATACAGATCTATATTTTTATTGAAGGTTCAGTTTTAGAAGCACAGTGAGAAAACCAAACCCTGGCCCAATATTTACTTGCTGCGTCTCTGCCAATGGTAG
TTGGTCCAAGGAGCCTAGCAACTGTTGAATTGCAAGAGAAGAAGTATGAGAGGCTCTATTTCCATATCAAAGTTTGTTTGAGGTGGTCGAAGATGTGAGAGGTCCATATT
CCTGTCTCATCTGTTTCTCAAATTGGCATATTCCTGTCTCATCTGTTTCTCAAATTGGCATCAATCAATGTGTATACTAATATGATTTTACTTGATATT
Protein sequenceShow/hide protein sequence
MATESNSNPNSVEEESRNWLELPADVTSIILHKLGPIDILINAQDVCSSWRKICEDPLMWRVIDMRYSGDRWDMDYDLEEMCRQAVERSCGQLISINIEHFGTDDLLHYI
TQSSNQLSRLRLVYCNRISDEGLIEAVSKLPLLEDLELSFCLFDVETLETLGQSCPSLKSLKLNRQFYRRVECDRGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCP
ALESLDLRQCFNLNLAGQLGTKCSGKIKDLRLPHDPTDDYEFSTEIIDHDDDYDDDYGYPFGLSDTDLLTDDDDYYEFSGGSNFSDYTDLYFY