; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein SKIP19-like
Genome locationchr01:1141696..1147186
RNA-Seq ExpressionLsi01G001090
SyntenyLsi01G001090
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]8.4e-9964.19Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI INIE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LLQYI +SSN+LR+LRL  C  ISDEGL +AVS+LPLLE L+I F SFDVETL+T+G+C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDYDD
          SDF DY D
Subjt:  VDSDFLDYDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.4e-10064.04Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI INIE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LLQYI +SSNQLR+LRL  C  ISDEGL +AVS+LPLLE L+I F SFDVETL+T+G+C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDYDDFTRINYS
          SDF DY DF  I  S
Subjt:  VDSDFLDYDDFTRINYS

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]4.9e-9964.52Show/hide
Query:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT
        MES+ +  S  EARNWLELPA++ SMILL+LGAIEIL+SAQ+VCS WRKICKDPLMWRV+DMHN G+ +DMD+DLE MC  AVDRSCG+LIDINI+YFGT
Subjt:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT

Query:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ
        +ELLQYI +SSNQLRRLR+  C+ I+D GL+EAVS+LPLLEHL+I   SF  +TL+T+GRCC LLKSLKL  +   R  +  + +A+AIAE MP LR+LQ
Subjt:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ

Query:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFLV
        I G+ LT+ GLQAILDGCPDLESLDLRQCFNL L GQL  ECAER+K L LPHD   +D E   +T  FGD+DS D      FSDI     D DYY++  
Subjt:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFLV

Query:  DSDFLDYDDF
         S+F DY DF
Subjt:  DSDFLDYDDF

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]1.4e-9864.19Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI INIE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LL YI +SSNQLR+LRL  C  ISDEGL +AVS+LPLLE L+I F SFDVETL+T+G+C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDYDD
          SDF DY D
Subjt:  VDSDFLDYDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]1.2e-15685.2Show/hide
Query:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT
        MES+SVIQSEAEARNWL+LPAEVMSMILL+LGAIEILTSAQNVCSSWRKICKDPLMWRVIDM NSG+ YDMDHDLEIMC+HAVDRSCGQLIDINIEYFGT
Subjt:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT

Query:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ
        DELLQYI +SSNQLRRLRLADCYDISDEGLTEA+SRLPLLEHL+I  +SFDVETLKT+GRCCPLLK LKLIEEQYWR DMV+N+EALAIAETMP+LRHLQ
Subjt:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ

Query:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFG-----DEDSTDFSDIDGDYYDFLVDSDFLD
        IIGNGLTN+GLQAILDGCPDLESLDLRQCF+L L GQL KECAER KVLHLPHD + N  ECT KT +FG     DEDS DFS ID DYYDFLVDSDFLD
Subjt:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFG-----DEDSTDFSDIDGDYYDFLVDSDFLD

Query:  YDDFTRINYSDYEDFTNLGLVDH-HDFPEYY
        YDD TRINYSDYEDFT LGL DH  D  EYY
Subjt:  YDDFTRINYSDYEDFTNLGLVDH-HDFPEYY

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like2.4e-9964.52Show/hide
Query:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT
        MES+ +  S  EARNWLELPA++ SMILL+LGAIEIL+SAQ+VCS WRKICKDPLMWRV+DMHN G+ +DMD+DLE MC  AVDRSCG+LIDINI+YFGT
Subjt:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT

Query:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ
        +ELLQYI +SSNQLRRLR+  C+ I+D GL+EAVS+LPLLEHL+I   SF  +TL+T+GRCC LLKSLKL  +   R  +  + +A+AIAE MP LR+LQ
Subjt:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ

Query:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFLV
        I G+ LT+ GLQAILDGCPDLESLDLRQCFNL L GQL  ECAER+K L LPHD   +D E   +T  FGD+DS D      FSDI     D DYY++  
Subjt:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFLV

Query:  DSDFLDYDDF
         S+F DY DF
Subjt:  DSDFLDYDDF

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.6e-9864.19Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI I IE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LLQYI +SSNQLR LRL  C  ISDEGL +AVS+LPLLE L+I F SFDVETL+T+G+C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDYDD
          SDF DY D
Subjt:  VDSDFLDYDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X23.5e-9864.29Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI I IE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LLQYI +SSNQLR LRL  C  ISDEGL +AVS+LPLLE L+I F SFDVETL+T+G+C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDY
          SDF DY
Subjt:  VDSDFLDY

A0A6J1ILH5 F-box protein SKIP19-like1.6e-9864.29Show/hide
Query:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG
        MES+S   S   EARNWLELPA+V SMILL+LG ++ILT+AQ+VCSSWRKIC+DPLMWRV+DM  SGD +DMD+DLE MC+ AVDRSCGQLI INIE+FG
Subjt:  MESSSVIQS-EAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFG

Query:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL
        TD+LLQYI +SSNQLR+LRL  C  ISDEG  +AVS+LPLLE L+I F SFDVETL+T+G C PLLKSLKL  + Y RV+   ++ ALAIAE MP LRHL
Subjt:  TDELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHL

Query:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL
        QI GN LTN GL+AILDGCPDLESLDLRQCFNL LAGQL  +C+E++K L LPHD   +D E +T+   +GD+             TD    D DYY+F 
Subjt:  QIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDE-----------DSTDFSDIDGDYYDFL

Query:  VDSDFLDY
          SDF DY
Subjt:  VDSDFLDY

A0A6P3ZH66 F-box protein SKIP193.7e-9259.49Show/hide
Query:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT
        MESS     + E RNWLELP +V S IL RLGAIEILTSAQNVCSSWR ICKDPLMWR IDM N GD+Y MD+DLE MC+HA+D SCGQL+DINIE+FGT
Subjt:  MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGT

Query:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ
        DELL+Y+   S+ +RRLRL  CY ISD GL+EA ++LPLLE L+I + S   E L+ IG CCPLLKSLKL    +    +  ++EA+AIA++MP+LRHLQ
Subjt:  DELLQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQ

Query:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPN-DPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFL
        + GN LTN GLQAILDGCP LESLDLRQCFN+ LAG L K CAE++K L  P+D     + +     T   D+DS D      FSDI     DG+YY+F 
Subjt:  IIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPN-DPECTTKTTNFGDEDSTD------FSDI-----DGDYYDFL

Query:  VDSDFLDYDDF
          SD  D  DF
Subjt:  VDSDFLDYDDF

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.8e-6451Show/hide
Query:  VIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEY--FGTDEL
        V++ E +  NW ELP +++S ILLRL  +EIL +A+ VC SWR++ KDPL+WR IDM N    Y + + +E  C+H VD S G L++ NI+   F T  L
Subjt:  VIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEY--FGTDEL

Query:  LQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIG
        L Y+A  S+ LRRLR+     I+  G+ EA+ +LPLLE L++L+ S + E  KTIG+ CP LK+LKL+   +W     S+ +ALAIA+TMP L HLQ+I 
Subjt:  LQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIG

Query:  NGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHD
        NGLTN+GL AILDGCP LE LDLRQCFN+ L G LE++C ER+K    P+D
Subjt:  NGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHD

Q9M0U7 Putative F-box protein At4g054754.4e-5845.45Show/hide
Query:  QSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYI
        + + E  NW++LP E+ + ILLRL   +IL +A+ +C +WR+ICKDP MWR I++    D    + D E MC+H VD S G L++INIE+F +D LL YI
Subjt:  QSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYI

Query:  ARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKL----------IEEQYWRVDMVSNEEALAIAETMPQLR
           S  L+ L ++    ++++G+   + +LPLLE L I   S  ++ LK IG  CP LK+LKL          I +  +   +  +++ALAIAE+MP+LR
Subjt:  ARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKL----------IEEQYWRVDMVSNEEALAIAETMPQLR

Query:  HLQIIGNGLTNVGLQAILDGCPDLES-LDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP
        HLQ++GNGLTN GL AILDGCP LE  LD+R+CFN+ L G LEK C +R+K L  PHD   + P
Subjt:  HLQIIGNGLTNVGLQAILDGCPDLES-LDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP

Q9M0U9 F-box protein SKIP191.7e-8156.08Show/hide
Query:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIARSS
        E+ NW ELP E+ S IL RLGAIEIL +AQ VC SWR++CKDP MWR IDMHN GD  DMD++LEIMC+HAVDRS G L+DI I YFGT +LL YIA  S
Subjt:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIARSS

Query:  NQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLTNVGL
        + LR LRL  C  I+D+G  EAV +LP LE L++ + SF VE+L+ +G+CC  +K+LKL +         ++++ALAIAETMP+LRHLQ+ GNGL++ GL
Subjt:  NQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLTNVGL

Query:  QAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSDID---GD-----YYDFLVDSDFLDYDDF
         AILD C +LE LDLR+CFN+ L G L+K C E VKV+  P+D I +D +  +      DED  DFSDID   GD     YYDF   SDF DYD F
Subjt:  QAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSDID---GD-----YYDFLVDSDFLDYDDF

Q9S9V8 Putative F-box/LRR-repeat protein 92.3e-5448.93Show/hide
Query:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDM---HNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIA
        E RNW ELP E+ S ILLRLGAIEIL +AQ VC SWR++C+DP MWR ID+    N  +S ++ + +E +C  AVD S G L++INI+Y      L YIA
Subjt:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDM---HNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIA

Query:  RSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILF-FSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLT
          S+ LRRL + DC  +   G+ EA  +LPLLE LDI +  S   + LK +G+ CP L++LKL            ++ ALAIAETMP LRHLQ+  NGL+
Subjt:  RSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILF-FSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLT

Query:  NVGLQAILDGCPDLESLDLRQCFNLKLAGQLEK
          GL AIL+GCP L++L L QC N+ + G + K
Subjt:  NVGLQAILDGCPDLESLDLRQCFNLKLAGQLEK

Q9S9V9 Putative F-box/LRR-repeat protein 232.8e-7351.46Show/hide
Query:  IQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQY
        +  + + RNW ELP+++ S ILLRLGAIEIL +AQ VC  W ++CKDP MWR ID+ N  D     +DLE MC+HAVDRS G LI+I I Y+GT++L+ Y
Subjt:  IQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQY

Query:  IARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIE-EQYWRVDMVSNEEALAIAETMPQLRHLQIIGNG
        IA  S+ L+ L L  C+ I+DEG+ +AVS++PLLE+L++ +  F  E+L+ IGR CP LK+LKL    +    +   ++ A AIAE+MP+LRHLQ++GNG
Subjt:  IARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIE-EQYWRVDMVSNEEALAIAETMPQLRHLQIIGNG

Query:  LTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSD
        LTN GL AILDGCP LE LDLRQCFN+ L G L+K C ER+K L  P+D                D+DS D SD
Subjt:  LTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein1.2e-8256.08Show/hide
Query:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIARSS
        E+ NW ELP E+ S IL RLGAIEIL +AQ VC SWR++CKDP MWR IDMHN GD  DMD++LEIMC+HAVDRS G L+DI I YFGT +LL YIA  S
Subjt:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIARSS

Query:  NQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLTNVGL
        + LR LRL  C  I+D+G  EAV +LP LE L++ + SF VE+L+ +G+CC  +K+LKL +         ++++ALAIAETMP+LRHLQ+ GNGL++ GL
Subjt:  NQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLTNVGL

Query:  QAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSDID---GD-----YYDFLVDSDFLDYDDF
         AILD C +LE LDLR+CFN+ L G L+K C E VKV+  P+D I +D +  +      DED  DFSDID   GD     YYDF   SDF DYD F
Subjt:  QAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSDID---GD-----YYDFLVDSDFLDYDDF

AT4G05470.1 RNI-like superfamily protein2.3e-5444.15Show/hide
Query:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINI-EYFGTDELLQYIARS
        E RNW++LP E+ + ILLRL   +IL +AQ VC  WR+ICKDP MWR I   N+ D    + D   MC+H VD S G L++IN+ E+F +D LL YI  +
Subjt:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINI-EYFGTDELLQYIARS

Query:  SNQLRRLRLADCYD-ISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIE-EQYWRVD-------------MVSNEEALAIAETMPQ
           LR L L  C+  ++  G+  A++++PLLE L++      ++ LK IG  CP LK+LKL    + W                +  +++ALAIAE+MP+
Subjt:  SNQLRRLRLADCYD-ISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIE-EQYWRVD-------------MVSNEEALAIAETMPQ

Query:  LRHLQIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP
        L HLQ++ N LTN GL AILDGCP LE LD+R+CF + L G LEK C E +K L  P D   + P
Subjt:  LRHLQIIGNGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP

AT4G05475.1 RNI-like superfamily protein3.1e-5945.45Show/hide
Query:  QSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYI
        + + E  NW++LP E+ + ILLRL   +IL +A+ +C +WR+ICKDP MWR I++    D    + D E MC+H VD S G L++INIE+F +D LL YI
Subjt:  QSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYI

Query:  ARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKL----------IEEQYWRVDMVSNEEALAIAETMPQLR
           S  L+ L ++    ++++G+   + +LPLLE L I   S  ++ LK IG  CP LK+LKL          I +  +   +  +++ALAIAE+MP+LR
Subjt:  ARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKL----------IEEQYWRVDMVSNEEALAIAETMPQLR

Query:  HLQIIGNGLTNVGLQAILDGCPDLES-LDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP
        HLQ++GNGLTN GL AILDGCP LE  LD+R+CFN+ L G LEK C +R+K L  PHD   + P
Subjt:  HLQIIGNGLTNVGLQAILDGCPDLES-LDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDP

AT4G05490.1 RNI-like superfamily protein1.3e-6551Show/hide
Query:  VIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEY--FGTDEL
        V++ E +  NW ELP +++S ILLRL  +EIL +A+ VC SWR++ KDPL+WR IDM N    Y + + +E  C+H VD S G L++ NI+   F T  L
Subjt:  VIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEY--FGTDEL

Query:  LQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIG
        L Y+A  S+ LRRLR+     I+  G+ EA+ +LPLLE L++L+ S + E  KTIG+ CP LK+LKL+   +W     S+ +ALAIA+TMP L HLQ+I 
Subjt:  LQYIARSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIG

Query:  NGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHD
        NGLTN+GL AILDGCP LE LDLRQCFN+ L G LE++C ER+K    P+D
Subjt:  NGLTNVGLQAILDGCPDLESLDLRQCFNLKLAGQLEKECAERVKVLHLPHD

AT4G05497.1 RNI-like superfamily protein1.6e-5548.93Show/hide
Query:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDM---HNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIA
        E RNW ELP E+ S ILLRLGAIEIL +AQ VC SWR++C+DP MWR ID+    N  +S ++ + +E +C  AVD S G L++INI+Y      L YIA
Subjt:  EARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDM---HNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIA

Query:  RSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILF-FSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLT
          S+ LRRL + DC  +   G+ EA  +LPLLE LDI +  S   + LK +G+ CP L++LKL            ++ ALAIAETMP LRHLQ+  NGL+
Subjt:  RSSNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILF-FSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLT

Query:  NVGLQAILDGCPDLESLDLRQCFNLKLAGQLEK
          GL AIL+GCP L++L L QC N+ + G + K
Subjt:  NVGLQAILDGCPDLESLDLRQCFNLKLAGQLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAGCTCTGTTATTCAGTCGGAAGCTGAAGCGAGGAACTGGCTTGAACTGCCTGCAGAAGTAATGTCTATGATTCTTCTGAGGCTAGGCGCCATTGAAATCCT
CACCAGCGCTCAAAACGTCTGCTCTTCCTGGCGTAAGATCTGCAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTCGGGTGATTCTTACGACATGGATCACG
ATTTGGAGATCATGTGCAAGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCGCTCGGAGT
TCAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCTATGATATCTCAGATGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGACATCCTTTT
CTTTTCATTTGATGTGGAAACTTTGAAAACTATTGGACGGTGTTGCCCTCTTCTGAAATCGCTGAAACTGATCGAAGAACAGTATTGGAGGGTAGATATGGTGAGTAACG
AGGAGGCTCTTGCTATTGCTGAAACTATGCCTCAGTTACGTCACCTTCAGATAATTGGCAATGGCCTAACTAACGTAGGATTGCAGGCCATTCTTGATGGCTGTCCTGAT
TTAGAATCTCTTGACTTACGTCAATGTTTCAATTTAAAATTGGCCGGACAATTGGAAAAAGAATGTGCTGAAAGGGTCAAAGTTTTGCATCTGCCTCATGATCATATCCC
TAATGACCCTGAATGTACTACCAAAACTACCAATTTTGGTGATGAAGATTCGACTGATTTCTCAGACATTGATGGCGATTACTATGATTTCTTAGTAGACAGCGATTTCT
TAGATTATGACGACTTCACAAGAATCAATTACTCTGACTATGAGGACTTCACAAATCTCGGTCTCGTTGACCATCATGACTTCCCAGAATATTATTAA
mRNA sequenceShow/hide mRNA sequence
CTGAAATTTTGAATACAAATGTCATTAGAATCAGTTATTGCGGTTTCATGGCCAAACCCTAACATAAATGATCCTCATTTCCGTTTCAAAACGTCCCCTATTTATGCCAT
TTCCTCAGAAATTCAATAGAGTGTCCATTCAATTTGCTTATTTGCTGGTTTAATCCATTCCCATCTCATGGAGTCGAGCTCTGTTATTCAGTCGGAAGCTGAAGCGAGGA
ACTGGCTTGAACTGCCTGCAGAAGTAATGTCTATGATTCTTCTGAGGCTAGGCGCCATTGAAATCCTCACCAGCGCTCAAAACGTCTGCTCTTCCTGGCGTAAGATCTGC
AAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTCGGGTGATTCTTACGACATGGATCACGATTTGGAGATCATGTGCAAGCACGCTGTTGACCGTAGTTGTGG
TCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCGCTCGGAGTTCAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCTATGATA
TCTCAGATGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGACATCCTTTTCTTTTCATTTGATGTGGAAACTTTGAAAACTATTGGACGGTGT
TGCCCTCTTCTGAAATCGCTGAAACTGATCGAAGAACAGTATTGGAGGGTAGATATGGTGAGTAACGAGGAGGCTCTTGCTATTGCTGAAACTATGCCTCAGTTACGTCA
CCTTCAGATAATTGGCAATGGCCTAACTAACGTAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATTTAGAATCTCTTGACTTACGTCAATGTTTCAATTTAAAATTGG
CCGGACAATTGGAAAAAGAATGTGCTGAAAGGGTCAAAGTTTTGCATCTGCCTCATGATCATATCCCTAATGACCCTGAATGTACTACCAAAACTACCAATTTTGGTGAT
GAAGATTCGACTGATTTCTCAGACATTGATGGCGATTACTATGATTTCTTAGTAGACAGCGATTTCTTAGATTATGACGACTTCACAAGAATCAATTACTCTGACTATGA
GGACTTCACAAATCTCGGTCTCGTTGACCATCATGACTTCCCAGAATATTATTAACATTTGACAGGTGAAGGGACGTTGTGGCAGTGGGAAAGTCGAGACTTCAAGTCTC
GACCAAGAGAAAAGGCTGAAAATATCGAGACTTCAAGTCTCGACAATCCAGTCGTCAGGCAGCTCCAGTCGGTCAAAAAGTCGAGACTTCAAGTCTCGACTAGCTACCCT
TCTAGGCGTCAGGCATCTCGTCAGGCGTCAGGCATCTCGGCGAACGGCGTCAGGCATCTCGGCGCATTACGGCAGCAGGCGCATCACGGGTGTTTGGGGGTCGAGACTTC
AACTCTCGACCCCTCTCCTATATTTTCTCCCTCTTGCTTTCACTCTCGGCATTTCACTTTCGCTTTCACTCTCGGCATTTCACTTTCGCTTTCACCGGCTTCACTCCCTC
TTGCTTTCACTCTCGGCATTTCCTTTTCTAATATCAATTTCTCTCATTTTTCTTCTTCG
Protein sequenceShow/hide protein sequence
MESSSVIQSEAEARNWLELPAEVMSMILLRLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMHNSGDSYDMDHDLEIMCKHAVDRSCGQLIDINIEYFGTDELLQYIARS
SNQLRRLRLADCYDISDEGLTEAVSRLPLLEHLDILFFSFDVETLKTIGRCCPLLKSLKLIEEQYWRVDMVSNEEALAIAETMPQLRHLQIIGNGLTNVGLQAILDGCPD
LESLDLRQCFNLKLAGQLEKECAERVKVLHLPHDHIPNDPECTTKTTNFGDEDSTDFSDIDGDYYDFLVDSDFLDYDDFTRINYSDYEDFTNLGLVDHHDFPEYY