; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOB domain-containing protein
Genome locationchr01:1153248..1153679
RNA-Seq ExpressionLsi01G001110
SyntenyLsi01G001110
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052511.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]2.0e-2858.59Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKD-----VNILPLRWPGESSKSTAN
        E P +      + LP  W   +SK   N
Subjt:  E-PKD-----VNILPLRWPGESSKSTAN

XP_008439580.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]2.0e-2858.59Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKD-----VNILPLRWPGESSKSTAN
        E P +      + LP  W   +SK   N
Subjt:  E-PKD-----VNILPLRWPGESSKSTAN

XP_020234471.1 LOB domain-containing protein 36 [Cajanus cajan]2.2e-2751.91Show/hide
Query:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV
        LLRRKC  +C+FA +FP D  Q+F  VHR++GASNV KLLN+L+  +R+ A KSL YEAEA   DPV+GCVGFI +LQ+RL  +QTEL  A++ELSTYV 
Subjt:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV

Query:  SEPKDV-----NILPLRWPGESSKSTANDRG
         +   V      +LP   P    +S  N+ G
Subjt:  SEPKDV-----NILPLRWPGESSKSTANDRG

XP_022146502.1 LOB domain-containing protein 36-like [Momordica charantia]7.6e-2861.17Show/hide
Query:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEAEA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+
Subjt:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

Query:  VSE
         SE
Subjt:  VSE

XP_038881578.1 protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]1.4e-4283.18Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKCLPDCIFA HFPADQ +KFEA+H IYGASNV KLLNQL+ DERD+AAKSLIYEAEAWQ DPVHGCVGFI ILQKRLN+LQ EL+IARRELSTY+VS
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKDVN
        E P+D N
Subjt:  E-PKDVN

TrEMBL top hitse value%identityAlignment
A0A151RZM5 LOB domain-containing protein 361.1e-2751.91Show/hide
Query:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV
        LLRRKC  +C+FA +FP D  Q+F  VHR++GASNV KLLN+L+  +R+ A KSL YEAEA   DPV+GCVGFI +LQ+RL  +QTEL  A++ELSTYV 
Subjt:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV

Query:  SEPKDV-----NILPLRWPGESSKSTANDRG
         +   V      +LP   P    +S  N+ G
Subjt:  SEPKDV-----NILPLRWPGESSKSTANDRG

A0A1S3AYN9 LOB domain-containing protein 12-like9.7e-2958.59Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKD-----VNILPLRWPGESSKSTAN
        E P +      + LP  W   +SK   N
Subjt:  E-PKD-----VNILPLRWPGESSKSTAN

A0A427AY91 LOB domain-containing protein1.4e-2762.63Show/hide
Query:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        LLRRKC P+CIFA HFP DQ  KF  VHR++GASNV KLL QL  ++R+ A  SL YEAEA   DPVHGCVG+I +LQ +L ++Q +LS A+RELSTY+
Subjt:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

A0A5D3CQL4 LOB domain-containing protein 12-like9.7e-2958.59Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKD-----VNILPLRWPGESSKSTAN
        E P +      + LP  W   +SK   N
Subjt:  E-PKD-----VNILPLRWPGESSKSTAN

A0A6J1CZR4 LOB domain-containing protein 36-like3.7e-2861.17Show/hide
Query:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEAEA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+
Subjt:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

Query:  VSE
         SE
Subjt:  VSE

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 64.8e-2556.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

O04479 Protein ASYMMETRIC LEAVES 23.3e-2656.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

Q32SG3 LOB domain-containing protein 61.3e-2552.29Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I ILQ  L  LQ +L+ A+ ELS Y  +
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  EPKDVNILP
             +  P
Subjt:  EPKDVNILP

Q8LQH4 LOB domain-containing protein 64.8e-2556.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

Q9FKZ3 LOB domain-containing protein 363.9e-2758.16Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA   DPV+GCVG I ILQ RL  +  +L  A++EL+TYV
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein2.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein2.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein2.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.4 Lateral organ boundaries (LOB) domain family protein2.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT5G66870.1 ASYMMETRIC LEAVES 2-like 12.8e-2858.16Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA   DPV+GCVG I ILQ RL  +  +L  A++EL+TYV
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACA
TAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTG
ATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCA
GAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGGTGAATCGTCTAAGTCAACTGCCAATGACAGAGGGTCAATCATCATCAAGTCAACGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACA
TAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTG
ATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCA
GAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGGTGAATCGTCTAAGTCAACTGCCAATGACAGAGGGTCAATCATCATCAAGTCAACGGCTTGA
Protein sequenceShow/hide protein sequence
MAHHVQHVNLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
EPKDVNILPLRWPGESSKSTANDRGSIIIKSTA