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Lsi01G001290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCoiled-coil and C2 domain-containing protein 1-like isoform X2
Genome locationchr01:1330979..1334178
RNA-Seq ExpressionLsi01G001290
SyntenyLsi01G001290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581445.1 hypothetical protein SDJN03_21447, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4194.95Show/hide
Query:  MADESQQPQSESQ-PPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSESQ PPLEVDSAPPP PPP FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQ+K+R
Subjt:  MADESQQPQSESQ-PPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
KAG7034738.1 hypothetical protein SDJN02_04468, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-4093.94Show/hide
Query:  MADESQQPQSESQ-PPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSESQ PPLEVDSAPPP PPP FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQ+K+R
Subjt:  MADESQQPQSESQ-PPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
XP_004134646.1 uncharacterized protein LOC101211064 [Cucumis sativus]5.8e-4292.86Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSE+QPPL++DS PPPPPPP FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
XP_008439608.1 PREDICTED: uncharacterized protein LOC103484351 [Cucumis melo]1.3e-4194Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSESQPPLEVDS PPPPPPPP  FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
XP_038881750.1 uncharacterized protein LOC120073165 isoform X1 [Benincasa hispida]7.5e-4294.9Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADE QQPQSESQPPLEVDSAPPP PPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP+DPRKET KPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
TrEMBL top hitse value%identityAlignment
A0A0A0KM14 Uncharacterized protein2.8e-4292.86Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSE+QPPL++DS PPPPPPP FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
A0A1S3AZS8 uncharacterized protein LOC1034843516.2e-4294Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSESQPPLEVDS PPPPPPPP  FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
A0A5D3CQ43 Uncharacterized protein6.2e-4294Show/hide
Query:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
        MADESQQPQSESQPPLEVDS PPPPPPPP  FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQKK+R
Subjt:  MADESQQPQSESQPPLEVDSAPPPPPPPP--FDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSKRQKKTR
A0A6J1EGC9 uncharacterized protein LOC1114338471.1e-3577.12Show/hide
Query:  MPSPISLSIPFPFYPDAFMADESQQPQSESQPPLEVD-SAPPP-PPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP
        MPS  SL I   F  +A MAD+    +S+S+PPLE D SAPPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL+YCQELLELQRKWDEPYIELK P
Subjt:  MPSPISLSIPFPFYPDAFMADESQQPQSESQPPLEVD-SAPPP-PPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP

Query:  DDPRKETTKPSKRQKKTR
        +DPRKET KPSKRQKK R
Subjt:  DDPRKETTKPSKRQKKTR
A0A6J1KMP8 uncharacterized protein LOC1114970891.0e-3677.97Show/hide
Query:  MPSPISLSIPFPFYPDAFMADESQQPQSESQPPLEVD-SAPPP-PPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP
        MPSP SL I   F  +A MAD+    +S+SQPPL+ D SAPPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL+YCQELLELQRKWDEPYIELK P
Subjt:  MPSPISLSIPFPFYPDAFMADESQQPQSESQPPLEVD-SAPPP-PPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP

Query:  DDPRKETTKPSKRQKKTR
        +DPRKET KPSKRQKK R
Subjt:  DDPRKETTKPSKRQKKTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18400.1 unknown protein5.1e-2057.94Show/hide
Query:  MADESQQ--PQSESQPPLEVDSAP--PPP----PPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTK-PS
        MA+E ++  P+     P E  S P  PPP    PP  FDPSRMIGIIKRKALIK+LAAAYH ECL  C+ELLELQ++ DEP+++ KA +D RKET +  S
Subjt:  MADESQQ--PQSESQPPLEVDSAP--PPP----PPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTK-PS

Query:  KRQKKTR
        KR KK R
Subjt:  KRQKKTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCTCCCATCTCTCTGTCGATTCCCTTTCCTTTCTATCCAGACGCATTCATGGCTGACGAATCGCAACAACCCCAATCTGAATCTCAACCTCCGCTCGAAGTCGA
TTCTGCACCTCCGCCACCGCCTCCGCCTCCGTTTGATCCCAGTCGAATGATTGGTATCATTAAACGGAAGGCCTTGATAAAAGAATTAGCTGCTGCGTATCATGCTGAGT
GTCTTGTATACTGCCAAGAGCTTCTCGAGCTTCAAAGAAAGTGGGACGAGCCATATATCGAGTTAAAAGCACCTGATGATCCTAGAAAGGAGACAACGAAACCTAGCAAA
CGTCAAAAGAAAACCCGCTAG
mRNA sequenceShow/hide mRNA sequence
CGTACACATGCAAGAGGCAAAATACTTCAAGAGAAAAAAAAAATGTGCAGAAGAAGGAGAATGAAAGAATCAAAGATGGCAGCTTTCTGTGATTTCTTATCTGGAAGTGG
AAGGAGTATTTTTGGGGACACTGCTCACAGTGGTGAAGCAAATAAATAGCGGAAGCGATGCCATTGCCATTGACAACCCGATTGACTCCTCTCTTCCGAGGCACTGTAAC
AAAAAACCCTAATTCCAATTCTGGGAGACGACGACGACTCTGTTTCTGTCATTTAGGCAATACCAAATTATGAGTCCTAATACGAAGGCCCGCTTCAGAGATTGAGCTTT
TTTCATGCCCTCTCCCATCTCTCTGTCGATTCCCTTTCCTTTCTATCCAGACGCATTCATGGCTGACGAATCGCAACAACCCCAATCTGAATCTCAACCTCCGCTCGAAG
TCGATTCTGCACCTCCGCCACCGCCTCCGCCTCCGTTTGATCCCAGTCGAATGATTGGTATCATTAAACGGAAGGCCTTGATAAAAGAATTAGCTGCTGCGTATCATGCT
GAGTGTCTTGTATACTGCCAAGAGCTTCTCGAGCTTCAAAGAAAGTGGGACGAGCCATATATCGAGTTAAAAGCACCTGATGATCCTAGAAAGGAGACAACGAAACCTAG
CAAACGTCAAAAGAAAACCCGCTAGGCAATAAATATATTTGATACTGCTTACCTGACTTGCGAATCTGATGATTCTTCCGTTCTGCAAGGGAGGCCCATGCACAAAATTG
ATAATCTGCTATGAATAGGCTAATTACTCTATGGATCCATCAATTTGTACACTTAGTTACGAAAACAGTGAAGTATATAAAATATTTGTGTGCTGTATGTATTCATTTTG
TGTGCGATGATATCACTACATAGCGGTAGGATTTATTTTTTTGTCAGCAAAAACAGGCTTACGGAATTTATTCGTTCACGACCTTTGAATGATGGACTTCATTTCCTTTT
CTATACATTGCATTTAGCCTTTATTTGTTTGATTGAAACCATGTGAACCACCC
Protein sequenceShow/hide protein sequence
MPSPISLSIPFPFYPDAFMADESQQPQSESQPPLEVDSAPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETTKPSK
RQKKTR