; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTify domain-containing protein
Genome locationchr01:1419982..1421516
RNA-Seq ExpressionLsi01G001380
SyntenyLsi01G001380
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR010399 - Tify domain
IPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594460.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4583.87Show/hide
Query:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAAD-GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLS
        SSLRMRRNCNLELRLSP +TAA A +  +S++AD GS QSQQLTIFYNGRICVCDVTELQARAILKLATREMEEK LNE  SP+LQQSP PRTP  PGLS
Subjt:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAAD-GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLS

Query:  MKKSLQRFLQKRKHRVQATSPYNH
        MK+SLQRFLQKRKHRVQATSPYNH
Subjt:  MKKSLQRFLQKRKHRVQATSPYNH

KAG7026459.1 Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4583.06Show/hide
Query:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAAD-GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLS
        SS+RMRRNCNLELRLSP +TAA A +  +S++AD GS QSQQLTIFYNGRICVCDVTELQARAILKLATREMEEK LNE  SP+LQQSP PRTP  PGLS
Subjt:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAAD-GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLS

Query:  MKKSLQRFLQKRKHRVQATSPYNH
        MK+SLQRFLQKRKHRVQATSPYNH
Subjt:  MKKSLQRFLQKRKHRVQATSPYNH

XP_004134648.2 protein TIFY 5A [Cucumis sativus]2.3e-4781.82Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPI---STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQ-SPPPR
        M++N +SLRMRRNCNLELRLSP    +   AAVSD  SA AD SPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEE  L+E PSP+LQQ SPPPR
Subjt:  MKINPSSLRMRRNCNLELRLSPI---STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQ-SPPPR

Query:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH
        TP  PGLSMKKSLQRFLQKRKHRVQATSPYNH
Subjt:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH

XP_008439622.1 PREDICTED: protein TIFY 5A [Cucumis melo]3.8e-4781.06Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPISTAAAA----VSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPR
        MK+N +SLRMRRN NLELRLSP  ++AAA    VS + S  A GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEE  L+E PSP+LQQSPPPR
Subjt:  MKINPSSLRMRRNCNLELRLSPISTAAAA----VSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPR

Query:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH
        TP  PGLSMKKSLQRFLQKRKHRVQATSPYNH
Subjt:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH

XP_038883218.1 protein TIFY 5A-like [Benincasa hispida]6.8e-5289.06Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA
        MKIN SSLRMRRNCNLELRLSP S AAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTE QARAIL+LATREMEE A NE PS ILQQS PPR    
Subjt:  MKINPSSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA

Query:  PGLSMKKSLQRFLQKRKHRVQATSPYNH
        PGLSMKKSLQRFLQKRKHRVQATSPYNH
Subjt:  PGLSMKKSLQRFLQKRKHRVQATSPYNH

TrEMBL top hitse value%identityAlignment
A0A0A0KI51 Tify domain-containing protein1.1e-4781.82Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPI---STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQ-SPPPR
        M++N +SLRMRRNCNLELRLSP    +   AAVSD  SA AD SPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEE  L+E PSP+LQQ SPPPR
Subjt:  MKINPSSLRMRRNCNLELRLSPI---STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQ-SPPPR

Query:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH
        TP  PGLSMKKSLQRFLQKRKHRVQATSPYNH
Subjt:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH

A0A1S3AZ71 protein TIFY 5A1.9e-4781.06Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPISTAAAA----VSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPR
        MK+N +SLRMRRN NLELRLSP  ++AAA    VS + S  A GSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEE  L+E PSP+LQQSPPPR
Subjt:  MKINPSSLRMRRNCNLELRLSPISTAAAA----VSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPR

Query:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH
        TP  PGLSMKKSLQRFLQKRKHRVQATSPYNH
Subjt:  TPIAPGLSMKKSLQRFLQKRKHRVQATSPYNH

A0A6J1EE47 protein TIFY 5A4.8e-4380.47Show/hide
Query:  MKINPSSLRMRRNCNLELRLSPISTAAAAVSDHSSAAA---DGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT
        MK N SSLRMRRNCNLELRLSP S+A AAVSDHSSAA    + +PQSQQLTIFYNGRICVCD TELQA AILKLATREMEEK  NE P PILQQSP P T
Subjt:  MKINPSSLRMRRNCNLELRLSPISTAAAAVSDHSSAAA---DGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT

Query:  PIAPGLSMKKSLQRFLQKRKHRVQATSP
        P  PGLSMK+SLQRFLQKRKHR Q TSP
Subjt:  PIAPGLSMKKSLQRFLQKRKHRVQATSP

A0A6J1EFE1 protein TIFY 5A-like1.9e-4483.74Show/hide
Query:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSM
        SSLRMRRNCNLELRLSP +TAAAA    SS+A +GS QSQQLTIFYNGRICVCDVTELQARAILKLATRE+EEK LNE  SP+LQQSP  RTP  PGLSM
Subjt:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSM

Query:  KKSLQRFLQKRKHRVQATSPYNH
        K+SLQRFLQKRKHRVQATSPYNH
Subjt:  KKSLQRFLQKRKHRVQATSPYNH

A0A6J1KRQ2 protein TIFY 5A-like3.0e-4584.55Show/hide
Query:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSM
        SSLRMRRNCNLELRLSP +TAAAA    SS+A +GS QSQQLTIFYNGRICVCDVTELQA+AILKLATREMEEK LNE  SP+LQQSP PRTP  PGLSM
Subjt:  SSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSM

Query:  KKSLQRFLQKRKHRVQATSPYNH
        K+SLQRFLQKRKHRVQATSPYNH
Subjt:  KKSLQRFLQKRKHRVQATSPYNH

SwissProt top hitse value%identityAlignment
A2XSX6 Protein TIFY 92.9e-0534.26Show/hide
Query:  RLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQRFLQKRKH
        R  P  + A    +   AAA  +P    +T+FYNG + V DV+  +A AI+++AT   + K L    + +   +  P       L+  KSLQRFL KRK 
Subjt:  RLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQRFLQKRKH

Query:  RVQATSPY
        R+ +  PY
Subjt:  RVQATSPY

F4J078 Protein JAZ138.2e-0835.78Show/hide
Query:  RNCNLELRLSPI-STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQ
        + C+L+L LSP+ ST  +   D +      + +S+++  FY+GR+   D+ E+Q RAI+++A+++ E  AL  E  P+  +SP        G S+K+S++
Subjt:  RNCNLELRLSPI-STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQ

Query:  RFLQKRKHR
        RFL+KRK R
Subjt:  RFLQKRKHR

O64687 Protein TIFY 5B2.6e-1444.12Show/hide
Query:  INPSSLRMRRNCNLELRL--SPISTAAAAVSDHSSAAADGSP--QSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT
        +N   + M+  C+LELRL  S   +   +  D SS++    P  +SQ LTIFYNG +CV  D+T L+A AIL LA+R++EEK+L+   S     S PP  
Subjt:  INPSSLRMRRNCNLELRL--SPISTAAAAVSDHSSAAADGSP--QSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT

Query:  P------IAPGLSMKKSLQRFLQKRKHRVQATSPYN
        P           SMK+SL  FLQKR  R+QATSPY+
Subjt:  P------IAPGLSMKKSLQRFLQKRKHRVQATSPYN

Q7XV97 Protein TIFY 92.9e-0534.29Show/hide
Query:  PISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQRFLQKRKHRVQ
        P  + A    +   AAA  +P    +T+FYNG + V DV+  +A AI+++AT   + K L    + +   +  P       L+  KSLQRFL KRK R+ 
Subjt:  PISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQRFLQKRKHRVQ

Query:  ATSPY
        +  PY
Subjt:  ATSPY

Q8LBM2 Protein TIFY 5A5.6e-1743.75Show/hide
Query:  LRMRRNCNLELRLSPI------STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA
        +++++NC+LELRL P       S   + V   SS     + +SQ++TIFYNG++C   DVT LQAR+I+ +A+REM+ K+ +    P  + +      + 
Subjt:  LRMRRNCNLELRLSPI------STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA

Query:  -PGLSMKKSLQRFLQKRKHRVQATSPYN
         P  SMKKSLQ FLQKRK R+QATSPY+
Subjt:  -PGLSMKKSLQRFLQKRKHRVQATSPYN

Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 84.0e-1843.75Show/hide
Query:  LRMRRNCNLELRLSPI------STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA
        +++++NC+LELRL P       S   + V   SS     + +SQ++TIFYNG++C   DVT LQAR+I+ +A+REM+ K+ +    P  + +      + 
Subjt:  LRMRRNCNLELRLSPI------STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIA

Query:  -PGLSMKKSLQRFLQKRKHRVQATSPYN
         P  SMKKSLQ FLQKRK R+QATSPY+
Subjt:  -PGLSMKKSLQRFLQKRKHRVQATSPYN

AT2G34600.1 jasmonate-zim-domain protein 71.9e-1544.12Show/hide
Query:  INPSSLRMRRNCNLELRL--SPISTAAAAVSDHSSAAADGSP--QSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT
        +N   + M+  C+LELRL  S   +   +  D SS++    P  +SQ LTIFYNG +CV  D+T L+A AIL LA+R++EEK+L+   S     S PP  
Subjt:  INPSSLRMRRNCNLELRL--SPISTAAAAVSDHSSAAADGSP--QSQQLTIFYNGRICV-CDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRT

Query:  P------IAPGLSMKKSLQRFLQKRKHRVQATSPYN
        P           SMK+SL  FLQKR  R+QATSPY+
Subjt:  P------IAPGLSMKKSLQRFLQKRKHRVQATSPYN

AT3G22275.1 unknown protein5.8e-0935.78Show/hide
Query:  RNCNLELRLSPI-STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQ
        + C+L+L LSP+ ST  +   D +      + +S+++  FY+GR+   D+ E+Q RAI+++A+++ E  AL  E  P+  +SP        G S+K+S++
Subjt:  RNCNLELRLSPI-STAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQ

Query:  RFLQKRKHR
        RFL+KRK R
Subjt:  RFLQKRKHR

AT5G13220.1 jasmonate-zim-domain protein 102.7e-0635.04Show/hide
Query:  PISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATR---EMEEKALNEEPSPILQQSPPPR---------TPIAPGLSMKKSL
        PIS   A+++  S+    G   +  +TIFYNG + V  V+  +A  I+K+A     + +E ++  + S IL  +  P+          PIA     +KSL
Subjt:  PISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATR---EMEEKALNEEPSPILQQSPPPR---------TPIAPGLSMKKSL

Query:  QRFLQKRKHRVQATSPY
        QRFL+KRK R+ +TSPY
Subjt:  QRFLQKRKHRVQATSPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTAACCCCTCCTCTCTCAGAATGAGGCGAAACTGCAACTTGGAACTTCGTCTTTCTCCCATCTCCACCGCTGCCGCCGCTGTCTCCGACCACTCCTCCGCCGC
CGCTGACGGCAGCCCTCAAAGCCAACAACTCACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGTTACAGAGCTTCAGGCAAGAGCAATTTTAAAGTTGGCAACTA
GAGAAATGGAGGAGAAGGCTCTGAATGAAGAACCATCGCCGATACTACAACAGTCTCCGCCACCACGAACCCCGATCGCCCCGGGGCTCTCGATGAAGAAATCGCTGCAA
AGATTTCTGCAGAAGAGGAAGCATAGAGTTCAAGCAACTTCTCCATACAACCACTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGTTTTTCACAAAATCCACTTTAAAAATCAACCCAATATTTTTCTTTCTCTCTCCTTATAACTTCAAATTATATAAACAGCAACAAACTTACTTCTCCAACCAATTC
CATTTCATTTCTCTCATTATTATATATTTATTATTATTTCAATTTCCCATGAAAATTAACCCCTCCTCTCTCAGAATGAGGCGAAACTGCAACTTGGAACTTCGTCTTTC
TCCCATCTCCACCGCTGCCGCCGCTGTCTCCGACCACTCCTCCGCCGCCGCTGACGGCAGCCCTCAAAGCCAACAACTCACCATCTTCTACAACGGCCGGATCTGCGTCT
GTGACGTTACAGAGCTTCAGGCAAGAGCAATTTTAAAGTTGGCAACTAGAGAAATGGAGGAGAAGGCTCTGAATGAAGAACCATCGCCGATACTACAACAGTCTCCGCCA
CCACGAACCCCGATCGCCCCGGGGCTCTCGATGAAGAAATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCATAGAGTTCAAGCAACTTCTCCATACAACCACTGAAAAAT
ACCAAAAATGGAGACACGTTAAACCAAAATTTTAAAGATAATTTCAAGCCATTTGGGGCTTAGATCAAGTTCTTAATTATTTTGGTCCTTTGTTTGTTCCATATATATAT
ATATATGATGTAAGAGGAAGAACACCTAGAGGCTTTTGTAAATTACCTATCTATTTGTTTTTGTTTAATTCTTCAGCTTCAAAAATTAGCCTTTTTTTTCACTTTAATTC
ATTTGTTTTTAGATACCATATACAAACTCATTCATCTCAATTTTTCATTTTATACCACAAATGTGCCTTTTTTTACCTTCTTTTATATTACTACTCACTTATTTGATTGG
TTGGATTTGAA
Protein sequenceShow/hide protein sequence
MKINPSSLRMRRNCNLELRLSPISTAAAAVSDHSSAAADGSPQSQQLTIFYNGRICVCDVTELQARAILKLATREMEEKALNEEPSPILQQSPPPRTPIAPGLSMKKSLQ
RFLQKRKHRVQATSPYNH