; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionkatanin p60 ATPase-containing subunit A-like 2 isoform X2
Genome locationchr01:1492846..1494546
RNA-Seq ExpressionLsi01G001440
SyntenyLsi01G001440
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041569 - AAA ATPase, AAA+ lid domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647746.1 hypothetical protein Csa_003684 [Cucumis sativus]4.1e-5892.91Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPG+E+LPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQ ELPEDQQ VVPEEELPK+GPITASDI+ A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLR
        LRNTRPSAHLDAPRYEKFNADYGSQLR
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLR

XP_038883743.1 katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Benincasa hispida]1.5e-6096.09Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPGNEELPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQK LPEDQQ VVPEEELPK+GPITASDIEIA
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        LRNTRPSAHLDAPRYEKFNADYGSQLRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

XP_038883745.1 katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Benincasa hispida]1.5e-6096.09Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPGNEELPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQK LPEDQQ VVPEEELPK+GPITASDIEIA
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        LRNTRPSAHLDAPRYEKFNADYGSQLRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

XP_038883746.1 katanin p60 ATPase-containing subunit A-like 2 isoform X3 [Benincasa hispida]1.5e-6096.09Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPGNEELPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQK LPEDQQ VVPEEELPK+GPITASDIEIA
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        LRNTRPSAHLDAPRYEKFNADYGSQLRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

XP_038883747.1 katanin p60 ATPase-containing subunit A-like 2 isoform X4 [Benincasa hispida]1.5e-6096.09Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPGNEELPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQK LPEDQQ VVPEEELPK+GPITASDIEIA
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        LRNTRPSAHLDAPRYEKFNADYGSQLRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

TrEMBL top hitse value%identityAlignment
A0A0A0KKN3 AAA domain-containing protein2.0e-5892.91Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPG+E+LPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQ ELPEDQQ VVPEEELPK+GPITASDI+ A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLR
        LRNTRPSAHLDAPRYEKFNADYGSQLR
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLR

A0A1S3AYT2 katanin p60 ATPase-containing subunit A-like 2 isoform X31.7e-5791.41Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPG+E+LPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQ ELPEDQQ VVPEEELPK+GPITA DIE A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        L NTRPSAHLDAPRYEKFNADYGS LRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

A0A1S3AZU5 katanin p60 ATPase-containing subunit A-like 2 isoform X11.7e-5791.41Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPG+E+LPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQ ELPEDQQ VVPEEELPK+GPITA DIE A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        L NTRPSAHLDAPRYEKFNADYGS LRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

A0A1S3AZW4 katanin p60 ATPase-containing subunit A-like 2 isoform X21.7e-5791.41Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEARRAMFEELLPPQPG+E+LPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQ ELPEDQQ VVPEEELPK+GPITA DIE A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        L NTRPSAHLDAPRYEKFNADYGS LRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

A0A6J1EJI5 katanin p60 ATPase-containing subunit A-like 2 isoform X28.3e-5792.97Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLPEPEAR+AMFEELL PQ G EELPYDILM+RTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPE+QQ VVPEEELPK+GPITASDIEIA
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQLRH
        LRNTRPSAHLDAPRYEKFNADYGSQLRH
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQLRH

SwissProt top hitse value%identityAlignment
A0JMA9 Katanin p60 ATPase-containing subunit A-like 21.1e-1339.39Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVG--PI
        K+ILV LP  EAR+AM +  LPP   +       +L Y  L   T+GYSGSDIRLVCKEAAM+P+R++   LE    E           + LP +    +
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVG--PI

Query:  TASDIEIALRNTRPSAHLDAPRYEKFNADYGS
        T SD    L +T+PSA   A +Y  +  ++ S
Subjt:  TASDIEIALRNTRPSAHLDAPRYEKFNADYGS

P39955 Protein SAP18.1e-0935.43Show/hide
Query:  VKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIE
        V++  +PLPE + R   F++LL  Q     E  +D L++ TEGYSGSDI  + K+AAM PLR L  +L E ++E+               + PI   D +
Subjt:  VKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIE

Query:  IALRNTRPSAHLDA-PRYEKFNADYGS
         +L   +PS   D   +YEK+ + +GS
Subjt:  IALRNTRPSAHLDA-PRYEKFNADYGS

Q3B8D5 Katanin p60 ATPase-containing subunit A-like 22.2e-1439.39Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVG--PI
        K+ILV LP  EAR+AM +  LPP   +       +L Y  L + T+GYSGSDIRLVCKEAAM+P+R++   LE    E           ++LP +    +
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVG--PI

Query:  TASDIEIALRNTRPSAHLDAPRYEKFNADYGS
        T SD    L +T+PSA   A +Y  +  ++ S
Subjt:  TASDIEIALRNTRPSAHLDAPRYEKFNADYGS

Q8IYT4 Katanin p60 ATPase-containing subunit A-like 24.4e-1542.11Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKE---LPEDQQEVVPEEELPKVGP
        K+ILV LP  EAR+AM    LPP   +       EL Y +L Q TEGYSGSDI+LVC+EAAM+P+R++   LE  Q E   LP  Q ++V          
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKE---LPEDQQEVVPEEELPKVGP

Query:  ITASDIEIALRNTRPSAHLDAPRYEKFNADYGS
         T +D    L +T+PSA   A RY  +  ++ S
Subjt:  ITASDIEIALRNTRPSAHLDAPRYEKFNADYGS

Q9D3R6 Katanin p60 ATPase-containing subunit A-like 22.9e-1441.67Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELP--KVGPI
        K+ILV LP  EAR+AM    LPP   N       +L Y +L Q TEGYSGSDI+LVC+EAAM+P+R++ + LE  Q E             LP  ++  +
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNE------ELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELP--KVGPI

Query:  TASDIEIALRNTRPSAHLDAPRY----EKFNA
        T  D    L +T+PSA     RY    EKF +
Subjt:  TASDIEIALRNTRPSAHLDAPRY----EKFNA

Arabidopsis top hitse value%identityAlignment
AT1G80350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.4e-0830.16Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMA-QLEEQQKELPEDQQEVVPEEELPKVGPITASDIEI
        K+I +PLP+ E+R+A+    L       ++  + + +RTEGYSG D+  VC++A+M  +RR +A +  ++ K + +D              P+   D E 
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMA-QLEEQQKELPEDQQEVVPEEELPKVGPITASDIEI

Query:  ALRNTRPS-AHLDAPRYEKFNADYGS
        A+R  +PS +  D  ++EK+ +++GS
Subjt:  ALRNTRPS-AHLDAPRYEKFNADYGS

AT2G34560.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.8e-4165.08Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLP+PEARR MFE L+P QPG+E LP+D+L++++EGYSGSDIR++CKEAAMQPLRR +A L        ED+++VVPE+ELPK+GPI   DI+ A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQL
        L NTRPSAHL A  Y+KFN DYGSQ+
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQL

AT2G34560.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.8e-4165.08Show/hide
Query:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA
        K+ILVPLP+PEARR MFE L+P QPG+E LP+D+L++++EGYSGSDIR++CKEAAMQPLRR +A L        ED+++VVPE+ELPK+GPI   DI+ A
Subjt:  KKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDIEIA

Query:  LRNTRPSAHLDAPRYEKFNADYGSQL
        L NTRPSAHL A  Y+KFN DYGSQ+
Subjt:  LRNTRPSAHLDAPRYEKFNADYGSQL

AT2G45500.1 AAA-type ATPase family protein6.4e-0932.03Show/hide
Query:  MVKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDI
        +VK+I VPLP+   R+ +F+  L  QP +  +   D +++ TEGYSGSD++ +C+EAAM P+R L A +   Q                 KV  +   D 
Subjt:  MVKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDI

Query:  EIALRNTRPSAHLDA-PRYEKFNADYGS
          ++   RPS         E++N+++GS
Subjt:  EIALRNTRPSAHLDA-PRYEKFNADYGS

AT2G45500.2 AAA-type ATPase family protein6.4e-0932.03Show/hide
Query:  MVKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDI
        +VK+I VPLP+   R+ +F+  L  QP +  +   D +++ TEGYSGSD++ +C+EAAM P+R L A +   Q                 KV  +   D 
Subjt:  MVKKILVPLPEPEARRAMFEELLPPQPGN-EELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDI

Query:  EIALRNTRPSAHLDA-PRYEKFNADYGS
          ++   RPS         E++N+++GS
Subjt:  EIALRNTRPSAHLDA-PRYEKFNADYGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATATCCCCAAGTGATTCTCCTTTGACCATGGTAAAAAAGATACTTGTGCCTCTGCCAGAACCAGAAGCTAGAAGAGCTATGTTTGAAGAACTTCTTCCTCCTCA
ACCCGGAAATGAGGAACTTCCTTATGATATATTGATGCAAAGAACAGAAGGCTATTCAGGTTCTGATATTAGATTAGTGTGCAAAGAGGCTGCTATGCAGCCACTGCGCC
GCCTAATGGCCCAACTCGAGGAACAGCAAAAAGAGCTGCCTGAAGATCAACAGGAAGTAGTGCCTGAAGAAGAGTTGCCCAAAGTTGGACCAATCACAGCCTCCGACATA
GAGATTGCCTTACGAAACACGCGGCCATCAGCTCATTTGGATGCTCCCCGCTATGAAAAATTCAATGCCGACTATGGAAGTCAATTACGGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAATATCCCCAAGTGATTCTCCTTTGACCATGGTAAAAAAGATACTTGTGCCTCTGCCAGAACCAGAAGCTAGAAGAGCTATGTTTGAAGAACTTCTTCCTCCTCA
ACCCGGAAATGAGGAACTTCCTTATGATATATTGATGCAAAGAACAGAAGGCTATTCAGGTTCTGATATTAGATTAGTGTGCAAAGAGGCTGCTATGCAGCCACTGCGCC
GCCTAATGGCCCAACTCGAGGAACAGCAAAAAGAGCTGCCTGAAGATCAACAGGAAGTAGTGCCTGAAGAAGAGTTGCCCAAAGTTGGACCAATCACAGCCTCCGACATA
GAGATTGCCTTACGAAACACGCGGCCATCAGCTCATTTGGATGCTCCCCGCTATGAAAAATTCAATGCCGACTATGGAAGTCAATTACGGCACTGAAGGTATTAGTGTGT
TCTGATCTCAGGCTGCTTTTGGACATCAGCTCTGATTTGGAAATATTCTAGTTTTGAACCAGGTGGAAGGTGAGTTGGAAGTTTGACTAAGACTGTGTGTTGACATGATA
TATGATGTTAAAGTGAAATCAATTGTTAATACTGAGTAAAAAGTACTATAACTATTTAGATATGTTTTTTAAAGGTTAAATTGCAAATTTGGACCTTATAGTTTGAAAAA
AGTTAGAATTTAGTCCATATAGTTTATAATTAGAATTTAATCCTATAGTTTGATAAAACCCTCGTAGATAGTCCTTACAGTAGGGAAGAATGAGC
Protein sequenceShow/hide protein sequence
MIISPSDSPLTMVKKILVPLPEPEARRAMFEELLPPQPGNEELPYDILMQRTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPEDQQEVVPEEELPKVGPITASDI
EIALRNTRPSAHLDAPRYEKFNADYGSQLRH