; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:1799954..1800715
RNA-Seq ExpressionLsi01G001860
SyntenyLsi01G001860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052576.1 hypothetical protein E6C27_scaffold120G001810 [Cucumis melo var. makuwa]2.1e-4446.3Show/hide
Query:  DDSPMDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEESPAVI
        D  PM+ D KS      D ++  D  QPND++ +Q +Q+L D++P++LK  +EV     L P      S K+ N+EGRER+DRE ES KR R++E     
Subjt:  DDSPMDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEESPAVI

Query:  VQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQL
          SSDPS ESLKLIEEIV +YG HVDH+I E KYG+KDE + + +    G + ETF +K+RRLGCELERMK+D+ Q++DY++I+PR+TQIM+ +L +H++
Subjt:  VQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQL

Query:  FDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR
        FDP SKS    +K K      ++ +R+EV  +K R+   K L+ YR+  EE R +F+
Subjt:  FDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR

KAA0053662.1 hypothetical protein E6C27_scaffold135G00340 [Cucumis melo var. makuwa]1.3e-2236.26Show/hide
Query:  MDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSS--KIGNL------EGRER-QDREEESSKRTR---
        M+SDPKS+N+   + ++   D    D K+KQ++ D+ ++               SL+P   +E+ +   IG        EGRER  D   ESSKR R   
Subjt:  MDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSS--KIGNL------EGRER-QDREEESSKRTR---

Query:  IEESPAVIVQSSDPS--MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQI
           SP +I  +SD S   E +KLIEEIV IY  +++HV + AK    DEQ  N D+  C  + + F+QK++RLG EL+ MK D +Q      I+P V QI
Subjt:  IEESPAVIVQSSDPS--MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQI

Query:  MSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI
         +QL  +H+ FD S   R  + +           +++DE R+E+  +  RI+E KTL++  KTME R+R  RI
Subjt:  MSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI

KAE8647737.1 hypothetical protein Csa_003765 [Cucumis sativus]1.8e-4849.43Show/hide
Query:  MDDSPMDSDPKSMNNATCDFENKRDDN--QPNDQKLKQQVQDLDDNQPQD-LKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEES
        MDDSPMD DPKS        +NK+ D+  Q ND++ +Q+ QDL DNQ +D LK+ +EV     LHP S    SSK+ NL GRER+DRE ES KR R+ ES
Subjt:  MDDSPMDSDPKSMNNATCDFENKRDDN--QPNDQKLKQQVQDLDDNQPQD-LKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEES

Query:  PAVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLM
              SSDPS ESLKLIEEIV +YG HVDH+I E + G+KD+ + + +    G + ETF +K+RRLGCELERMK+D+ Q++DY++I+PR+ QIM+ +L 
Subjt:  PAVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLM

Query:  IHQLFDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR
        +H++FDP SK     +K K      +D +R+EVD ++ R++  K L+ YRK  EE RR+F+
Subjt:  IHQLFDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR

KAG6594502.1 hypothetical protein SDJN03_11055, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1932.65Show/hide
Query:  DDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKI-GNLEGRERQDREEESSKRTRIEESPAVI---------------VQSSDPS
        DD+Q  D + KQ++ D D   P      +  + +  +  +       +I G  E RER++  EESSKR R   SP VI               V+S +  
Subjt:  DDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKI-GNLEGRERQDREEESSKRTRIEESPAVI---------------VQSSDPS

Query:  MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQLFDPS---
         E L L+EEIV++Y  ++DH++  A+    DE   N  R  CGG+ E F + I+ LG EL RMKND  Q K+Y  I PR+ QIM+QL  +H+ FD S   
Subjt:  MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQLFDPS---

Query:  --------SKSRVYTDKHKMDEFRKEVDAVKLRIDETKTLQVYRK
                +K  +     ++++F+K++  +   +   KT+ +Y K
Subjt:  --------SKSRVYTDKHKMDEFRKEVDAVKLRIDETKTLQVYRK

KGN59675.1 hypothetical protein Csa_002140 [Cucumis sativus]1.8e-2738.19Show/hide
Query:  MDDSPMDSDPKSMNNATCDFENKRDDN-QPNDQKLKQQVQDLDDNQP-QDLKMNQEV-------VY--LHSLHP--------LSQMEKSSKIGNLEGRER
        M+ S M+SDPKS+N+     +N +D N  P   K+KQ+V +  + QP +D KMNQ++       VY  L SL+P        +  +    ++G  E R++
Subjt:  MDDSPMDSDPKSMNNATCDFENKRDDN-QPNDQKLKQQVQDLDDNQP-QDLKMNQEV-------VY--LHSLHP--------LSQMEKSSKIGNLEGRER

Query:  QDRE--EESSKRTRIEESP---AVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDD
        +D +   ESSKR RI +SP    + + S   S E +KLIEEIV IY  +++HV +  K    DEQ  N D+T C  + E F QK++RLG EL  MK D +
Subjt:  QDRE--EESSKRTRIEESP---AVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDD

Query:  QFKDYMFIQPRVTQIMSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI
        Q ++Y  I+PRV QI +QL  +H  FD S   R    +           +++DE  KE+  + LRI+E K L++  KTME R+R  RI
Subjt:  QFKDYMFIQPRVTQIMSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI

TrEMBL top hitse value%identityAlignment
A0A0A0KI09 Uncharacterized protein8.8e-4949.43Show/hide
Query:  MDDSPMDSDPKSMNNATCDFENKRDDN--QPNDQKLKQQVQDLDDNQPQD-LKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEES
        MDDSPMD DPKS        +NK+ D+  Q ND++ +Q+ QDL DNQ +D LK+ +EV     LHP S    SSK+ NL GRER+DRE ES KR R+ ES
Subjt:  MDDSPMDSDPKSMNNATCDFENKRDDN--QPNDQKLKQQVQDLDDNQPQD-LKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEES

Query:  PAVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLM
              SSDPS ESLKLIEEIV +YG HVDH+I E + G+KD+ + + +    G + ETF +K+RRLGCELERMK+D+ Q++DY++I+PR+ QIM+ +L 
Subjt:  PAVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLM

Query:  IHQLFDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR
        +H++FDP SK     +K K      +D +R+EVD ++ R++  K L+ YRK  EE RR+F+
Subjt:  IHQLFDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR

A0A0A0LCD3 Uncharacterized protein8.5e-2838.19Show/hide
Query:  MDDSPMDSDPKSMNNATCDFENKRDDN-QPNDQKLKQQVQDLDDNQP-QDLKMNQEV-------VY--LHSLHP--------LSQMEKSSKIGNLEGRER
        M+ S M+SDPKS+N+     +N +D N  P   K+KQ+V +  + QP +D KMNQ++       VY  L SL+P        +  +    ++G  E R++
Subjt:  MDDSPMDSDPKSMNNATCDFENKRDDN-QPNDQKLKQQVQDLDDNQP-QDLKMNQEV-------VY--LHSLHP--------LSQMEKSSKIGNLEGRER

Query:  QDRE--EESSKRTRIEESP---AVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDD
        +D +   ESSKR RI +SP    + + S   S E +KLIEEIV IY  +++HV +  K    DEQ  N D+T C  + E F QK++RLG EL  MK D +
Subjt:  QDRE--EESSKRTRIEESP---AVIVQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDD

Query:  QFKDYMFIQPRVTQIMSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI
        Q ++Y  I+PRV QI +QL  +H  FD S   R    +           +++DE  KE+  + LRI+E K L++  KTME R+R  RI
Subjt:  QFKDYMFIQPRVTQIMSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI

A0A5A7UD05 Uncharacterized protein6.3e-2336.26Show/hide
Query:  MDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSS--KIGNL------EGRER-QDREEESSKRTR---
        M+SDPKS+N+   + ++   D    D K+KQ++ D+ ++               SL+P   +E+ +   IG        EGRER  D   ESSKR R   
Subjt:  MDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSS--KIGNL------EGRER-QDREEESSKRTR---

Query:  IEESPAVIVQSSDPS--MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQI
           SP +I  +SD S   E +KLIEEIV IY  +++HV + AK    DEQ  N D+  C  + + F+QK++RLG EL+ MK D +Q      I+P V QI
Subjt:  IEESPAVIVQSSDPS--MESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQI

Query:  MSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI
         +QL  +H+ FD S   R  + +           +++DE R+E+  +  RI+E KTL++  KTME R+R  RI
Subjt:  MSQLLMIHQLFDPSSKSRVYTDK-----------HKMDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI

A0A5D3CSR5 Uncharacterized protein1.0e-4446.3Show/hide
Query:  DDSPMDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEESPAVI
        D  PM+ D KS      D ++  D  QPND++ +Q +Q+L D++P++LK  +EV     L P      S K+ N+EGRER+DRE ES KR R++E     
Subjt:  DDSPMDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEESPAVI

Query:  VQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQL
          SSDPS ESLKLIEEIV +YG HVDH+I E KYG+KDE + + +    G + ETF +K+RRLGCELERMK+D+ Q++DY++I+PR+TQIM+ +L +H++
Subjt:  VQSSDPSMESLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQL

Query:  FDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR
        FDP SKS    +K K      ++ +R+EV  +K R+   K L+ YR+  EE R +F+
Subjt:  FDPSSKSRVYTDKHK------MDEFRKEVDAVKLRIDETKTLQVYRKTMEERRRYFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATTCTCCGATGGATTCAGATCCGAAATCCATGAACAACGCGACTTGTGATTTCGAGAACAAACGAGATGATAACCAGCCAAACGATCAGAAATTGAAACAACA
AGTTCAAGATCTTGATGATAATCAGCCACAGGATTTGAAAATGAATCAAGAAGTTGTATATCTGCATTCATTACATCCTCTGTCTCAAATGGAGAAATCTTCGAAAATAG
GAAATCTGGAAGGAAGAGAAAGGCAGGATCGTGAAGAAGAATCATCGAAACGAACAAGAATCGAAGAATCTCCTGCAGTCATTGTTCAATCTTCAGATCCGTCTATGGAG
TCTCTGAAATTAATCGAGGAAATCGTGACAATATACGGTTACCACGTCGATCATGTAATTGAAGAAGCGAAATATGGAATTAAAGATGAACAGATCTCCAATCTTGATCG
AACTATGTGCGGTGGCGTGGGTGAAACATTTGCACAGAAAATCAGGCGATTGGGATGTGAATTAGAACGAATGAAGAATGATGACGATCAATTCAAGGATTATATGTTCA
TACAACCCCGTGTTACTCAAATTATGAGTCAATTGTTAATGATCCATCAACTATTTGATCCCTCTTCAAAATCTAGGGTTTATACGGATAAGCATAAAATGGATGAATTC
AGGAAAGAAGTTGATGCGGTAAAACTGAGAATTGACGAAACGAAAACCTTGCAAGTGTACAGGAAGACGATGGAGGAAAGACGGAGGTATTTCAGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGATTCTCCGATGGATTCAGATCCGAAATCCATGAACAACGCGACTTGTGATTTCGAGAACAAACGAGATGATAACCAGCCAAACGATCAGAAATTGAAACAACA
AGTTCAAGATCTTGATGATAATCAGCCACAGGATTTGAAAATGAATCAAGAAGTTGTATATCTGCATTCATTACATCCTCTGTCTCAAATGGAGAAATCTTCGAAAATAG
GAAATCTGGAAGGAAGAGAAAGGCAGGATCGTGAAGAAGAATCATCGAAACGAACAAGAATCGAAGAATCTCCTGCAGTCATTGTTCAATCTTCAGATCCGTCTATGGAG
TCTCTGAAATTAATCGAGGAAATCGTGACAATATACGGTTACCACGTCGATCATGTAATTGAAGAAGCGAAATATGGAATTAAAGATGAACAGATCTCCAATCTTGATCG
AACTATGTGCGGTGGCGTGGGTGAAACATTTGCACAGAAAATCAGGCGATTGGGATGTGAATTAGAACGAATGAAGAATGATGACGATCAATTCAAGGATTATATGTTCA
TACAACCCCGTGTTACTCAAATTATGAGTCAATTGTTAATGATCCATCAACTATTTGATCCCTCTTCAAAATCTAGGGTTTATACGGATAAGCATAAAATGGATGAATTC
AGGAAAGAAGTTGATGCGGTAAAACTGAGAATTGACGAAACGAAAACCTTGCAAGTGTACAGGAAGACGATGGAGGAAAGACGGAGGTATTTCAGAATCTGA
Protein sequenceShow/hide protein sequence
MDDSPMDSDPKSMNNATCDFENKRDDNQPNDQKLKQQVQDLDDNQPQDLKMNQEVVYLHSLHPLSQMEKSSKIGNLEGRERQDREEESSKRTRIEESPAVIVQSSDPSME
SLKLIEEIVTIYGYHVDHVIEEAKYGIKDEQISNLDRTMCGGVGETFAQKIRRLGCELERMKNDDDQFKDYMFIQPRVTQIMSQLLMIHQLFDPSSKSRVYTDKHKMDEF
RKEVDAVKLRIDETKTLQVYRKTMEERRRYFRI