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Lsi01G001870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:1802816..1803649
RNA-Seq ExpressionLsi01G001870
SyntenyLsi01G001870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052577.1 hypothetical protein E6C27_scaffold120G001820 [Cucumis melo var. makuwa]8.8e-7360.99Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETE
        MTVTEREE+GNSSNT +VEIKKE V     E++  D  LN  LKD      S D+  I  EEED EES RSTKRTRT ESD+AES+ I    N+E ++ E
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETE

Query:  WGMDPLDITKEIVLKYHDFIDEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL
         GMDPL++ +EIVLKYHDFI+EIYQML    KD+ KDE K+VKIQWQKW GI+DR N+LV+ LNRSLKT+  EM WMKS++   +EYS+R THVPDL+AL
Subjt:  WGMDPLDITKEIVLKYHDFIDEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL

Query:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD
        LRDIN RIE SPHF  VSD+  R EVL +CLDELE SKE+LTEMVEVI+ELK LDL+ +   EDGE +   E+  DE ++++
Subjt:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD

KGN49359.1 hypothetical protein Csa_002997 [Cucumis sativus]8.6e-6857.35Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA---------LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEE
        MTVTEREE+GNSSNT +VEIK E VE   F L   E  ++ D+ +S + K          +  E+EEDAEES RSTKR RT ESD+ E S I   A++EE
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA---------LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEE

Query:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL
        ++ E G+DPL++ +EIVLKYHDFI+EIYQML    KDE+K+VKIQWQKW  I+D+ N++V+ L RSLKT+  EM WMKS+DE  +EYS+R+THVPDL+AL
Subjt:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL

Query:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD
        LRDIN RIESSP+F +VSD+  R EVL +CLDELE S+E+L EM EVI+ELKELDL+D+E  E   + E++ D  Q+++
Subjt:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD

XP_011658523.2 rho GTPase-activating protein gacV [Cucumis sativus]1.7e-6048.19Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDET
        MT TEREE+GNSS T +VEIK E      E E+ED +  LN  L   D++       +  E+EEDAEES RSTKR RT E D+ E S I  A+N++ ++ 
Subjt:  MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDET

Query:  EWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKE------------------------------------------------VKIQWQKWCGIIDR
        E G+DPL++ +EI+LKYHD I+EIYQMLKDE KDE+K+                                                VKIQWQKW  I+D+
Subjt:  EWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKE------------------------------------------------VKIQWQKWCGIIDR

Query:  ANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELD
         N++V+ LN SLKT+  EM WMKS+DE  +EYS+R+THVPDL+ALLRDIN RIESSP+F +VSD+  R  VL +CLDELE S+E+L EMVEVI+ELKEL 
Subjt:  ANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELD

Query:  LEDEEDGELDLDLELEADEFQELDLPDAEETE
        L+D+ED E      LE    +E++  +AE  E
Subjt:  LEDEEDGELDLDLELEADEFQELDLPDAEETE

XP_038881500.1 interaptin-like [Benincasa hispida]1.1e-8365Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEV------EEEDFDLWLNEVLKDFD--SFTSSIDKALISEE--EEDAEESARSTKRTRTKESDKAESMINKAANMEE
        MTVTE+ E+ NSSNTK+VEIKKE+V      EE+D DLWLNE++KD D       I+K LI+EE  EEDAEE  RSTKRTRT ES     M N AAN E 
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEV------EEEDFDLWLNEVLKDFD--SFTSSIDKALISEE--EEDAEESARSTKRTRTKESDKAESMINKAANMEE

Query:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPK------DERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHV
        DE+EWG+DPL+IT+EIVLKY DFI +I+QMLKDE K      DE  E KIQWQKW  I++RA VLV++LNR L TLA EM WMKS+DEF+KEY+LRETHV
Subjt:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPK------DERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHV

Query:  PDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDL-------EDEEDGELDLDLELEADEFQELDLPDAEETE
        PDL+ALLRDINT IESS HF LVSD+  R EVL++CLDELERS E+LTEMVEVI+ELKEL+L       ED EDGE +L LELE DE++ELDL   E+TE
Subjt:  PDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDL-------EDEEDGELDLDLELEADEFQELDLPDAEETE

XP_038902312.1 myelin transcription factor 1-like [Benincasa hispida]8.1e-5047.84Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPL
        MTV EREE+GNSSNTK+ E KK+ VEEE+ D+ L        +  + I K  I+EE +D EES RS+KR+R KES++AES IN+    E D +E G DPL
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPL

Query:  DITKEIVLKYHDFIDEIY-QMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIE
          T+EIV++YHDFID IY Q+LK++            QKW  I++R  +LVK++NRSL+T+  EM  ++++++F+K+Y  R+TH+P +++LLR IN+RIE
Subjt:  DITKEIVLKYHDFIDEIY-QMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIE

Query:  SSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE
        SS +F LVS+I  R +VL +CL ELE SK++L+EM++VI+ LKELDL+ E+D +             + D  D EETE
Subjt:  SSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE

TrEMBL top hitse value%identityAlignment
A0A0A0KH35 Uncharacterized protein3.3e-2537.11Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDE-----TEW
        MT+TE EE  NSSNTK  +IK + +++++ D  +N  +    S   +I+  L +      EE  RS KR+R  ESD+AES  N   N +E        + 
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDE-----TEW

Query:  GMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDIN
        G DPL   +EI+LKY+DFI+ +YQ+LK+   DE+K      Q W  I+ R   L   L+  L  L F++  ++    F+K+Y+ R +H+P++I ++  IN
Subjt:  GMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDIN

Query:  TRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEED
          I SS  FSLV D   R +VL +CL E ER ++ L+ ++E ++ LK++ LE + D
Subjt:  TRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEED

A0A0A0KIE8 Uncharacterized protein1.3e-4836.26Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDET
        MT TEREE+GNSS T +VEIK E      E E+ED +  LN  L   D++       +  E+EEDAEES RSTKR RT E D+ E S I  A+N++ ++ 
Subjt:  MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDET

Query:  EWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKE--------------------------------------------------------------
        E G+DPL++ +EI+LKYHD I+EIYQMLKDE KDE+K+                                                              
Subjt:  EWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKE--------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------VK
                                                                                                          VK
Subjt:  --------------------------------------------------------------------------------------------------VK

Query:  IQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTE
        IQWQKW  I+D+ N++V+ LN SLKT+  EM WMKS+DE  +EYS+R+THVPDL+ALLRDIN RIESSP+F +VSD+  R EVL +CLDELE S+E+L E
Subjt:  IQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTE

Query:  MVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE
        MVEVI+ELKEL L+D+ED E      LE    +E++  +AE  E
Subjt:  MVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE

A0A0A0KKJ1 Uncharacterized protein4.1e-6857.35Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA---------LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEE
        MTVTEREE+GNSSNT +VEIK E VE   F L   E  ++ D+ +S + K          +  E+EEDAEES RSTKR RT ESD+ E S I   A++EE
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA---------LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEE

Query:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL
        ++ E G+DPL++ +EIVLKYHDFI+EIYQML    KDE+K+VKIQWQKW  I+D+ N++V+ L RSLKT+  EM WMKS+DE  +EYS+R+THVPDL+AL
Subjt:  DETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL

Query:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD
        LRDIN RIESSP+F +VSD+  R EVL +CLDELE S+E+L EM EVI+ELKELDL+D+E  E   + E++ D  Q+++
Subjt:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD

A0A5A7UDN3 Uncharacterized protein4.3e-7360.99Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETE
        MTVTEREE+GNSSNT +VEIKKE V     E++  D  LN  LKD      S D+  I  EEED EES RSTKRTRT ESD+AES+ I    N+E ++ E
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETE

Query:  WGMDPLDITKEIVLKYHDFIDEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL
         GMDPL++ +EIVLKYHDFI+EIYQML    KD+ KDE K+VKIQWQKW GI+DR N+LV+ LNRSLKT+  EM WMKS++   +EYS+R THVPDL+AL
Subjt:  WGMDPLDITKEIVLKYHDFIDEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIAL

Query:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD
        LRDIN RIE SPHF  VSD+  R EVL +CLDELE SKE+LTEMVEVI+ELK LDL+ +   EDGE +   E+  DE ++++
Subjt:  LRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD

A0A5D3CBX0 Uncharacterized protein6.5e-2936.5Show/hide
Query:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEE-----DAEESARSTKRTRTKESDKAESMINKAANMEEDE---
        M+ TE E+ GNSSNT + +IKKE ++E++ D+              ++D   ++ EEE      ++E  RS KR R   S++AES      N +E E   
Subjt:  MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEE-----DAEESARSTKRTRTKESDKAESMINKAANMEEDE---

Query:  -------TEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWC-GIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHV
                E G DPL +T+E++LKY++FID +YQ+LK+   DE K      Q W   IIDR + LV +L R L+ +A +MA ++++DE +  Y  ++TH+
Subjt:  -------TEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWC-GIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHV

Query:  PDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLE
        P +++ +R +N  I SS  F LVSDI  RG+VL+ CL E ER +++L++ ++ ++ +K   +E
Subjt:  PDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTACAGAGAGAGAAGAGAAAGGTAATTCATCGAACACGAAACTTGTAGAAATCAAGAAGGAAGAAGTAGAAGAAGAAGATTTCGACCTTTGGTTGAACGAAGT
GTTGAAGGATTTCGATTCGTTTACTTCATCAATCGATAAAGCTCTGATTAGTGAAGAGGAGGAAGATGCCGAAGAATCGGCGAGGTCAACGAAACGAACAAGAACCAAAG
AATCAGACAAAGCAGAATCAATGATAAATAAGGCGGCGAATATGGAGGAAGATGAAACTGAATGGGGAATGGATCCTCTGGACATAACCAAGGAAATAGTATTGAAATAC
CACGACTTCATTGACGAAATTTATCAAATGTTGAAAGATGAACCGAAAGATGAACGGAAAGAAGTAAAAATCCAATGGCAGAAATGGTGTGGGATTATTGACAGAGCAAA
TGTCCTGGTTAAGTCTCTGAATCGAAGTCTGAAAACACTGGCTTTCGAAATGGCATGGATGAAATCCATGGATGAATTTAAGAAGGAATATTCTCTCAGAGAAACCCATG
TTCCTGATCTAATAGCTTTACTTCGAGACATAAATACACGTATAGAATCTTCCCCTCATTTCAGCCTTGTTTCAGACATAAACATGAGGGGAGAAGTGTTAACACTGTGT
TTAGATGAGCTTGAGAGATCCAAGGAAGATTTGACTGAAATGGTTGAAGTAATCGAAGAACTCAAGGAATTAGATTTAGAAGATGAAGAAGATGGAGAATTAGATTTAGA
TTTAGAATTAGAAGCTGATGAGTTTCAGGAATTAGATTTACCAGATGCTGAAGAAACAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTACAGAGAGAGAAGAGAAAGGTAATTCATCGAACACGAAACTTGTAGAAATCAAGAAGGAAGAAGTAGAAGAAGAAGATTTCGACCTTTGGTTGAACGAAGT
GTTGAAGGATTTCGATTCGTTTACTTCATCAATCGATAAAGCTCTGATTAGTGAAGAGGAGGAAGATGCCGAAGAATCGGCGAGGTCAACGAAACGAACAAGAACCAAAG
AATCAGACAAAGCAGAATCAATGATAAATAAGGCGGCGAATATGGAGGAAGATGAAACTGAATGGGGAATGGATCCTCTGGACATAACCAAGGAAATAGTATTGAAATAC
CACGACTTCATTGACGAAATTTATCAAATGTTGAAAGATGAACCGAAAGATGAACGGAAAGAAGTAAAAATCCAATGGCAGAAATGGTGTGGGATTATTGACAGAGCAAA
TGTCCTGGTTAAGTCTCTGAATCGAAGTCTGAAAACACTGGCTTTCGAAATGGCATGGATGAAATCCATGGATGAATTTAAGAAGGAATATTCTCTCAGAGAAACCCATG
TTCCTGATCTAATAGCTTTACTTCGAGACATAAATACACGTATAGAATCTTCCCCTCATTTCAGCCTTGTTTCAGACATAAACATGAGGGGAGAAGTGTTAACACTGTGT
TTAGATGAGCTTGAGAGATCCAAGGAAGATTTGACTGAAATGGTTGAAGTAATCGAAGAACTCAAGGAATTAGATTTAGAAGATGAAGAAGATGGAGAATTAGATTTAGA
TTTAGAATTAGAAGCTGATGAGTTTCAGGAATTAGATTTACCAGATGCTGAAGAAACAGAGTAA
Protein sequenceShow/hide protein sequence
MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPLDITKEIVLKY
HDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLC
LDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE