; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G001970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G001970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr01:1868364..1868816
RNA-Seq ExpressionLsi01G001970
SyntenyLsi01G001970
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.1e-2853.51Show/hide
Query:  LRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCL
        L GSK   P S WKV + N+L  P Q+LT+HCKSKD+DLGEH+L+VG+ F W+FKENL STT +WC+  T         +VFW E+ DWLA RCN+  C+
Subjt:  LRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCL

Query:  WIARTSGIYIQNIA
        W+A+  GIYI N++
Subjt:  WIARTSGIYIQNIA

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]5.5e-2852.5Show/hide
Query:  GMPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLAS
        G PC      GSK   PLS+WKV I ++L  P + L +HCKSKD+DLGEH+LQV Q+F W+FKENL STTL+WCT  T         +VFW E+ +WLA 
Subjt:  GMPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLAS

Query:  RCNFRFCLWIARTSGIYIQN
        RC++R C+W+A+  GIY+ N
Subjt:  RCNFRFCLWIARTSGIYIQN

KAE8648119.1 hypothetical protein Csa_004728 [Cucumis sativus]6.9e-3157.02Show/hide
Query:  CSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCN
        CS+ S+  SKY    S W V I NEL   NQ L +HCKSKDD+LG+H ++ GQ++ W+FKEN + TTL+WCT  T P N H  FEVFWRE+G+WL SRCN
Subjt:  CSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCN

Query:  FRFCLWIARTSGIY
        FR C+W AR  G Y
Subjt:  FRFCLWIARTSGIY

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3055.93Show/hide
Query:  GSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWI
        GSK   PLS+WKV I N+L  P QTL  HCKSK+DDLG+H LQVG+ + WEFKEN+ISTT +WCTF T  LN     +VFW E   WLA RCN   C+W+
Subjt:  GSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWI

Query:  ARTSGIYIQNIAQGSMDL
        A+  G+Y+ NI +G  +L
Subjt:  ARTSGIYIQNIAQGSMDL

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]8.7e-2653.51Show/hide
Query:  EHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTS
        E PLS WK+ I NE+     TL L CKSKDDDLG  NL V Q F W FKENL  TTLYWC    H    HA F VFW EK  WLA RC  R C+W AR  
Subjt:  EHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTS

Query:  GIYIQNIAQGSMDL
        GIY++     + +L
Subjt:  GIYIQNIAQGSMDL

TrEMBL top hitse value%identityAlignment
A0A314XJ22 S-protein homolog6.1e-2542.31Show/hide
Query:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL
        +PC + S   +   +P+++W V + N++ G ++TL  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F+VFW E   K  WL
Subjt:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL

Query:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL
          RCN++ C W+ +  GIYI+N  +   +L
Subjt:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL

A0A5A7UB41 S-protein homolog5.3e-2953.51Show/hide
Query:  LRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCL
        L GSK   P S WKV + N+L  P Q+LT+HCKSKD+DLGEH+L+VG+ F W+FKENL STT +WC+  T         +VFW E+ DWLA RCN+  C+
Subjt:  LRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCL

Query:  WIARTSGIYIQNIA
        W+A+  GIYI N++
Subjt:  WIARTSGIYIQNIA

A0A5E4EKH7 S-protein homolog8.0e-2543.08Show/hide
Query:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL
        +P  + S   +   +P+++W V + N++ G ++TL  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F+VFW E   K  WL
Subjt:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL

Query:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL
          RCN++ C W+A+  GIYI+N  +G  +L
Subjt:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL

A0A6J1C659 S-protein homolog4.7e-2549.58Show/hide
Query:  GSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWI
        GS  + P S W+V I N L G +  LT+HCKSKDDDLGEH ++    + W+FKEN   TTL+WC F +  +  HA  EVFW EK DWLA RC+F  C+W+
Subjt:  GSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWI

Query:  AR-TSGIYIQNIAQGSMDL
        AR   GIY+ ++ Q + +L
Subjt:  AR-TSGIYIQNIAQGSMDL

A0A6J5VTZ1 S-protein homolog6.1e-2542.31Show/hide
Query:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL
        +PC + S   +   +P+++W V + N++ G ++ L  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F+VFW E   K  WL
Subjt:  MPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWRE---KGDWL

Query:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL
          RCN++ C W+A+  GIYI+N  +   +L
Subjt:  ASRCNFRFCLWIARTSGIYIQNIAQGSMDL

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.2e-0840.24Show/hide
Query:  LTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        L +HCKS+DDD G H LQ G  + W F  N +++TLY+C F+   +     F+++   K    +SRC  R C W A+  GIY
Subjt:  LTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

F4JLQ5 S-protein homolog 21.8e-1037.37Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSG
        P S+  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F + P   H+ F+++   +     ++C    C+W  R +G
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSG

F4JLS0 S-protein homolog 12.8e-1942.06Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H    VFW +    L  RC ++ C+W A+T G+Y
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

Query:  IQNIAQG
        + N A G
Subjt:  IQNIAQG

P0DN93 S-protein homolog 291.2e-0945.9Show/hide
Query:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTF
        +P ++  V ++N  + P  TLT+ C+SKDDDLGEH L  GQ+F+W+F+ +   TTL+ C F
Subjt:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTF

Q2HQ46 S-protein homolog 745.9e-1738.32Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H   +VFW +    L  RC+++ C+W A+  G+Y
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

Query:  IQNIAQG
        + N A G
Subjt:  IQNIAQG

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-1137.37Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSG
        P S+  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F + P   H+ F+++   +     ++C    C+W  R +G
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSG

AT4G16295.1 S-protein homologue 12.0e-2042.06Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H    VFW +    L  RC ++ C+W A+T G+Y
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

Query:  IQNIAQG
        + N A G
Subjt:  IQNIAQG

AT4G29035.1 Plant self-incompatibility protein S1 family4.2e-1838.32Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H   +VFW +    L  RC+++ C+W A+  G+Y
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

Query:  IQNIAQG
        + N A G
Subjt:  IQNIAQG

AT5G04347.1 Plant self-incompatibility protein S1 family4.2e-1039.36Show/hide
Query:  ISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY
        + NEL   N+ L + C+SKDD+LG+H L+VGQ     F +N+   TL+WC     P    H  F+ +   +  W A     R+ LWIAR  GIY
Subjt:  ISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIY

AT5G04350.1 Plant self-incompatibility protein S1 family6.9e-1336.89Show/hide
Query:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGDWLASRCNFRFCLWIARTS
        H + + KV +SN+L   ++ L +HC+SKDDDLGEH L++GQ + + F +N+  TT + C  +  P   +H +F  +   +  W  S+     C WI R  
Subjt:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGDWLASRCNFRFCLWIARTS

Query:  GIY
        GIY
Subjt:  GIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGG
TCCTAACCAGACCCTAACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGCTTTGTTTGGGAATTCAAGGAGAATTTGATAT
CAACCACCCTTTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGTGATTGGCTTGCTTCCAGGTGCAATTTT
AGGTTTTGCCTTTGGATTGCTCGGACTTCAGGCATTTATATTCAAAACATTGCTCAAGGTTCTATGGATCTG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGG
TCCTAACCAGACCCTAACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGCTTTGTTTGGGAATTCAAGGAGAATTTGATAT
CAACCACCCTTTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGTGATTGGCTTGCTTCCAGGTGCAATTTT
AGGTTTTGCCTTTGGATTGCTCGGACTTCAGGCATTTATATTCAAAACATTGCTCAAGGTTCTATGGATCTG
Protein sequenceShow/hide protein sequence
MGPIGGGMPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNF
RFCLWIARTSGIYIQNIAQGSMDL