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Lsi01G002020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF584
Genome locationchr01:1890922..1891341
RNA-Seq ExpressionLsi01G002020
SyntenyLsi01G002020
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134921.2 uncharacterized protein LOC101217175 [Cucumis sativus]1.5e-5277.12Show/hide
Query:  MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN-----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE
        MAEEFHESDIIFAD     +RRRRR FHPSLD+AQILLTT     RN+T+DD ++D+D N     NN+KDFAASLPVKIPETVFRYSSDMEEL+EEW+SE
Subjt:  MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN-----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE

Query:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        D NNIVPPHVIIG+R++GKMAFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Subjt:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

XP_008439696.1 PREDICTED: uncharacterized protein LOC103484414 [Cucumis melo]4.2e-5580.39Show/hide
Query:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND------NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE
        MAEEFHESDIIFAD  R+RRRRR FHPSLD+AQILLTT      RN+T+DD+++D+D      +NNNNKDFAASLPVKIPETVFRYSSDMEEL+EEW+SE
Subjt:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND------NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE

Query:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        D NNIVPPHVIIGRRVAGKMAFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Subjt:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

XP_022925703.1 uncharacterized protein LOC111433041 [Cucurbita moschata]1.0e-4574.65Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI
        MAEEFH+SD+I AD     RRLFHPSLDYA  QI +TT R+S        ND N+N+KD AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPH+I
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI

Query:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        IGRRVAGKMAFS+CTGNGRTLKGRDLSQVRNSIL+MTGFLET
Subjt:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

XP_023544879.1 uncharacterized protein LOC111804348 [Cucurbita pepo subsp. pepo]9.3e-4776.06Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI
        MAEEFH+SD+I AD     RRLFHPSLDYA  QIL+TT R+S      ND + N N+KD AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPHVI
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI

Query:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        IGRRVAGKMAFS+CTGNGRTLKGRDLSQVRNSIL+MTGFLET
Subjt:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

XP_038881487.1 uncharacterized protein LOC120073009 [Benincasa hispida]1.5e-5783.8Show/hide
Query:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTRRNSTDD-DDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVI
        MAEEFHESDI+FAD  R++RRR  FHPSLDY QIL+TT  NS ++ +D+ D++NNNNNKDF ASLPVKIPETVFRY+SDMEEL+EEWDSEDNNIVPPHVI
Subjt:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTRRNSTDD-DDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVI

Query:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
Subjt:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

TrEMBL top hitse value%identityAlignment
A0A0A0KNP6 Uncharacterized protein7.2e-5377.12Show/hide
Query:  MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN-----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE
        MAEEFHESDIIFAD     +RRRRR FHPSLD+AQILLTT     RN+T+DD ++D+D N     NN+KDFAASLPVKIPETVFRYSSDMEEL+EEW+SE
Subjt:  MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN-----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE

Query:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        D NNIVPPHVIIG+R++GKMAFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Subjt:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

A0A1S3AZZ7 uncharacterized protein LOC1034844142.0e-5580.39Show/hide
Query:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND------NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE
        MAEEFHESDIIFAD  R+RRRRR FHPSLD+AQILLTT      RN+T+DD+++D+D      +NNNNKDFAASLPVKIPETVFRYSSDMEEL+EEW+SE
Subjt:  MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND------NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSE

Query:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        D NNIVPPHVIIGRRVAGKMAFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Subjt:  D-NNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

A0A6J1EG03 uncharacterized protein LOC1114330415.0e-4674.65Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI
        MAEEFH+SD+I AD     RRLFHPSLDYA  QI +TT R+S        ND N+N+KD AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPH+I
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI

Query:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        IGRRVAGKMAFS+CTGNGRTLKGRDLSQVRNSIL+MTGFLET
Subjt:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

A0A6J1IQW7 uncharacterized protein LOC1114776228.5e-4674.65Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI
        MAEEFH+SD+I AD     R LFHPSLDYA  QIL+TT R+S        ND N+N+KD AASLPVKIPETV+RY SSDMEE++E+WD +D +IVPPHVI
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVI

Query:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        IGRRVAGKMAFS+CTGNGRTLKGRDLSQVRNSILRMTGFLET
Subjt:  IGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

A0A6J1KS02 uncharacterized protein LOC1114971062.3e-4370.5Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGR
        MAEEFHESDIIF+D     RRLFH SLD+ QIL+T  RNS           NNN    A+SLP+KIPETV R++SD EEL+EEWDS+D NIVPPH+II R
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGR

Query:  RVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        R+AGKMAFSVCTGNGRTLKGRDL+ VRNSILRMTGFLET
Subjt:  RVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29640.1 Protein of unknown function, DUF5844.6e-2041.56Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNN-----NKDFAASLPVKIPETVFRYSSDME--------ELEEEWDSE
        M+EEF ES+IIF+D     RR               R +  + ++N   D   N     NK    S    +P  V  +SS +           EEE+  +
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNN-----NKDFAASLPVKIPETVFRYSSDME--------ELEEEWDSE

Query:  D--NNIVPPHVIIGRRV-AGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE
        D    ++PPH+I+GRR+  G+MAFSVCTGNGRTLKGRDLS+VRNS+L++TGFLE
Subjt:  D--NNIVPPHVIIGRRV-AGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE

AT2G34340.1 Protein of unknown function, DUF5846.9e-2443.92Show/hide
Query:  MAEEFHESDIIFAD------RQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEE---LEEEWDSEDNNI
        MAEEF ES+++F+D       +    RLF   ++  +    TRR                    ++SLPV IPE +FR     EE    EEE+      +
Subjt:  MAEEFHESDIIFAD------RQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEE---LEEEWDSEDNNI

Query:  VPPHVIIGRRV-AGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE
        +PPH++IGRR+  G+MAFSVC+G+GRTLKGRDLS+VRNS+LR+TGFLE
Subjt:  VPPHVIIGRRV-AGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE

AT4G18980.1 AtS40-37.2e-1338.57Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIP-ETVFRYSSDMEELEEEWDSEDNNIVPPHVII-
        M+EEF ES++IF+D                     TR+++    +N + +  +  KD  +S PV+IP  T  RY+            E+  + PPHVII 
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIP-ETVFRYSSDMEELEEEWDSEDNNIVPPHVII-

Query:  GRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE
         RR   +MAFS C     TLKGRDLS+ RN++LRMTGFLE
Subjt:  GRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE

AT4G21970.1 Protein of unknown function, DUF5846.1e-1242.05Show/hide
Query:  ASLPVKIPE--TVFRYS-SDMEELEEEW---DSEDNNIVPPHVIIGRRVAGKM--AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET
        +S P+ IP+   V+ YS  +       W   D ++ ++VPPH ++ +R+A     +FS+C G GRTLKGRDLS+ RN++L  TGFLE+
Subjt:  ASLPVKIPE--TVFRYS-SDMEELEEEW---DSEDNNIVPPHVIIGRRVAGKM--AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

AT5G45630.1 Protein of unknown function, DUF5841.2e-1539.29Show/hide
Query:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDS--EDNNIVPPHVII
        M+EEF ESDIIF+D+              ++I  ++R     +  N++      ++    + PV+IP   FR          EWD+  E+++  PPHVII
Subjt:  MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDS--EDNNIVPPHVII

Query:  GRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE
         RR+  ++AFS C     TLKGRDLS+ RNS+LRMTGFLE
Subjt:  GRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGAATTCCACGAATCCGACATCATATTCGCCGACCGCCAACGTCGCCGCCGCCGCCTTTTCCATCCTTCACTCGACTACGCCCAAATCCTCCTCACAACGCG
TCGGAACTCCACCGACGACGACGATAACAACGACAACGACAACAACAACAACAACAAAGATTTCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACA
GTTCCGACATGGAGGAGCTGGAAGAGGAATGGGACAGTGAAGACAACAACATAGTACCGCCACACGTCATCATAGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTC
TGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAGAATTCCACGAATCCGACATCATATTCGCCGACCGCCAACGTCGCCGCCGCCGCCTTTTCCATCCTTCACTCGACTACGCCCAAATCCTCCTCACAACGCG
TCGGAACTCCACCGACGACGACGATAACAACGACAACGACAACAACAACAACAACAAAGATTTCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACA
GTTCCGACATGGAGGAGCTGGAAGAGGAATGGGACAGTGAAGACAACAACATAGTACCGCCACACGTCATCATAGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTC
TGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA
Protein sequenceShow/hide protein sequence
MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSV
CTGNGRTLKGRDLSQVRNSILRMTGFLET