CuGenDBv2

Gene ID	Lsi01G002150
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	aquaporin NIP1-1-like
Genome location	chr01:1970376..1972483
RNA-Seq Expression	Lsi01G002150
Synteny	Lsi01G002150
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134594.2 aquaporin NIP1-1 [Cucumis sativus]

5.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

XP_022142087.1 aquaporin NIP1-1-like [Momordica charantia]

3.5e-09

57.89

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Query:  SKLLDGCLPVHMNLVR-HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        S L  G L +  N  + HF GTLP D YLQ FV+EFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  SKLLDGCLPVHMNLVR-HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

XP_022142207.1 aquaporin NIP1-1-like [Momordica charantia]

5.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

XP_022926568.1 aquaporin NIP1-2-like [Cucurbita moschata]

5.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

XP_023518200.1 aquaporin NIP1-2-like [Cucurbita pepo subsp. pepo]

5.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNN7 Uncharacterized protein

2.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

A0A5D3CP82 Aquaporin NIP1-1

2.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

A0A6J1CLN4 aquaporin NIP1-1-like

1.7e-09

57.89

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Query:  SKLLDGCLPVHMNLVR-HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        S L  G L +  N  + HF GTLP D YLQ FV+EFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  SKLLDGCLPVHMNLVR-HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

A0A6J1KSG1 aquaporin NIP1-1-like

2.9e-09

66.1

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D Y+Q FVIEFII F          TDNRAIGEL GLA GATV LNVM+AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

E5GC22 Aquaporin

2.9e-09

67.8

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP D YLQ FVIEFII F          TDNRAIGEL GLA GATV LNVM AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

SwissProt top hits

e value

%identity

Alignment

P08995 Nodulin-26

4.9e-06

48.28

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Query:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        F GT+P    LQ FV EFI+ F          TDNRA+GE  G+A G+T+ LNV+I G
Subjt:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

Q0DK16 Aquaporin NIP1-3

2.2e-06

52.54

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GT P    +Q   +EFII F          TDNRAIGEL GLA GATV +NV+ AG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

Q40746 Aquaporin NIP1-1

2.3e-08

57.63

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Query:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP    +Q  V+EFII F          TDNRAIGEL GLA GAT+ LNV+IAG
Subjt:  HFRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

Q8LFP7 Aquaporin NIP1-2

2.3e-08

62.07

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Query:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        F GTLP    LQ FVIEFII F          TDNRAIGEL GLA G+TV LNV+IAG
Subjt:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

Q9ATN4 Aquaporin NIP1-1

2.0e-07

55.93

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Query:  HFRGTLPRDLYLQIFVIE--------FIIIFTCTDNRAIGELTGLAAGATVPLNVMIAG
        HF GTLP    +Q  VIE        F+I    TDNRAIGEL GLA GAT+ LNV+IAG
Subjt:  HFRGTLPRDLYLQIFVIE--------FIIIFTCTDNRAIGELTGLAAGATVPLNVMIAG

Arabidopsis top hits

e value

%identity

Alignment

AT1G80760.1 NOD26-like intrinsic protein 6;1

1.1e-05

49.09

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Query:  TLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        T+P     Q F +EFII F          TD RA+GEL G+A GATV LN++IAG
Subjt:  TLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

AT4G10380.1 NOD26-like intrinsic protein 5;1

8.6e-06

47.27

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Query:  TLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        T+P     Q F +EFII F          TD RA+GEL G+A GATV LN+++AG
Subjt:  TLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

AT4G18910.1 NOD26-like intrinsic protein 1;2

1.7e-09

62.07

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Query:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        F GTLP    LQ FVIEFII F          TDNRAIGEL GLA G+TV LNV+IAG
Subjt:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

AT4G19030.1 NOD26-like major intrinsic protein 1

1.7e-06

52.63

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Query:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIA
        F G+ P    LQ F +EFI+ F          TDNRAIGEL GLA G+TV LNV+IA
Subjt:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIA

AT5G37810.1 NOD26-like intrinsic protein 4;1

1.9e-05

44.83

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Query:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG
        F GT P D   +  V E II F          TDNRA+GEL G+A G T+ +NV +AG
Subjt:  FRGTLPRDLYLQIFVIEFIIIF--------TCTDNRAIGELTGLAAGATVPLNVMIAG

Sequences

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CDS sequence

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ATGTCGGGAGTCACGAGCAAAACTAAGAATAAGGCACATCTGGATAAGGATAAGTCCAAACTTCTTGACGGTTGCCTGCCAGTTCACATGAATCTTGTTCGTCACTTTCG
AGGAACTCTCCCACGTGACTTATATCTGCAGATCTTTGTGATTGAATTCATAATCATATTTACCTGCACTGACAACAGAGCCATTGGTGAACTTACTGGACTCGCTGCCG
GTGCTACTGTACCTCTCAATGTGATGATTGCAGGAAGCAACTTCAGATGCGTTAGTCTAGAATACCATCAAAAGGAGGAAATTTCGTTGGGCCACCAATCAAAACGACCT
TTTCATTGTACTTCAGAATTAAATGTAGATGTGTCTCCAACTACCAAATTGTTCTACTTCAATGTTATCAAAACATATGGAATTGAACAAGGATTTAAATTCACTAGTTG
GTGTTGGGACATGAGAGAAACTAAGAATGCCATGTCAACGATGCACAGGTTAACTTGCTTCAAGTTACCACAAGACATTGCTCTTCAAATTGTTCATGCTGAGTTGAAAT
AG

mRNA sequence

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Protein sequence

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MSGVTSKTKNKAHLDKDKSKLLDGCLPVHMNLVRHFRGTLPRDLYLQIFVIEFIIIFTCTDNRAIGELTGLAAGATVPLNVMIAGSNFRCVSLEYHQKEEISLGHQSKRP
FHCTSELNVDVSPTTKLFYFNVIKTYGIEQGFKFTSWCWDMRETKNAMSTMHRLTCFKLPQDIALQIVHAELK

Lsi01G002150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome