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Lsi01G002280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor bHLH35-like protein
Genome locationchr01:2078299..2079380
RNA-Seq ExpressionLsi01G002280
SyntenyLsi01G002280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052608.1 uncharacterized protein E6C27_scaffold120G002160 [Cucumis melo var. makuwa]6.7e-7989.66Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQ CVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED HQL+N+SDIT+AINVAID KLLA NQHH DIP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

XP_004134653.1 uncharacterized protein LOC101213083 [Cucumis sativus]5.7e-7889.71Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQRCVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKD-IPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAED HQL+N+SDITEAINVAID KLLA NQHH D IP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKD-IPQNDAEI

XP_008439723.1 PREDICTED: uncharacterized protein LOC103484437 [Cucumis melo]6.7e-7989.66Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQ CVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED HQL+N+SDIT+AINVAID KLLA NQHH DIP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

XP_023544520.1 uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]1.1e-6878.61Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVST QKRFDSR KLRLVRSL TY+SSG+Q   FWNAVLF+HKLKLKLEA+EREYSNLL+ KREYLNS+KQ HAPKEVKVEK GEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        V+VLEAF+KMGLNV++A+VSC+ECF MEAIAVAED Q +N+SDITEAIN AI+GK LAANQ  K+ P+ D EI
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

XP_038893157.1 uncharacterized protein LOC120082020 [Benincasa hispida]1.5e-8392.49Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLATYESS +QRC+FWNAVLFIHKLKLKLEA+EREYSNLLA KREYLNSIKQFH+PKEVKVEKNGEEF+VKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAE+H+L+NVSDITEAINVAIDGKLLA NQHHKDIP+NDAEI
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

TrEMBL top hitse value%identityAlignment
A0A0A0KHW9 Uncharacterized protein2.8e-7889.71Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQRCVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKD-IPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAED HQL+N+SDITEAINVAID KLLA NQHH D IP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKD-IPQNDAEI

A0A1S3B049 uncharacterized protein LOC1034844373.3e-7989.66Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQ CVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED HQL+N+SDIT+AINVAID KLLA NQHH DIP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

A0A5A7UBN8 Uncharacterized protein3.3e-7989.66Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQ CVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED HQL+N+SDIT+AINVAID KLLA NQHH DIP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

A0A6J1IR65 uncharacterized protein LOC1114786316.8e-6978.61Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVST QKRFDSR KLRLVRSL TY+SSG+Q   FWNAVLF+HKLKLKLEA+EREYSNLL+ KREYLNS+KQ HAPKEVKVEK GEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        V+VLEAF+KMGLNV++A+VSC+ECF MEAIAVAED Q +N+ DITEAIN AIDGK LAANQ  K+ P+ D EI
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

E5GC31 Uncharacterized protein3.3e-7989.66Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESSGRQ CVFWNAVLFIHKLKLKLEA+EREYSNLL  KREYLNSIKQFH+ KEVKVEKNGEEFRVKV+CEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI
        VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED HQL+N+SDIT+AINVAID KLLA NQHH DIP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein1.9e-2342.86Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYE-SSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDR
        MV++ QK+  S+ K   +++L  ++ S   Q  V   A+L+I  LKL++EA++REY +L  TK+E L      H  +EVKVEK GE F+VK+K  +G + 
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYE-SSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDR

Query:  LVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAI
        LV++LEAFE+MGLNV +AR SC + F MEAI   +   +L +V D+T+ +  A+
Subjt:  LVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAED-HQLINVSDITEAINVAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)6.0e-0933.77Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKG-GDR
        MVS  QKR   + K +L+RS+ T   +     +  +A  +I KLK K+E   ++         E  +S         V VE   + F + V   K     
Subjt:  MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKG-GDR

Query:  LVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVA-EDHQLINVSDITEAINVAI
        LVSVLEAFE +GLNV+EAR SCT+ F + A+ +  ED + ++   + +A+  AI
Subjt:  LVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVA-EDHQLINVSDITEAINVAI

AT3G56220.1 transcription regulators4.6e-0936.31Show/hide
Query:  MVSTLQKRFDS-RNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKE-VKVEKNGEEFRVKVKCEKG-G
        MVS   KR  S R K  L+RS+ T   +  +  +  +A  +I KLK K+E +        AT  E   S ++   P   V VE   + F +KV   K   
Subjt:  MVSTLQKRFDS-RNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKE-VKVEKNGEEFRVKVKCEKG-G

Query:  DRLVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVA--EDHQLINVSDITEAINVAI
          LV VLE FE +GL+VVEARVSCT+ F + AI  +  +D   I+   + +A+  AI
Subjt:  DRLVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVA--EDHQLINVSDITEAINVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTACATTACAAAAGAGATTCGACTCACGAAACAAGCTACGCCTTGTTCGATCTCTGGCCACCTATGAATCCTCTGGAAGACAGAGGTGTGTGTTCTGGAATGC
TGTTCTCTTCATCCATAAGCTTAAACTCAAGCTGGAAGCAGTTGAGAGAGAGTATTCAAATCTATTGGCCACGAAAAGAGAATACTTGAACTCAATAAAGCAATTTCATG
CCCCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGAGTGAAAGTGAAATGCGAAAAGGGAGGAGACAGATTAGTTTCAGTACTAGAGGCATTTGAGAAAATG
GGTCTTAATGTTGTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCATTGCTGTAGCTGAAGATCATCAATTGATTAATGTCAGTGATATAACTGAAGC
TATTAATGTAGCCATTGATGGCAAATTATTAGCTGCAAATCAGCATCACAAAGACATTCCTCAGAATGATGCTGAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATTAAATATTACATAAGTTTACACAGATGGGGTTCCTCAGTTTTTAAATTCACATGAGAACAAGAGAGAAAATAGCTGAGTGATTGTTTCAATTTCGCCTTTAAAAACAC
ACACAGAGAGCAACTTTTTTATGCTATAAAAAGCCAGACCCTTCATTTCAGGTCCTATTCTTCACTAACTTTTCTTAATTGTGGAGCAAGTTCAAGCTGAGAGACAACCA
AAGAGACAGAGATGGTTTCTACATTACAAAAGAGATTCGACTCACGAAACAAGCTACGCCTTGTTCGATCTCTGGCCACCTATGAATCCTCTGGAAGACAGAGGTGTGTG
TTCTGGAATGCTGTTCTCTTCATCCATAAGCTTAAACTCAAGCTGGAAGCAGTTGAGAGAGAGTATTCAAATCTATTGGCCACGAAAAGAGAATACTTGAACTCAATAAA
GCAATTTCATGCCCCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGAGTGAAAGTGAAATGCGAAAAGGGAGGAGACAGATTAGTTTCAGTACTAGAGGCAT
TTGAGAAAATGGGTCTTAATGTTGTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCATTGCTGTAGCTGAAGATCATCAATTGATTAATGTCAGTGAT
ATAACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATTAGCTGCAAATCAGCATCACAAAGACATTCCTCAGAATGATGCTGAAATTTAGCCACTTGCTAACCTATC
AATTGAATGAAAATGTTTCTTGCTATTCCATTCTCTTGTATTTTTCTTTCTTTCTATCTAATTCTAATTTGT
Protein sequenceShow/hide protein sequence
MVSTLQKRFDSRNKLRLVRSLATYESSGRQRCVFWNAVLFIHKLKLKLEAVEREYSNLLATKREYLNSIKQFHAPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKM
GLNVVEARVSCTECFCMEAIAVAEDHQLINVSDITEAINVAIDGKLLAANQHHKDIPQNDAEI