; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G002380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:2170404..2172664
RNA-Seq ExpressionLsi01G002380
SyntenyLsi01G002380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KCW74110.1 hypothetical protein EUGRSUZ_E02750 [Eucalyptus grandis]1.7e-0650Show/hide
Query:  MLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGA
        MLP INKLIP+   ++  +KH H+ +  EF V+I+ P++ IL HVIPQ   H+VGA
Subjt:  MLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGA
RCV04687.1 hypothetical protein SETIT_1G020900v2 [Setaria italica]8.6e-0640Show/hide
Query:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
        L GS + P  P ++ L+P+ AGKQ ++KH H+ S  E  V+++   + +L  V+P  D H+VGAG
Subjt:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
TKW37032.1 hypothetical protein SEVIR_1G021000v2 [Setaria viridis]9.5e-0538.46Show/hide
Query:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
        L GS + P  P ++ L+P+ AGKQ ++K  H+ S  E  V+++   + +L  V+P  D H+VGAG
Subjt:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
TrEMBL top hitse value%identityAlignment
A0A059C845 Uncharacterized protein8.4e-0750Show/hide
Query:  MLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGA
        MLP INKLIP+   ++  +KH H+ +  EF V+I+ P++ IL HVIPQ   H+VGA
Subjt:  MLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGA
A0A368PFX7 Uncharacterized protein4.2e-0640Show/hide
Query:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
        L GS + P  P ++ L+P+ AGKQ ++KH H+ S  E  V+++   + +L  V+P  D H+VGAG
Subjt:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
A0A4U6W4N3 Uncharacterized protein4.6e-0538.46Show/hide
Query:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
        L GS + P  P ++ L+P+ AGKQ ++K  H+ S  E  V+++   + +L  V+P  D H+VGAG
Subjt:  LGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAGACACTGTCTAAGAATCAAGATGAGTACCATTCTGGATTCAAATACACAGTGCGGTTGCAGGCTTTTCTACATCGTACATCTACAGTTCGCAAGTTTTGTAT
GCGTGCATTGGAAATACCAACTTTCCAAGCATGGACTTATCTACTAATCACAACTATACAACACACAGATACATTAGAGCAGATAGATAAAGGCATCAGGAATAAGGTGC
TGCGATTTCAAATTACCGTCTTTATCCTTATTGAAAACCAGTACATAACCGCATACATGGCTGAAAGGGGTGAACATTCATTCCAGGGAAATCATCTCAAGCATTTATTC
AAGTGGGTTTCTCTGGCAGAATCATTTGAAAAAAAAAACGTACAGAGACAACATAGAAGACTAGGGGGCTCTCGGGTCCGTCCCATGCTGCCATACATAAACAAGCTCAT
CCCATCCAGTGCTGGCAAGCAGGCCCTCAACAAGCACACTCATATCTATTCCTACGGCGAATTCAGTGTGATGATCATATCTCCCAACAAGAGCATCCTCCAACATGTAA
TCCCACAAACAGACAGTCATATCGTAGGAGCAGGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAGACACTGTCTAAGAATCAAGATGAGTACCATTCTGGATTCAAATACACAGTGCGGTTGCAGGCTTTTCTACATCGTACATCTACAGTTCGCAAGTTTTGTAT
GCGTGCATTGGAAATACCAACTTTCCAAGCATGGACTTATCTACTAATCACAACTATACAACACACAGATACATTAGAGCAGATAGATAAAGGCATCAGGAATAAGGTGC
TGCGATTTCAAATTACCGTCTTTATCCTTATTGAAAACCAGTACATAACCGCATACATGGCTGAAAGGGGTGAACATTCATTCCAGGGAAATCATCTCAAGCATTTATTC
AAGTGGGTTTCTCTGGCAGAATCATTTGAAAAAAAAAACGTACAGAGACAACATAGAAGACTAGGGGGCTCTCGGGTCCGTCCCATGCTGCCATACATAAACAAGCTCAT
CCCATCCAGTGCTGGCAAGCAGGCCCTCAACAAGCACACTCATATCTATTCCTACGGCGAATTCAGTGTGATGATCATATCTCCCAACAAGAGCATCCTCCAACATGTAA
TCCCACAAACAGACAGTCATATCGTAGGAGCAGGAGGCTAA
Protein sequenceShow/hide protein sequence
MVQTLSKNQDEYHSGFKYTVRLQAFLHRTSTVRKFCMRALEIPTFQAWTYLLITTIQHTDTLEQIDKGIRNKVLRFQITVFILIENQYITAYMAERGEHSFQGNHLKHLF
KWVSLAESFEKKNVQRQHRRLGGSRVRPMLPYINKLIPSSAGKQALNKHTHIYSYGEFSVMIISPNKSILQHVIPQTDSHIVGAGG