; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G002480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:2251268..2253395
RNA-Seq ExpressionLsi01G002480
SyntenyLsi01G002480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022925761.1 uncharacterized protein LOC111433073 isoform X1 [Cucurbita moschata]7.6e-6970.19Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGLDW  NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ+VCG  +IENKNAK NIS P+RKQSQK NAIT+EI+K  PST QND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

XP_022925762.1 uncharacterized protein LOC111433073 isoform X2 [Cucurbita moschata]2.3e-6569.23Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGLDW  NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ      KIENKNAK NIS P+RKQSQK NAIT+EI+K  PST QND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

XP_023544557.1 uncharacterized protein LOC111804099 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-7071.15Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGL+WF NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ+VCGA +IENKNAK NIS P+RKQSQK NAIT+EI+K  PSTIQND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

XP_023544558.1 uncharacterized protein LOC111804099 isoform X2 [Cucurbita pepo subsp. pepo]2.1e-6669.71Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGL+WF NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ      KIENKNAK NIS P+RKQSQK NAIT+EI+K  PSTIQND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

XP_038883790.1 uncharacterized protein LOC120074664 isoform X1 [Benincasa hispida]4.3e-6477.78Show/hide
Query:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSS
        MGQNSNGLDWF NVFKKME  CLEM  VLEKE+LKYV  QPNSVGI EDHF QPHLDVGE+QSP  EHWANQNASSA A GK+  +H +KTE RVTIQSS
Subjt:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSS

Query:  DKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII
        DKQNHPIIEPNHFSA QEVCGALKIEN           +KQSQKANAITEEI+KF PSTIQ DEFPDWEII
Subjt:  DKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII

TrEMBL top hitse value%identityAlignment
A0A0A0KKC6 Uncharacterized protein4.1e-6075.44Show/hide
Query:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSS
        MGQNSNGLDWF NVF KME  CLEM  VLEKE LKY   QPNSVG  EDHF  PHL +GEDQSPEKEHWANQ+ASSAGAL K+  +H V   D+  IQSS
Subjt:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSS

Query:  DKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII
        DKQNHP IE NHFSANQEVCGALKIENKN K NISRP+RKQSQKA    +EI+KF PSTIQNDEF DWEII
Subjt:  DKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII

A0A5A7UFX4 Uncharacterized protein6.1e-2474.7Show/hide
Query:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKS
        M QNSNGLDWF NVF KME  CLEM  VLEKE+LKY  RQPNSVG  EDHF QPHL +GEDQSPEKEH ANQ+A SAGAL ++
Subjt:  MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKS

A0A6J1ECJ4 uncharacterized protein LOC111433073 isoform X21.1e-6569.23Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGLDW  NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ      KIENKNAK NIS P+RKQSQK NAIT+EI+K  PST QND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

A0A6J1ED31 uncharacterized protein LOC111433073 isoform X13.7e-6970.19Show/hide
Query:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS
        +KF N  L H   F      ++ L   C QFSFLHLNMGQNSNGLDW  NVFKKMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQS
Subjt:  MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQS

Query:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND
        PEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSANQ+VCG  +IENKNAK NIS P+RKQSQK NAIT+EI+K  PST QND
Subjt:  PEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQND

Query:  EFPDWEII
        EFPDWEI+
Subjt:  EFPDWEII

A0A6J1EG60 uncharacterized protein LOC111433073 isoform X32.6e-5474.36Show/hide
Query:  KKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSA
        +KMED CLEM  VLEKEVLKYV  Q NSV I EDHF QP LDVGEDQSPEK + ANQNASS+ A G  PG+H VKTED  TIQ+S KQNH IIEPNHFSA
Subjt:  KKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSA

Query:  NQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII
        NQ+VCG  +IENKNAK NIS P+RKQSQK NAIT+EI+K  PST QNDEFPDWEI+
Subjt:  NQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31130.1 unknown protein1.1e-0443.59Show/hide
Query:  GLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVG
        G+ W GNV++K E MCLE+  ++ ++  KYV  Q  +VG
Subjt:  GLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTAGTAATGGTAGACTCGGGCACTCAATCAACTTCATGATTTTACTTCTAACTTCACTACTGCTTCCAAATTCTTGCAATCAGTTTTCTTTTCTTCATCTGAA
CATGGGGCAAAACTCTAATGGCTTGGACTGGTTTGGGAATGTCTTCAAGAAAATGGAGGACATGTGCTTGGAGATGCGTGCTGTCTTGGAGAAGGAAGTGTTGAAATATG
TAAACAGGCAACCAAATTCGGTTGGTATTTATGAAGATCACTTCCATCAGCCACATTTGGATGTTGGAGAAGATCAGTCTCCTGAGAAGGAGCATTGGGCAAATCAAAAT
GCATCTTCTGCAGGTGCTCTTGGTAAATCTCCAGGGCAGCATCCTGTCAAGACAGAAGATCGAGTTACAATTCAATCATCTGACAAACAGAATCATCCTATTATTGAACC
AAACCATTTCTCAGCTAACCAAGAAGTATGTGGAGCTCTCAAGATTGAAAACAAGAATGCTAAAGTGAATATATCAAGGCCAGCAAGGAAGCAGAGCCAAAAAGCAAATG
CAATTACCGAAGAAATAATAAAGTTTCCTCCATCCACCATTCAAAATGATGAATTCCCCGACTGGGAGATTATTTAG
mRNA sequenceShow/hide mRNA sequence
CTCACTGCCAAGGCTTTCTCTCCCACTATTTTCTCTCCCATCCTTCTAAGAATATGAAACTTAAAAGTGATCCCTTTTTATGAAGTTTAGTAATGGTAGACTCGGGCACT
CAATCAACTTCATGATTTTACTTCTAACTTCACTACTGCTTCCAAATTCTTGCAATCAGTTTTCTTTTCTTCATCTGAACATGGGGCAAAACTCTAATGGCTTGGACTGG
TTTGGGAATGTCTTCAAGAAAATGGAGGACATGTGCTTGGAGATGCGTGCTGTCTTGGAGAAGGAAGTGTTGAAATATGTAAACAGGCAACCAAATTCGGTTGGTATTTA
TGAAGATCACTTCCATCAGCCACATTTGGATGTTGGAGAAGATCAGTCTCCTGAGAAGGAGCATTGGGCAAATCAAAATGCATCTTCTGCAGGTGCTCTTGGTAAATCTC
CAGGGCAGCATCCTGTCAAGACAGAAGATCGAGTTACAATTCAATCATCTGACAAACAGAATCATCCTATTATTGAACCAAACCATTTCTCAGCTAACCAAGAAGTATGT
GGAGCTCTCAAGATTGAAAACAAGAATGCTAAAGTGAATATATCAAGGCCAGCAAGGAAGCAGAGCCAAAAAGCAAATGCAATTACCGAAGAAATAATAAAGTTTCCTCC
ATCCACCATTCAAAATGATGAATTCCCCGACTGGGAGATTATTTAGATCTATATATTGCTTTCCTTCTAAAAGCACAGGTAGTGCACACAAGGCAATAAAATTCATGTAA
TCCTCTAAAGATTTATCCTGCAATGCTACGCTAGTCACTTTGTTGCTTTCACTATTTTCCAGTTTTCTCTGCCTATTAGCAATCACCAAGATTGAAGGGATTTAGTTTT
Protein sequenceShow/hide protein sequence
MKFSNGRLGHSINFMILLLTSLLLPNSCNQFSFLHLNMGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQN
ASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII