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Lsi01G002600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:2341139..2341345
RNA-Seq ExpressionLsi01G002600
SyntenyLsi01G002600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052636.1 hypothetical protein E6C27_scaffold120G002460 [Cucumis melo var. makuwa]1.3e-1466.18Show/hide
Query:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        +LLASYCF GS SR L+PK A   +RPALLGS+D+FHI L+A E S  +I +R VAR SPGGPDPRHH
Subjt:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

KAE8647711.1 hypothetical protein Csa_003452 [Cucumis sativus]5.3e-1165.52Show/hide
Query:  SVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        S SRQL+PK A + +RPALLGS+D+FHI ++A E S G+I +R VAR SPGGPDPRHH
Subjt:  SVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

KAE8647712.1 hypothetical protein Csa_003203 [Cucumis sativus]2.1e-1260.87Show/hide
Query:  MLLASYCFVGSVSRQLQ-PKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        +LLASY F  S SR LQ   F  + Y+PALLGSK +F +AL+A  +  GTIH+RE ARQSPGGPDP HH
Subjt:  MLLASYCFVGSVSRQLQ-PKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

KAG6581347.1 hypothetical protein SDJN03_21349, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1059.09Show/hide
Query:  FVGSVSRQL-----QPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        F G+ SR+L     +P    + YRPALLGSK++FHI L+A E S G+IH+R VAR SPGGPDPRHH
Subjt:  FVGSVSRQL-----QPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

TrEMBL top hitse value%identityAlignment
A0A0A0KLM5 Uncharacterized protein1.0e-1260.87Show/hide
Query:  MLLASYCFVGSVSRQLQ-PKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        +LLASY F  S SR LQ   F  + Y+PALLGSK +F +AL+A  +  GTIH+RE ARQSPGGPDP HH
Subjt:  MLLASYCFVGSVSRQLQ-PKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

A0A0A0KNI4 Uncharacterized protein4.5e-1666.18Show/hide
Query:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        +L+ASYCF GS SRQL+PK A + +RPALLGS+D+FHI ++A E S G+I +R VAR SPGGPDPRHH
Subjt:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

A0A5A7UEP5 Uncharacterized protein6.5e-1566.18Show/hide
Query:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH
        +LLASYCF GS SR L+PK A   +RPALLGS+D+FHI L+A E S  +I +R VAR SPGGPDPRHH
Subjt:  MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTGGCCTCCTACTGTTTTGTCGGCTCTGTTTCTCGACAACTTCAACCAAAATTTGCGACTGAGTTATATCGCCCAGCGCTGTTGGGTTCCAAAGACAGCTTTCA
CATTGCCCTGATCGCCGACGAAGACTCGGCCGGAACCATTCATAAACGAGAGGTGGCGCGTCAGTCACCGGGAGGCCCTGATCCCCGCCACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTGGCCTCCTACTGTTTTGTCGGCTCTGTTTCTCGACAACTTCAACCAAAATTTGCGACTGAGTTATATCGCCCAGCGCTGTTGGGTTCCAAAGACAGCTTTCA
CATTGCCCTGATCGCCGACGAAGACTCGGCCGGAACCATTCATAAACGAGAGGTGGCGCGTCAGTCACCGGGAGGCCCTGATCCCCGCCACCACTAA
Protein sequenceShow/hide protein sequence
MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH