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Lsi01G002610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:2343848..2345876
RNA-Seq ExpressionLsi01G002610
SyntenyLsi01G002610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052636.1 hypothetical protein E6C27_scaffold120G002460 [Cucumis melo var. makuwa]3.6e-1677.59Show/hide
Query:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
        GS+SR L+P  AA S+RPALLGS+DNFHI LVAVE S +I QRGVARLSPGGPDPRHH
Subjt:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
KAE8647711.1 hypothetical protein Csa_003452 [Cucumis sativus]2.8e-1677.19Show/hide
Query:  SDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
        S+SR L+P  AA S+RPALLGS+DNFHI +VAVE SG+I QRGVARLSPGGPDPRHH
Subjt:  SDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
KAE8647712.1 hypothetical protein Csa_003203 [Cucumis sativus]1.1e-0967.8Show/hide
Query:  SDSRPLQ-PNFAAMSYRPALLGSKDNFHIALVA-VEDSGNIRQRGVARLSPGGPDPRHH
        S+SR LQ  +F A SY+PALLGSK NF +ALVA VED G I QR  AR SPGGPDP HH
Subjt:  SDSRPLQ-PNFAAMSYRPALLGSKDNFHIALVA-VEDSGNIRQRGVARLSPGGPDPRHH
KAG6581347.1 hypothetical protein SDJN03_21349, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1673.02Show/hide
Query:  GSDSRPL-----QPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
        G+DSR L     +PN  A +YRPALLGSK+NFHI LVAVE SG+I QRGVARLSPGGPDPRHH
Subjt:  GSDSRPL-----QPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0KLM5 Uncharacterized protein5.4e-1067.8Show/hide
Query:  SDSRPLQ-PNFAAMSYRPALLGSKDNFHIALVA-VEDSGNIRQRGVARLSPGGPDPRHH
        S+SR LQ  +F A SY+PALLGSK NF +ALVA VED G I QR  AR SPGGPDP HH
Subjt:  SDSRPLQ-PNFAAMSYRPALLGSKDNFHIALVA-VEDSGNIRQRGVARLSPGGPDPRHH
A0A0A0KNI4 Uncharacterized protein2.1e-1777.59Show/hide
Query:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
        GS+SR L+P  AA S+RPALLGS+DNFHI +VAVE SG+I QRGVARLSPGGPDPRHH
Subjt:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
A0A5A7UEP5 Uncharacterized protein1.7e-1677.59Show/hide
Query:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
        GS+SR L+P  AA S+RPALLGS+DNFHI LVAVE S +I QRGVARLSPGGPDPRHH
Subjt:  GSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGATTCTCGACCACTTCAACCAAACTTTGCGGCTATGTCATATCGGCCAGCGCTGTTGGGTTCCAAAGACAACTTTCACATTGCGCTGGTCGCCGTCGAAGA
CTCAGGAAACATTCGTCAACGTGGGGTGGCGCGCCTGTCACCAGGAGGCCCTGATCCCCGCCACCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCTGATTCTCGACCACTTCAACCAAACTTTGCGGCTATGTCATATCGGCCAGCGCTGTTGGGTTCCAAAGACAACTTTCACATTGCGCTGGTCGCCGTCGAAGA
CTCAGGAAACATTCGTCAACGTGGGGTGGCGCGCCTGTCACCAGGAGGCCCTGATCCCCGCCACCATTAATCTTCAGAATCCTTCCCCATGTGTGTGCTGTAAGAGAAGT
TAGTCGAGCAAGCTCGAACTCTGTTTGAACCGTTTGATGTAGGAGTCTGGAACTAAAAATTGTGATTTCACGATGAATAAGTTTTCGTCTTTTTGACAGTAATGGCAAGT
TCTATTTTTTTTCTTCTCA
Protein sequenceShow/hide protein sequence
MGSDSRPLQPNFAAMSYRPALLGSKDNFHIALVAVEDSGNIRQRGVARLSPGGPDPRHH