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Lsi01G002950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G002950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:2629639..2630889
RNA-Seq ExpressionLsi01G002950
SyntenyLsi01G002950
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439814.1 PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo]1.3e-5177.18Show/hide
Query:  MLNQTD---HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEET
        M NQ+D   HQ+LLNGWPLGLQVMNT LR+MAD G  RL  TDPSPD+ IPS SFSSLSSSELDTLSTASFFQDHSVSLGRLIGL+P DK WLY PTEE 
Subjt:  MLNQTD---HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEET

Query:  QSVAVNSAG-LDVSKTNSAENEISGR-ICIPIVIGMILKMIRSRRNSRS
        +SV  NSAG +D SKT + E+EISGR ICIPIVIG+ILKMIRSRRNS S
Subjt:  QSVAVNSAG-LDVSKTNSAENEISGR-ICIPIVIGMILKMIRSRRNSRS
XP_011658225.1 uncharacterized protein LOC105435964 [Cucumis sativus]2.5e-5076.87Show/hide
Query:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSV
        M NQ+DHQ+LLNGWPLGLQVMN+ LR+MAD G   L    PSP+L IPS SFSSLSSSELDTLSTASFFQD SVSLGRLIGL+P DKTWLYFPTEE +SV
Subjt:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSV

Query:  AVNSAG--LDVSKT-NSAENE-ISGRICIPIVIGMILKMIRSRRNSR
        + NSAG  +D SKT N+ E+E ISGRICIPIVIG+ILKMIRSRRNSR
Subjt:  AVNSAG--LDVSKT-NSAENE-ISGRICIPIVIGMILKMIRSRRNSR
XP_022926836.1 uncharacterized protein LOC111433832 [Cucurbita moschata]1.3e-4673.57Show/hide
Query:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS
        ++ ++++NGWPLGL+VMNTR+R MAD    RL PTDP P  HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIG+RP DKTWLY PT+E   V+VNS
Subjt:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS

Query:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        A LD  KT SA  EISGRICIPI+IG++LKMIRSRRNSRS
Subjt:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
XP_023517383.1 uncharacterized protein LOC111781162 [Cucurbita pepo subsp. pepo]3.3e-4775Show/hide
Query:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS
        ++ Q++LNGWPLGL+VMNTR+R MAD    RL PTDP P  HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIG+RP DKTWLY PT+E   V+VNS
Subjt:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS

Query:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        A LD  KT SA  EISGRICIPI+IG++LKMIRSRRNSRS
Subjt:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
XP_038883341.1 uncharacterized protein At3g17950-like [Benincasa hispida]1.1e-6186.99Show/hide
Query:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRL--SPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQ
        MLN TDHQ++LNGWPLGLQVMNTRLRIMA  G +RL   PTD S DLHIPS+SFSSLSSSELDTLSTASFFQDHSVSLGRLIGL+P DKTWLYFPTEETQ
Subjt:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRL--SPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQ

Query:  SVAVNSAGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        SV+VNSAGLD SKTN+AENEISGRICIPIVIG+ILKMIRSRRNSRS
Subjt:  SVAVNSAGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
TrEMBL top hitse value%identityAlignment
A0A0A0KNE6 Uncharacterized protein1.2e-5076.87Show/hide
Query:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSV
        M NQ+DHQ+LLNGWPLGLQVMN+ LR+MAD G   L    PSP+L IPS SFSSLSSSELDTLSTASFFQD SVSLGRLIGL+P DKTWLYFPTEE +SV
Subjt:  MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSV

Query:  AVNSAG--LDVSKT-NSAENE-ISGRICIPIVIGMILKMIRSRRNSR
        + NSAG  +D SKT N+ E+E ISGRICIPIVIG+ILKMIRSRRNSR
Subjt:  AVNSAG--LDVSKT-NSAENE-ISGRICIPIVIGMILKMIRSRRNSR
A0A1S3B0C9 uncharacterized protein LOC1034845006.3e-5277.18Show/hide
Query:  MLNQTD---HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEET
        M NQ+D   HQ+LLNGWPLGLQVMNT LR+MAD G  RL  TDPSPD+ IPS SFSSLSSSELDTLSTASFFQDHSVSLGRLIGL+P DK WLY PTEE 
Subjt:  MLNQTD---HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEET

Query:  QSVAVNSAG-LDVSKTNSAENEISGR-ICIPIVIGMILKMIRSRRNSRS
        +SV  NSAG +D SKT + E+EISGR ICIPIVIG+ILKMIRSRRNS S
Subjt:  QSVAVNSAG-LDVSKTNSAENEISGR-ICIPIVIGMILKMIRSRRNSRS
A0A6J1CL22 uncharacterized protein LOC1110124153.5e-4271.13Show/hide
Query:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFP--TEETQSVAV
        T+ +E+L GWPLGL+VMNTRLR+      +RL PT    +LHIPSMSFSSLSSSELDT+STASFFQDHSVSLGRLIG+RP DKTWL FP  T+ ++SV+V
Subjt:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFP--TEETQSVAV

Query:  NSAGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        N+ GLDVSKTN   +EISGRICIPIVIG++LKMIR+ RNSRS
Subjt:  NSAGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
A0A6J1EFZ8 uncharacterized protein LOC1114338326.1e-4773.57Show/hide
Query:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS
        ++ ++++NGWPLGL+VMNTR+R MAD    RL PTDP P  HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIG+RP DKTWLY PT+E   V+VNS
Subjt:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS

Query:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        A LD  KT SA  EISGRICIPI+IG++LKMIRSRRNSRS
Subjt:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
A0A6J1KXT6 uncharacterized protein LOC1114973163.0e-4672.86Show/hide
Query:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS
        ++ Q++LNGWPLGL+VMNTR+R MAD    RL PTDP P  HIPS SFSSLSSSEL+T+STASFFQDHSVSLGRLIG+RP DKTWLY PT+E   V+ NS
Subjt:  TDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNS

Query:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
        A LD  KT SA  EISGRICIPI+IG++LKMI+SRRNSRS
Subjt:  AGLDVSKTNSAENEISGRICIPIVIGMILKMIRSRRNSRS
SwissProt top hitse value%identityAlignment
Q6DR24 Uncharacterized protein At3g179503.6e-0438.67Show/hide
Query:  DLHIPSM-SFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNSAGLDVSKTNSAEN
        D H+PS  + SS+SSS+LDT ST SFF D S++LG L+G        + F     + V+ + A    S +N+  N
Subjt:  DLHIPSM-SFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNSAGLDVSKTNSAEN
Arabidopsis top hitse value%identityAlignment
AT3G17950.1 unknown protein2.6e-0538.67Show/hide
Query:  DLHIPSM-SFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNSAGLDVSKTNSAEN
        D H+PS  + SS+SSS+LDT ST SFF D S++LG L+G        + F     + V+ + A    S +N+  N
Subjt:  DLHIPSM-SFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNSAGLDVSKTNSAEN
AT5G02440.1 unknown protein7.5e-0541.67Show/hide
Query:  HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSL--------SSSELDTLSTASFFQDHSVSLGRLIGL
        HQE   GWPLGL+ +N R+     L R           +   S+SFSSL        SSS+LD+ S  SFF+D S +LG LIG+
Subjt:  HQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSL--------SSSELDTLSTASFFQDHSVSLGRLIGL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAACCAAACTGATCATCAAGAGCTCCTCAATGGTTGGCCGCTTGGACTCCAGGTTATGAACACCAGACTTCGAATAATGGCAGACCTAGGGAGAGACAGATTATC
GCCCACCGATCCCTCCCCTGATTTGCACATTCCTTCAATGAGTTTCTCCTCTCTGTCTTCCTCTGAACTCGACACTCTGTCGACCGCGTCCTTCTTCCAAGACCATAGCG
TTTCTCTCGGCCGGCTGATCGGACTAAGGCCGCCCGACAAGACCTGGTTGTACTTCCCCACGGAGGAGACTCAGAGTGTAGCGGTTAATTCCGCAGGCTTGGATGTTTCG
AAAACGAATAGCGCTGAAAATGAAATATCGGGACGAATCTGCATTCCGATTGTGATCGGTATGATCTTGAAGATGATCAGAAGTCGGAGAAATTCGAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGTCATAAATCAAGGAACTACTTATTCAGGTGCAATTACTATTTGTATTGTTTTGTGGCTTTTTGGACGCAATAGAAATGACCCAATTTTGTGTTCCAAACAAAAGT
AAATGGTCTTCGAAACTCCCTTTTGTTTGTTGAATCTGATCAATTCTCCGCAGCTCCCTCGTGATTTTCACATTCAATGATTCAAACCCCCAATTCATCAATATATATAT
ATATATAAACCACAGTTTGAGCCTCGCCTGTTCTGAACAACAAACCGCCATGCTTAACCAAACTGATCATCAAGAGCTCCTCAATGGTTGGCCGCTTGGACTCCAGGTTA
TGAACACCAGACTTCGAATAATGGCAGACCTAGGGAGAGACAGATTATCGCCCACCGATCCCTCCCCTGATTTGCACATTCCTTCAATGAGTTTCTCCTCTCTGTCTTCC
TCTGAACTCGACACTCTGTCGACCGCGTCCTTCTTCCAAGACCATAGCGTTTCTCTCGGCCGGCTGATCGGACTAAGGCCGCCCGACAAGACCTGGTTGTACTTCCCCAC
GGAGGAGACTCAGAGTGTAGCGGTTAATTCCGCAGGCTTGGATGTTTCGAAAACGAATAGCGCTGAAAATGAAATATCGGGACGAATCTGCATTCCGATTGTGATCGGTA
TGATCTTGAAGATGATCAGAAGTCGGAGAAATTCGAGAAGTTGAACTATAAAACAACGCCGAACGAGATGAATTTCAATGCATAATGTACCTCAAGCGTATAAAACAAAT
TACGGAAGGGTTTGAGCTTTCATTTTCTCCATCACTTTCCCGAGAAACAAACAGAAACCAGATATCGAGGACTAATCGAAAATGTATTTGAAGAATTCCGATGTAAAATT
TTCTAGTAAATCAGTATATATGTAATGCAACCCCTTTTTTTTAATACTAATTTATGTTTTAGTTCATATTGGGTGTATTTTTAACTTAATAAAGTACGGGAG
Protein sequenceShow/hide protein sequence
MLNQTDHQELLNGWPLGLQVMNTRLRIMADLGRDRLSPTDPSPDLHIPSMSFSSLSSSELDTLSTASFFQDHSVSLGRLIGLRPPDKTWLYFPTEETQSVAVNSAGLDVS
KTNSAENEISGRICIPIVIGMILKMIRSRRNSRS