; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G003000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-repressed 12.5 kDa protein-like
Genome locationchr01:2687402..2688840
RNA-Seq ExpressionLsi01G003000
SyntenyLsi01G003000
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAI52956.1 auxin-repressed protein [Citrullus lanatus subsp. vulgaris]2.1e-63100Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKSQHR
Subjt:  PNSPTVYDWLYSGDTKSQHR

XP_004134697.1 dormancy-associated protein 1 [Cucumis sativus]1.5e-5688.33Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTPVTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKSQHR
Subjt:  PNSPTVYDWLYSGDTKSQHR

XP_008439831.1 PREDICTED: dormancy-associated protein 1-like [Cucumis melo]1.1e-5993.33Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQP RGLGKLRK++TKP I+KDLEG+GSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKS+HR
Subjt:  PNSPTVYDWLYSGDTKSQHR

XP_021911076.1 auxin-repressed 12.5 kDa protein isoform X2 [Carica papaya]2.2e-5284.17Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQPDRGLGKLRKI+TKP  +KD+EGEGSK+QRSMSMP SPGTP TPVTPTTP T ARKDNVWRSVF+PG N ATK IG E+FDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSG+T+S+HR
Subjt:  PNSPTVYDWLYSGDTKSQHR

XP_038881719.1 dormancy-associated protein 1-like [Benincasa hispida]5.7e-6195Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQPDRGLGKLRKI+TKP +LKDLEGEGSKYQRSMS+PASPGTPTTPVTPTTP TAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKSQHR
Subjt:  PNSPTVYDWLYSGDTKSQHR

TrEMBL top hitse value%identityAlignment
A0A0A0KI43 Uncharacterized protein7.1e-5788.33Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTPVTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKSQHR
Subjt:  PNSPTVYDWLYSGDTKSQHR

A0A1S3B0B2 dormancy-associated protein 1-like5.2e-6093.33Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQP RGLGKLRK++TKP I+KDLEG+GSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKS+HR
Subjt:  PNSPTVYDWLYSGDTKSQHR

A0A5D3CMW2 Dormancy-associated protein 1-like5.2e-6093.33Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQP RGLGKLRK++TKP I+KDLEG+GSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKS+HR
Subjt:  PNSPTVYDWLYSGDTKSQHR

A0A6J1INZ7 auxin-repressed 12.5 kDa protein-like1.8e-5285.83Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDD+VAGP+PDRGLGKLRKIT  P I+KDL+GEGSK   SMSMP SP TPTTPVTPTTPLTAARKDNVWRSVFNPGRN ATK+IGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSG+T+S+HR
Subjt:  PNSPTVYDWLYSGDTKSQHR

D1MWZ6 Auxin-repressed protein1.0e-63100Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQHR
        PNSPTVYDWLYSGDTKSQHR
Subjt:  PNSPTVYDWLYSGDTKSQHR

SwissProt top hitse value%identityAlignment
B9DGG8 Dormancy-associated protein 17.1e-3865.6Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQH
        FDKP  PNSP+VYD + +   + +H
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQH

O22611 Dormancy-associated protein 13.4e-4068.64Show/hide
Query:  LLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPN
        +L+KLWDD+VAGPQP+RGL KLRK+TT    LKD +G  ++  RS S+P    TPTTPVTPTTP +A + DNVWRSVFNPG N ATKSIGA VFDKP PN
Subjt:  LLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPN

Query:  SPTVYDWLYSGDTKSQHR
        +PTVYDW+YSGDT+S+HR
Subjt:  SPTVYDWLYSGDTKSQHR

P93017 Dormancy-associated protein homolog 14.9e-3157.76Show/hide
Query:  LWDDVVAGPQPDRGLGKLR-KITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKP-QPNSP
        +WD+ VAGP+P+ GLG+LR KITT+P  +K + GEGS  +   ++  SPGTPTTP        +ARK+NVWRSVF+PG N AT+ +G  +FDKP  PNSP
Subjt:  LWDDVVAGPQPDRGLGKLR-KITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKP-QPNSP

Query:  TVYDWLYSGDTKSQHR
        TVYDWLYS DT+S+HR
Subjt:  TVYDWLYSGDTKSQHR

Q05349 Auxin-repressed 12.5 kDa protein1.4e-3866.39Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ
        MVLL+KLWDD+VAGPQP+RGLG LRK+  +P  LKD EGE SK          P TPTTPVTPTTP+ +ARKDNVWRSVF+PG N ++K++G +VFD PQ
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQ

Query:  PNSPTVYDWLYSGDTKSQH
        PNSPTVYDW+YSG+T+S+H
Subjt:  PNSPTVYDWLYSGDTKSQH

Q9FKV8 Dormancy-associated protein homolog 21.5e-2754.1Show/hide
Query:  MVLLEKLWDDVVAGPQPDR-GLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKP
        M +LE LWDDVVAGP+P+  G G LR+I+T    L +   EG     S+S+PASP TP TP        + RK +VWRSVF+P  N  T+ IGA VFDKP
Subjt:  MVLLEKLWDDVVAGPQPDR-GLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKP

Query:  -QPNSPTVYDWLYSGDTKSQHR
          PNSPTVYDW+YS +T+S+HR
Subjt:  -QPNSPTVYDWLYSGDTKSQHR

Arabidopsis top hitse value%identityAlignment
AT1G28330.1 dormancy-associated protein-like 17.3e-4672.22Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQHR
        FDKP  PNSP+VYDWLYSGD++SQHR
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQHR

AT1G28330.2 dormancy-associated protein-like 15.0e-3965.6Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQH
        FDKP  PNSP+VYD + +   + +H
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQH

AT1G28330.3 dormancy-associated protein-like 15.0e-3965.6Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQH
        FDKP  PNSP+VYD + +   + +H
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQH

AT1G28330.4 dormancy-associated protein-like 12.1e-4571.43Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQHR
        FDKP  PNSP+VYDWLYSGD++SQH+
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQHR

AT1G28330.5 dormancy-associated protein-like 15.0e-3965.6Show/hide
Query:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV
        MVLLEKLWDDVVAGPQPDRGLG+LRKITT+P  ++D+ EG  SK    RS++MPA  SPGTPTTP TPTTP    RKDNVWRSVFNPG N AT++IG+ +
Subjt:  MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDL-EGEGSK--YQRSMSMPA--SPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEV

Query:  FDKP-QPNSPTVYDWLYSGDTKSQH
        FDKP  PNSP+VYD + +   + +H
Subjt:  FDKP-QPNSPTVYDWLYSGDTKSQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCTGGACCTCAGCCTGACCGCGGTCTTGGCAAGCTCAGGAAAATCACCACCAAGCCTTTTATCCTTAAAGATTT
GGAAGGAGAGGGAAGCAAATACCAGAGGTCGATGTCTATGCCAGCTAGTCCCGGAACACCCACCACGCCGGTGACACCTACGACGCCGTTAACGGCGGCGCGTAAGGACA
ATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCAACTAAGTCTATTGGTGCTGAAGTCTTCGACAAACCTCAACCCAACTCTCCAACTGTTTACGACTGGCTT
TACAGCGGTGACACCAAGAGCCAGCACCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCTGGACCTCAGCCTGACCGCGGTCTTGGCAAGCTCAGGAAAATCACCACCAAGCCTTTTATCCTTAAAGATTT
GGAAGGAGAGGGAAGCAAATACCAGAGGTCGATGTCTATGCCAGCTAGTCCCGGAACACCCACCACGCCGGTGACACCTACGACGCCGTTAACGGCGGCGCGTAAGGACA
ATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCAACTAAGTCTATTGGTGCTGAAGTCTTCGACAAACCTCAACCCAACTCTCCAACTGTTTACGACTGGCTT
TACAGCGGTGACACCAAGAGCCAGCACCGTTAAATGGTGGCTGCAGCGGCGGCCGGATGTAAATAGCGTCATAATAGGGTCATGTTTGGTGACGTGGACCGGTGGGTTTT
GGATGTTTATGTGATTTACATGTTCTAACTAGGTTTTGGCATCTGAGTTGTCCAATCAAGTTTGAGTGTTTGTTTAATGTGTAAGTCTGTAGTTAATTAGGTTTAAGTCT
GCTGACACAGCCGATGATCGGACTACTACTTCATAGGGTCCGCCGTGCACGGCGGTGATTAGCGACTAATGATTGTTGTTTAAATAAATGTGGTTTTCTTACCCTTTAAA
TTTAATTAATCAGTTGATAGTGTATGATGTTGATATCCATTAAATTGTGATAAACCCTTCTTTATTACGTAAGTGTGTAATGAAACGTTGGTAATGGAGTGGACCCACCA
CGCAAAAAAAGATCTAGGGCTTAGTGTATTTACAGCTAGGGCCCACAAATGTGGAAACCTTGGGAAAATCCAAAGGAATAACAAAACAAGCGGTTTTGGATAAGGATAGA
GTCAGAATCAATCAGCCAGGTGGGATGTTAGAATTATTGCAGTATTATTTTATTCAATCTACATCATGGATTTAATTTTAATTGGCATTACTTTTATCTTTTTTTAAGTA
A
Protein sequenceShow/hide protein sequence
MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWL
YSGDTKSQHR