; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G003080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description30S ribosomal protein S5
Genome locationchr01:2742619..2744770
RNA-Seq ExpressionLsi01G003080
SyntenyLsi01G003080
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009955 - adaxial/abaxial pattern specification (biological process)
GO:0032544 - plastid translation (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5
IPR005324 - Ribosomal protein S5, C-terminal
IPR005712 - Ribosomal protein S5, bacterial-type
IPR013810 - Ribosomal protein S5, N-terminal
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR018192 - Ribosomal protein S5, N-terminal, conserved site
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052681.1 30S ribosomal protein S5 [Cucumis melo var. makuwa]2.2e-14992.53Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSDIDTTFFDNVNP ED+ +DPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAAAYEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

XP_004134699.1 30S ribosomal protein S5, chloroplastic [Cucumis sativus]5.3e-15193.51Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSDIDTTFFDNVNPQED+VYDPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAA YEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

XP_008439845.1 PREDICTED: 30S ribosomal protein S5, chloroplastic [Cucumis melo]8.4e-14992.21Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSD DTTFFDNVNP ED+ +DPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAAAYEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

XP_023544602.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-14489.94Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASS +VPISSLSLRSSPS+ LPIP  KPFT+LHSAV +P ISSS    SILSA RAK SDIDTTFF+++NP+EDVVYDPPEVPEGFV PPSFDEGPLES
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        EDEIAAAYEELYGPAYSGVSVL NDIYVMDSK+KKVGGFGSK +K+K RDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISA
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSA+NARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAV KMKQFRDVA+ERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

XP_038883765.1 30S ribosomal protein S5, chloroplastic [Benincasa hispida]3.0e-15496.1Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAV +P ISSSSSSF ILSAT  KSSDIDTTFFDNV PQEDVVYDPPEVPEGFVPPPSFDEGP ES
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        EDEIAAAYEE+YGPAYSGVSVL NDIYVMDSKVKKVGGFGSK KKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

TrEMBL top hitse value%identityAlignment
A0A0A0KK69 S5 DRBM domain-containing protein2.6e-15193.51Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSDIDTTFFDNVNPQED+VYDPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAA YEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

A0A1S3AZA3 30S ribosomal protein S5, chloroplastic4.1e-14992.21Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSD DTTFFDNVNP ED+ +DPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAAAYEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

A0A5D3CMJ7 30S ribosomal protein S51.1e-14992.53Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISS+SLRSSPSHRL IPLFKPF +LHS V +  ISSSSSS SILSATRAKSSDIDTTFFDNVNP ED+ +DPPEVPEGFVPPPSFDEGP+E+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAAAYEE+YGPAYSGVSVL NDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

A0A6J1CLD7 30S ribosomal protein S5, chloroplastic1.1e-14390.26Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASSTLVPISSLSLRSSPSHRLPI   KPFTVLHSA+ +  ISSS    SIL+  RAKSSDIDTTFFDNV P++DVVYDPPEVPEGFV PPSFDEGPLE+
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIAAAYEE+YGPAYSGVSVL NDI+VMDSKVKKVGGFGSK KKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

A0A6J1IU44 30S ribosomal protein S5, chloroplastic-like2.0e-14389.94Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES
        MASS +VPISSLSLRSSPS+ LPIP  KPFTVLHSAV +P ISSS     ILSA RAK SDIDT FF++VNP+EDVVYDPPEVPEGFV PPSFDEGPLES
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        EDEIAAAYEELYGPAYSGVSVL NDIYVMDSK+KKVGGFGSK +K+K RDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISA
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSA+NARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAV KMKQFRDVA+ERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

SwissProt top hitse value%identityAlignment
P51298 30S ribosomal protein S5, chloroplastic3.3e-4758.68Show/hide
Query:  KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRP
        K  K K +D G++ERVVQV+RVTKVVKGGK+L FR I+VVG++QGQVGVGVGKA +VI AV+K   +A++++VTVP+TK  + PH   G  GAA+V+LRP
Subjt:  KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRP

Query:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW
        ++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA +  + +++ F + A++RG+P+E L+
Subjt:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW

P93014 30S ribosomal protein S5, chloroplastic1.8e-10670.13Show/hide
Query:  SSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQ--EDVVYDPPEVPEGFVPPPSFDEGPLES
        +S L  +SSLSL +  S  +     K      S +        +  FS L+  +A S+D +T FF++  P+   +VV+DPP  PEGFV PP FDEG  E+
Subjt:  SSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQ--EDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIA A+EELYGPAYSG S+L  DIYVMDSK KK  G G K KKDK RDGF+ERVVQVRRVTKVVKGGKQL FRAIVVVGDKQG VGVG  KAKEV++A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK

Q1XDJ0 30S ribosomal protein S5, chloroplastic1.1e-4758.68Show/hide
Query:  KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRP
        K  K K +D G++ERVVQV+RVTKVVKGGK+L FR I+V+G++QGQVGVGVGKA +VI AV+K   +A++++VTVP+TK  + PH   G  GAAKV+LRP
Subjt:  KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRP

Query:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW
        ++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA +  + +++ F + A++RG+P+E L+
Subjt:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW

Q31L23 30S ribosomal protein S59.6e-4754.49Show/hide
Query:  DSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEG
        + K KK        ++ +    + ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGVGVGKA +VI AV+K   + ++++V VP+T+  + PH S G
Subjt:  DSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEG

Query:  DYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW
        + GAA+V++RPA+PGTGVIAGGAVR VLE+AGV+N L K+LGS + LNNARA + A+  ++ F++VAQ R IP+E+L+
Subjt:  DYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW

Q9ST69 30S ribosomal protein S5, chloroplastic1.5e-10869.3Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRA--------KSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPS
        MA++     S+ SL  +  HR  IPLF   T L S       SSS   F  LS+TR+        K  DID TFF+  NP E++ +DPPE PEG++PP +
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRA--------KSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPS

Query:  FDEGPLESEDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVG
         DE P ESE+EIA AYEELYG AYSG S+L ND+Y MDSK+KK  GFGSK KK+K RDGF+E VVQVRRVTKVVKGGK + FRAIVVVGDK+GQVGVGVG
Subjt:  FDEGPLESEDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVG

Query:  KAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQF
        KAKEV+SAVQK+AV+ARRNI+TVPMTKYLTFPHR+E DYGAA+VMLRPA+PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+VAVQ M+QF
Subjt:  KAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQF

Query:  RDVAQERGIPMEELWK
         DVA++RGIPMEELWK
Subjt:  RDVAQERGIPMEELWK

Arabidopsis top hitse value%identityAlignment
AT1G58380.1 Ribosomal protein S5 family protein2.7e-1231.97Show/hide
Query:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG
        + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+G
Subjt:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG

Query:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF
        ++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF

AT1G58983.1 Ribosomal protein S5 family protein2.7e-1231.97Show/hide
Query:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG
        + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+G
Subjt:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG

Query:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF
        ++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF

AT1G59359.1 Ribosomal protein S5 family protein2.7e-1231.97Show/hide
Query:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG
        + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+G
Subjt:  ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTG

Query:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF
        ++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  VIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVVAVQKMKQF

AT1G64880.1 Ribosomal protein S5 family protein5.3e-1633.33Show/hide
Query:  KKDKP--RDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
        KK +P  R G+D  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   SA+QK+     +N+  V   +  T  H  +  Y   K+ L PA
Subjt:  KKDKP--RDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA

Query:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
           TG+ AG  V+ +L +AG +N   K +GS N+ N  +A + A+  ++  +DV ++ G
Subjt:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

AT2G33800.1 Ribosomal protein S5 family protein1.3e-10770.13Show/hide
Query:  SSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQ--EDVVYDPPEVPEGFVPPPSFDEGPLES
        +S L  +SSLSL +  S  +     K      S +        +  FS L+  +A S+D +T FF++  P+   +VV+DPP  PEGFV PP FDEG  E+
Subjt:  SSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQ--EDVVYDPPEVPEGFVPPPSFDEGPLES

Query:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA
        E+EIA A+EELYGPAYSG S+L  DIYVMDSK KK  G G K KKDK RDGF+ERVVQVRRVTKVVKGGKQL FRAIVVVGDKQG VGVG  KAKEV++A
Subjt:  EDEIAAAYEELYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA

Query:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG
        VQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFRDVAQERG
Subjt:  VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG

Query:  IPMEELWK
        IPMEELWK
Subjt:  IPMEELWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTCAACTCTCGTCCCCATTTCCTCTCTTTCCCTGCGCTCTTCTCCTTCCCACCGCCTCCCAATTCCACTATTTAAGCCTTTCACCGTCCTCCACTCCGCCGT
ACTCATACCCCAAATCTCCTCCTCCTCCTCCTCTTTCTCCATTCTCTCTGCAACTCGAGCTAAATCCTCAGACATCGACACCACCTTCTTCGACAACGTCAATCCCCAAG
AAGACGTCGTTTACGACCCCCCCGAAGTCCCCGAAGGCTTCGTTCCCCCTCCCTCCTTCGACGAGGGCCCTCTAGAAAGCGAGGACGAAATCGCCGCCGCTTACGAGGAG
CTCTATGGCCCGGCTTATAGTGGAGTCAGTGTTCTGGAAAACGACATTTATGTAATGGATTCTAAGGTCAAGAAAGTGGGTGGATTCGGCTCAAAGGTCAAGAAGGACAA
GCCGCGAGACGGGTTCGATGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAAC
AGGGCCAAGTGGGTGTTGGTGTCGGTAAAGCTAAGGAAGTCATCTCCGCTGTTCAGAAATCGGCAGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAGTAC
CTAACATTTCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTAAGACCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCT
CGAAATGGCGGGTGTCGAAAATGCATTAGGGAAGCAACTTGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGTCGCCGTGCAGAAGATGAAACAGTTTAGGG
ACGTCGCGCAGGAGCGTGGCATTCCGATGGAAGAGTTATGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
TGGAATTATCCATTTATCCACTTGACCACATTGAAACGACGTCGTTGGAACCGAGTTTCTTCACTCATAATTCGTCGATTTGGGGATAAGCCTCCATCTCTGAACCCACA
AACCTTCTCAATCCTTCCTTCCTTCAATGGCCTCTTCAACTCTCGTCCCCATTTCCTCTCTTTCCCTGCGCTCTTCTCCTTCCCACCGCCTCCCAATTCCACTATTTAAG
CCTTTCACCGTCCTCCACTCCGCCGTACTCATACCCCAAATCTCCTCCTCCTCCTCCTCTTTCTCCATTCTCTCTGCAACTCGAGCTAAATCCTCAGACATCGACACCAC
CTTCTTCGACAACGTCAATCCCCAAGAAGACGTCGTTTACGACCCCCCCGAAGTCCCCGAAGGCTTCGTTCCCCCTCCCTCCTTCGACGAGGGCCCTCTAGAAAGCGAGG
ACGAAATCGCCGCCGCTTACGAGGAGCTCTATGGCCCGGCTTATAGTGGAGTCAGTGTTCTGGAAAACGACATTTATGTAATGGATTCTAAGGTCAAGAAAGTGGGTGGA
TTCGGCTCAAAGGTCAAGAAGGACAAGCCGCGAGACGGGTTCGATGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAG
GGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTGGGTGTTGGTGTCGGTAAAGCTAAGGAAGTCATCTCCGCTGTTCAGAAATCGGCAGTCAATGCTCGCCGGAACA
TTGTCACCGTTCCCATGACCAAGTACCTAACATTTCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTAAGACCTGCTTCTCCTGGTACTGGTGTGATT
GCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAAAATGCATTAGGGAAGCAACTTGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGTCGC
CGTGCAGAAGATGAAACAGTTTAGGGACGTCGCGCAGGAGCGTGGCATTCCGATGGAAGAGTTATGGAAGTGAAGAGGGAAAGGGTGAGACTTATTTTTCTTTTGTCTCA
TTTTTTGCTTTGACGTATATTAGTGCATCTATTCTTGTAAGTTGTAACTCAGTGTTATAAAAACGACAGGCTTCATTCCTTTGTTTCTTATTTCTCTCCTTACAACATAT
ATAAGTTGAGATAGCTTTGAAAGGCAAGTATATTTTCTTTGTCTGTTGCTTCACTCTGTAGATGGCTTTTATAACAGTGTTAGGATTTTGAAGAACAGTGTATTAAGTTT
TTAACTGGGCTGTGGGCAGAGTCTAGGCTATCTGAAAATGTCTTACAAATC
Protein sequenceShow/hide protein sequence
MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVLIPQISSSSSSFSILSATRAKSSDIDTTFFDNVNPQEDVVYDPPEVPEGFVPPPSFDEGPLESEDEIAAAYEE
LYGPAYSGVSVLENDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKY
LTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELWK