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Lsi01G003230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like protein
Genome locationchr01:2849412..2853019
RNA-Seq ExpressionLsi01G003230
SyntenyLsi01G003230
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13131.1 uncharacterized protein E5676_scaffold255G007410 [Cucumis melo var. makuwa]2.6e-3370.31Show/hide
Query:  MQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSDDFTIFEECFHACVSGCGFK--FDVESEKADKIQPNRPAKP
        MQMG+PG NAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQR   + +  Y +   S  F  +        SG      F+VE EKADKIQPNRPAKP
Subjt:  MQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSDDFTIFEECFHACVSGCGFK--FDVESEKADKIQPNRPAKP

Query:  VPVVSKPSPRPPIAESIAKNEDLPSTSA
         PVVSKPSPRPPI ESIAKNEDLPSTSA
Subjt:  VPVVSKPSPRPPIAESIAKNEDLPSTSA

XP_004134712.1 uncharacterized protein LOC101206260 [Cucumis sativus]1.9e-3656.8Show/hide
Query:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS
        MMIPQQWASPCGNQCTQKYAALTQIP+R       F K+G    G     AW   L     I Y                PV + +       +  + D 
Subjt:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS

Query:  D--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
             +  EECFHACVSGCGFKF+VE EKADKIQPNRPAKP PVVSKPSPRPPI ESIAKNEDLPSTSA
Subjt:  D--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

XP_008439869.1 PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo]1.5e-4459.14Show/hide
Query:  RKQSADSGEDLEEAVYYMMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVT
        RKQSA S EDL+EAVYYMMIPQQWASPCGNQCTQKYAALTQIP+R       F K+G    G     AW   L     I Y                PV 
Subjt:  RKQSADSGEDLEEAVYYMMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVT

Query:  QRYLIILLLFYGIFFDSD--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
        + +       +  + D      +  EECFHACVSGCGFKF+VE EKADKIQPNRPAKP PVVSKPSPRPPI ESIAKNEDLPSTSA
Subjt:  QRYLIILLLFYGIFFDSD--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

XP_022142369.1 uncharacterized protein LOC111012509 [Momordica charantia]9.9e-3352.66Show/hide
Query:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS
        MMIPQQWASPCGNQCT KYAALTQIP+R       F K+G    G      W+  L     I Y                PV + +       +  + D 
Subjt:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS

Query:  DD--FTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
             +  EECFHACVSGCGFKF+V+SEKADKIQPNRP KP PVV  PSPRPPI ES  KNEDLPSTSA
Subjt:  DD--FTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

XP_038883449.1 uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida]4.6e-3858.58Show/hide
Query:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS
        MMIPQQWASPCGNQCTQKYAALTQIP+R       F K+G    G     AW+  L     I Y                PV + +       +  + D 
Subjt:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS

Query:  D--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
             +  EECFHACVSGCGFKFDVE EKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
Subjt:  D--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

TrEMBL top hitse value%identityAlignment
A0A1S3AZC9 uncharacterized protein LOC103484528 isoform X17.1e-4559.14Show/hide
Query:  RKQSADSGEDLEEAVYYMMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVT
        RKQSA S EDL+EAVYYMMIPQQWASPCGNQCTQKYAALTQIP+R       F K+G    G     AW   L     I Y                PV 
Subjt:  RKQSADSGEDLEEAVYYMMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVT

Query:  QRYLIILLLFYGIFFDSD--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
        + +       +  + D      +  EECFHACVSGCGFKF+VE EKADKIQPNRPAKP PVVSKPSPRPPI ESIAKNEDLPSTSA
Subjt:  QRYLIILLLFYGIFFDSD--DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

A0A5D3CMU3 Uncharacterized protein1.3e-3370.31Show/hide
Query:  MQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSDDFTIFEECFHACVSGCGFK--FDVESEKADKIQPNRPAKP
        MQMG+PG NAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQR   + +  Y +   S  F  +        SG      F+VE EKADKIQPNRPAKP
Subjt:  MQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSDDFTIFEECFHACVSGCGFK--FDVESEKADKIQPNRPAKP

Query:  VPVVSKPSPRPPIAESIAKNEDLPSTSA
         PVVSKPSPRPPI ESIAKNEDLPSTSA
Subjt:  VPVVSKPSPRPPIAESIAKNEDLPSTSA

A0A6J1CKR8 uncharacterized protein LOC1110125094.8e-3352.66Show/hide
Query:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS
        MMIPQQWASPCGNQCT KYAALTQIP+R       F K+G    G      W+  L     I Y                PV + +       +  + D 
Subjt:  MMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDS

Query:  DD--FTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
             +  EECFHACVSGCGFKF+V+SEKADKIQPNRP KP PVV  PSPRPPI ES  KNEDLPSTSA
Subjt:  DD--FTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

A0A6J1EJ45 uncharacterized protein LOC1114337862.4e-3251.19Show/hide
Query:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD
        MIPQQW+SPCGNQCTQKYAALT+IP+R       F K+G    G    +AW+  L     I Y                PV + +       +  + D  
Subjt:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD

Query:  --DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
            +  EECFHAC SGCGFKFDV+S  ADKIQ NRP KPVP+VSKP+PRPPI E +AKNEDLPSTSA
Subjt:  --DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

A0A6J1KVS0 uncharacterized protein LOC1114968772.4e-3251.19Show/hide
Query:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD
        MIPQQW+SPCGNQCTQKYAALT+IP+R       F K+G    G    +AW+  L     I Y                PV + +       +  + D  
Subjt:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD

Query:  --DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA
            +  EECFHAC SGCGFKFDV+S  ADKIQ NRP KPVP+VSKP+PRPPI E +AKNEDLPSTSA
Subjt:  --DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAESIAKNEDLPSTSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21720.1 unknown protein8.7e-1937.06Show/hide
Query:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD
        MIPQQW  PCG++CT KY+A TQ+P+R       F K+G         ++W++ +     I Y         L D     V  R                
Subjt:  MIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVMQMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSD

Query:  DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAES----IAKNEDLPSTSA
        D    EECFHACV+GCG+KFDVE+E  +K++P RP  P P   KP P PP   S        ED+ +TSA
Subjt:  DFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAES----IAKNEDLPSTSA

AT4G21720.2 unknown protein4.3e-1052.31Show/hide
Query:  EECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAES----IAKNEDLPSTSA
        EECFHACV+GCG+KFDVE+E  +K++P RP  P P   KP P PP   S        ED+ +TSA
Subjt:  EECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPIAES----IAKNEDLPSTSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATTCGAAAATATAAACCTAAATTTGTAATTGAGATTAAACTTGTAATTTACCACAAGGATCCGAATAAGGAAAAAGAGAATTCAGAGAATGCGAGCATTCGCATTTT
CATTCCCCTTTGGGCTCCTCCTCAACATTACAACCAGGGAACAAGAAAACAATCGGCTGACAGCGGTGAAGATCTTGAGGAGGCTGTGTATTACATGATGATACCGCAAC
AATGGGCGTCTCCTTGTGGAAACCAATGCACGCAGAAATACGCAGCCCTCACCCAGATTCCTTATAGAAACTTACGTCGTGGCGGGTATTTTGCAAAAAGGGGTGTGATG
CAGATGGGGAGGCCTGGGAGGAATGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGG
TCTGCCAGTTACTCAGAGGTACTTAATCATCTTGTTGTTATTTTATGGCATTTTCTTCGACTCTGATGACTTCACCATATTTGAGGAATGTTTCCATGCCTGTGTATCTG
GTTGTGGCTTTAAGTTTGATGTTGAATCGGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAGCCAGTGCCTGTTGTTTCAAAACCATCCCCACGACCTCCAATT
GCTGAATCTATTGCCAAAAATGAAGATTTACCAAGCACTTCTGCATAG
mRNA sequenceShow/hide mRNA sequence
AAAATTCGAAAATATAAACCTAAATTTGTAATTGAGATTAAACTTGTAATTTACCACAAGGATCCGAATAAGGAAAAAGAGAATTCAGAGAATGCGAGCATTCGCATTTT
CATTCCCCTTTGGGCTCCTCCTCAACATTACAACCAGGGAACAAGAAAACAATCGGCTGACAGCGGTGAAGATCTTGAGGAGGCTGTGTATTACATGATGATACCGCAAC
AATGGGCGTCTCCTTGTGGAAACCAATGCACGCAGAAATACGCAGCCCTCACCCAGATTCCTTATAGAAACTTACGTCGTGGCGGGTATTTTGCAAAAAGGGGTGTGATG
CAGATGGGGAGGCCTGGGAGGAATGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGG
TCTGCCAGTTACTCAGAGGTACTTAATCATCTTGTTGTTATTTTATGGCATTTTCTTCGACTCTGATGACTTCACCATATTTGAGGAATGTTTCCATGCCTGTGTATCTG
GTTGTGGCTTTAAGTTTGATGTTGAATCGGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAGCCAGTGCCTGTTGTTTCAAAACCATCCCCACGACCTCCAATT
GCTGAATCTATTGCCAAAAATGAAGATTTACCAAGCACTTCTGCATAGCAACACACAATGCAGATAAACGAGGAAACCTGGCGCATCAAAATTATAGCTTACATCTCCCG
TTGCTATGTTTTCCCGCACGTGGGCTTCCATGTTCTGTTGGATTATATATTATGACTACTTGTAAGTGCAGTCCTTCCTTGCCTGTGAAAGGACTTAGGTCTCTGACATA
GATGTTTGTCCTGTATGCTGAGAGTTGCTAATTGTCTGCCTTGTTGTAGCTTTCATTGCTCTGGCTTCAAAAGTTGGAGAATTTTGTGAAACGATAATTTATTATAGTAA
ATTGGGGAATTGGGGACCTAATTGTTTCGGAAAAGAAGTAAATTTCTGCTGTAGCTTGCCTTT
Protein sequenceShow/hide protein sequence
KIRKYKPKFVIEIKLVIYHKDPNKEKENSENASIRIFIPLWAPPQHYNQGTRKQSADSGEDLEEAVYYMMIPQQWASPCGNQCTQKYAALTQIPYRNLRRGGYFAKRGVM
QMGRPGRNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRYLIILLLFYGIFFDSDDFTIFEECFHACVSGCGFKFDVESEKADKIQPNRPAKPVPVVSKPSPRPPI
AESIAKNEDLPSTSA