| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia] | 4.5e-175 | 75.39 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus] | 8.3e-177 | 76.05 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima] | 7.0e-176 | 75.61 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo] | 4.5e-175 | 75.39 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida] | 5.4e-176 | 75.83 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KK55 RNA polymerase II transcription factor B subunit 2 | 4.0e-177 | 76.05 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| A0A2N9J1V4 RNA polymerase II transcription factor B subunit 2 | 6.2e-170 | 82.38 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSEVLARE
MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKK+VLQMLYID P+ AKS+ EWVLPDG SK++VA+DRLIQLRVF ET DSEVL RE
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSEVLARE
Query: PMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL--------------------ERGVDP
PMPSNITVRLPSLE+L+ YAL QWECFLLQLI+S QAE+PSNISSS+MKVFQ+GLLSQRDKEAPRLTESGFQFL ERGVDP
Subjt: PMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL--------------------ERGVDP
Query: ADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQ
ADLISFLLELSFHVTGEAY+ +TLTE QR IKDL DLGLVKLQQGRK+SWFIPTKLATNLS+SL DSSSRKQI+TFLQQNAHPRVA+R+P+VPENVTDQ
Subjt: ADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQ
Query: IRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
IRLWESDLNRV++TPAH+YDEFPS+EVFEAACDYAREWNGLLWEDSK MRLVVKA+IH HMR+HLRRQK
Subjt: IRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| A0A6J1CK16 RNA polymerase II transcription factor B subunit 2 | 1.6e-170 | 69.65 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
ERGVDPADLISFLLELSFHVTGE AYDIDTLTEEQRYAIKDLAD
Subjt: -----------------ERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
Query: LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFL
LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK QIVTFL
Subjt: LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFL
Query: QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt: QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| A0A6J1EGA7 RNA polymerase II transcription factor B subunit 2 | 1.4e-174 | 75.17 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| A0A6J1IIT5 RNA polymerase II transcription factor B subunit 2 | 3.4e-176 | 75.61 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-------
Query: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
EVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFL
Subjt: ----------------SEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O70422 General transcription factor IIH subunit 4 | 7.9e-29 | 24.83 | Show/hide |
Query: KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR------------------VFIE
+N + + L LD+LY + C A+ R LP LAK +V++ML+++ P+ ++ WV + + + L LR VF +
Subjt: KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR------------------VFIE
Query: TADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---------
+L S+ T +L + L+ YA ++WE L ++ S A +++ + Q GL+ S E P +T +GFQFL
Subjt: TADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---------
Query: -----------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------------
RG+D +++SFL +LSF G+ Y ++ +++ ++ L + GLV Q+ RK + PT+LA NLS
Subjt: -----------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------------
Query: ----------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
++A + +QI+ FL+ AHP + ++ P +P +TDQIRLWE + +R+ T Y++F
Subjt: ----------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
Query: PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
S+ FE +ARE L++E+S +VV H+ ++ +RQK
Subjt: PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| P60027 General transcription factor IIH subunit 4 | 3.5e-29 | 24.5 | Show/hide |
Query: QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR----------------
+V + +N + + L LD+LY + C A+ R LP LAK +V++ML+++ P+ ++ WV + + + L LR
Subjt: QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR----------------
Query: --VFIETADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---
+F + +L S+ T +L + L+ YA ++WE L ++ S A +++ + Q GL+ S E P +T +GFQFL
Subjt: --VFIETADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
RG+D +++SFL +LSF G+ Y ++ +++ ++ L + GLV Q+ RK + PT+LA NLS
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
Query: ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
++A + +QI+ FL+ AHP + ++ P +P +TDQIRLWE + +R+ T
Subjt: ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
Query: HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
Y++F S+ FE +ARE L++E+S +VV H+ ++ +RQK
Subjt: HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| P87303 General transcription and DNA repair factor IIH subunit tfb2 | 4.3e-27 | 23.13 | Show/hide |
Query: QLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSEVLAREPMPSNITV----------------
+LY+ C A+ R LP LA+++V+ ML+ PV+ + W+ + ++L+++ +F L E IT
Subjt: QLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSEVLAREPMPSNITV----------------
Query: ---RLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL--------------------ERGVDPADLIS
L +++ L+AYA + WE L ++ + +A+ P V+ + ++G L K R+T +GFQFL + +DP ++
Subjt: ---RLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL--------------------ERGVDPADLIS
Query: FLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS-------------------------------------------
FL L G AY +D LT+ Q+ ++DL + GLV Q+ F PT+LAT L+
Subjt: FLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS-------------------------------------------
Query: ----------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNG
+L + + +QI+T+L +AHP++ +P +P + DQI LWE + NR+ TP + +F + F+ A +YA+E
Subjt: ----------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNG
Query: LLWEDSKNMRLVVKADIHTHMREHLRRQ
L+W+ S + M +L+R+
Subjt: LLWEDSKNMRLVVKADIHTHMREHLRRQ
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| Q680U9 General transcription and DNA repair factor IIH subunit TFB2 | 6.2e-143 | 60.22 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A MEEWVL DG SK++VA+DRLIQLR+F E +D +
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
Query: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
VL REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFL
Subjt: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTG+AY+++TLTE Q +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H MRE L Q
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
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| Q92759 General transcription factor IIH subunit 4 | 3.5e-29 | 24.5 | Show/hide |
Query: QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR----------------
+V + +N + + L LD+LY + C A+ R LP LAK +V++ML+++ P+ ++ WV + + + L LR
Subjt: QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLR----------------
Query: --VFIETADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---
+F + +L S+ T +L + L+ YA ++WE L ++ S A +++ + Q GL+ S E P +T +GFQFL
Subjt: --VFIETADSEVLAREPMPSNITVRL------PSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
RG+D +++SFL +LSF G+ Y ++ +++ ++ L + GLV Q+ RK + PT+LA NLS
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
Query: ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
++A + +QI+ FL+ AHP + ++ P +P +TDQIRLWE + +R+ T
Subjt: ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
Query: HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
Y++F S+ FE +ARE L++E+S +VV H+ ++ +RQK
Subjt: HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G17020.1 transcription factor-related | 4.4e-144 | 60.22 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A MEEWVL DG SK++VA+DRLIQLR+F E +D +
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
Query: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
VL REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFL
Subjt: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTG+AY+++TLTE Q +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H MRE L Q
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
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| AT4G17020.2 transcription factor-related | 4.4e-144 | 60.22 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A MEEWVL DG SK++VA+DRLIQLR+F E +D +
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
Query: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
VL REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFL
Subjt: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTG+AY+++TLTE Q +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H MRE L Q
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
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| AT4G17020.3 transcription factor-related | 4.4e-144 | 60.22 | Show/hide |
Query: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A MEEWVL DG SK++VA+DRLIQLR+F E +D +
Subjt: MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADSE-----
Query: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
VL REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFL
Subjt: ------------------VLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFL---
Query: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
ER VDPADLISFLLELSFHVTG+AY+++TLTE Q +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK
Subjt: -----------------ERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
Query: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt: ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Query: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H MRE L Q
Subjt: YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
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