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Lsi01G003500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:3105909..3106109
RNA-Seq ExpressionLsi01G003500
SyntenyLsi01G003500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40912.1 conserved hypothetical protein [Ricinus communis]1.2e-0462.79Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFSHS
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS

KAA0052717.1 hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa]1.1e-1698Show/hide
Query:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS
        MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS+S
Subjt:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS

KAG6603714.1 hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0466.67Show/hide
Query:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSH
        ING  L R+ S RLIPKRGQV MGI+ G+A +VTS+FSH
Subjt:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSH

KAG6696678.1 hypothetical protein I3842_09G160300 [Carya illinoinensis]4.6e-0471.05Show/hide
Query:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS
        ING     R+SGR IPKRGQVK+GI+VGLA +VTSIFS
Subjt:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS

KAG7026593.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-0965.52Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSTVLNNNIAHLHRHKH
        MNNING+R+ RRI GR IPKRGQVKMGIMVG+  TVTSIFSH         H H H H
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSTVLNNNIAHLHRHKH

TrEMBL top hitse value%identityAlignment
A0A0A0KLE0 Uncharacterized protein3.5e-0563.64Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHST
        +N IN   L R+ S RLIPKRGQVK+GI+VG+A +VTSIFSH +
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHST

A0A0S3QZK4 Uncharacterized protein2.9e-0450.88Show/hide
Query:  AKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSTV-LNNNIAHL
        A+  + ING+ + RR SGR IPKRGQVK+GI++GLA +V SIFS + +  +  ++HL
Subjt:  AKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSTV-LNNNIAHL

A0A314YFB0 Uncharacterized protein2.9e-0472.97Show/hide
Query:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIF
        +NG  L RR+SGR IPKRGQVKMGI+VGLA +V SIF
Subjt:  INGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIF

A0A5A7UDZ4 Uncharacterized protein5.1e-1798Show/hide
Query:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS
        MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS+S
Subjt:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS

B9S603 Uncharacterized protein5.9e-0562.79Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFSHS
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAAGCTAAGATGATGAACAACATCAATGGTCAGAGATTGGGAAGGAGAATTTCTGGGCGTCTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATCATGGT
GGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTCACAGCACAGTACTCAACAACAACATTGCACATCTACATAGACACAAACATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGAAGCTAAGATGATGAACAACATCAATGGTCAGAGATTGGGAAGGAGAATTTCTGGGCGTCTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATCATGGT
GGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTCACAGCACAGTACTCAACAACAACATTGCACATCTACATAGACACAAACATAGATAG
Protein sequenceShow/hide protein sequence
MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSTVLNNNIAHLHRHKHR