; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G003510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionctenidin-3-like
Genome locationchr01:3131210..3131611
RNA-Seq ExpressionLsi01G003510
SyntenyLsi01G003510
Gene Ontology termsGO:0007218 - neuropeptide signaling pathway (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13106.1 ctenidin-3-like [Cucumis melo var. makuwa]1.9e-6593.98Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIP+FP LIAILLLSPS SLAT+RKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

XP_004134728.1 ctenidin-3 [Cucumis sativus]3.4e-6290.98Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFP LIAILLLSPS SLATARKDGGF GMFGPGNGF DIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCK KGPC+NKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

XP_008439905.1 PREDICTED: ctenidin-3-like [Cucumis melo]1.5e-6594.74Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFP LIAILLLSPS SLAT+RKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

XP_022926656.1 neuropeptide-like protein 31 [Cucurbita moschata]3.9e-5885.93Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKD--GGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCP
        MN  + I  LL+A+LLLSP+FSLATAR    GGF GMFGPGNGFDDIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCP
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKD--GGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCP

Query:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        AKCFSSYSRSGKGFGGGGGGGGCTIDC+KKCIGYC
Subjt:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

XP_038881254.1 ctenidin-3 [Benincasa hispida]2.8e-6493.23Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFPLLIA+LLLSPS SLATARKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIR PVVCKEKGPC+NKKV CPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKGFGGGGGGGGCTIDC+KKCI YC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ2 Uncharacterized protein1.6e-6290.98Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFP LIAILLLSPS SLATARKDGGF GMFGPGNGF DIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCK KGPC+NKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

A0A1S3AZW7 ctenidin-3-like7.1e-6694.74Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFP LIAILLLSPS SLAT+RKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

A0A5A7UGS4 Ctenidin-3-like7.1e-6694.74Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIPIFP LIAILLLSPS SLAT+RKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

A0A5D3CRS6 Ctenidin-3-like9.2e-6693.98Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
        MN FIP+FP LIAILLLSPS SLAT+RKDGGF GMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

A0A6J1EFI3 neuropeptide-like protein 311.9e-5885.93Show/hide
Query:  MNPFIPIFPLLIAILLLSPSFSLATARKD--GGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCP
        MN  + I  LL+A+LLLSP+FSLATAR    GGF GMFGPGNGFDDIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCP
Subjt:  MNPFIPIFPLLIAILLLSPSFSLATARKD--GGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCP

Query:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        AKCFSSYSRSGKGFGGGGGGGGCTIDC+KKCIGYC
Subjt:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)4.2e-1853Show/hide
Query:  FGPGNGFDDIPGFGKGWDKGIV--GGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        +  G G    PG       G +  G G GG Y    GGY KG  +R  V+C+EKG C+ KK+TCPAKCF S SR GKG+  GGGGGGCTIDC KKC+ YC
Subjt:  FGPGNGFDDIPGFGKGWDKGIV--GGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC

AT4G21620.1 glycine-rich protein2.0e-3663.2Show/hide
Query:  LLIAILLLSPSFSLATARKDG-GFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRS
        LLI IL+ +   +   +  DG GF G+  PG+GF  IPGFG G+    VGGGYGGG+GGP GG+GKGG++R  V CKEKGPC  KK+ CPAKCF S+SRS
Subjt:  LLIAILLLSPSFSLATARKDG-GFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGYC
        GKG+GGGGGGGGCT+DC KKCI YC
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGYC

AT4G21620.2 glycine-rich protein2.7e-2575Show/hide
Query:  GGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
        GG+GKGG++R  V CKEKGPC  KK+ CPAKCF S+SRSGKG+GGGGGGGGCT+DC KKCI YC
Subjt:  GGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCCTTCATCCCCATTTTCCCTCTTCTCATCGCCATTCTCCTTCTCTCGCCGTCTTTCTCTCTCGCCACCGCCCGGAAGGACGGCGGCTTCGCTGGCATGTTCGG
ACCTGGCAACGGATTTGACGACATACCCGGCTTTGGAAAGGGCTGGGACAAGGGGATCGTCGGCGGTGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGTTACGGCA
AGGGTGGCATCATAAGGAAACCTGTGGTGTGTAAAGAGAAAGGTCCTTGTTTCAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAG
GGCTTCGGCGGTGGCGGCGGTGGCGGTGGCTGCACCATCGACTGCTCTAAGAAATGTATCGGCTACTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCCTTCATCCCCATTTTCCCTCTTCTCATCGCCATTCTCCTTCTCTCGCCGTCTTTCTCTCTCGCCACCGCCCGGAAGGACGGCGGCTTCGCTGGCATGTTCGG
ACCTGGCAACGGATTTGACGACATACCCGGCTTTGGAAAGGGCTGGGACAAGGGGATCGTCGGCGGTGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGTTACGGCA
AGGGTGGCATCATAAGGAAACCTGTGGTGTGTAAAGAGAAAGGTCCTTGTTTCAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAG
GGCTTCGGCGGTGGCGGCGGTGGCGGTGGCTGCACCATCGACTGCTCTAAGAAATGTATCGGCTACTGTTAG
Protein sequenceShow/hide protein sequence
MNPFIPIFPLLIAILLLSPSFSLATARKDGGFAGMFGPGNGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGK
GFGGGGGGGGCTIDCSKKCIGYC