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Lsi01G003710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G003710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB-box type zinc finger family protein
Genome locationchr01:3266268..3266651
RNA-Seq ExpressionLsi01G003710
SyntenyLsi01G003710
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5078.29Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G +LVATVAFC +CV+KNRRNGK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE ENQVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]1.2e-4876.56Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT
        MKKLCELCGCVATVMCE+DAA LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G  LVATVAFCHNCV K R N      R  E+ CGSSNGGT
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT

Query:  -----------DDDDEMENQVVPWLSLS
                   DDDDE+ENQVVPWLSLS
Subjt:  -----------DDDDEMENQVVPWLSLS

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]4.4e-5179.84Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G KLVATVAFC NCV+KNRRNGK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE ENQVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]1.8e-4977.52Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKH RVLLCHDCQAPTPWNG+G +LVATVAFC NCV+KNRRNGK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE E+QVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]3.7e-5078.29Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G +LVATVAFC NCV+KNRR+GK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE ENQVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein1.2e-4978.4Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGG-
        MKKLCELCGCVATVMCESDAA LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNG+G  LVATVAFCHNCV KNRRN      R  E+ CGSS+GG 
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGG-

Query:  -------TDDDDEMENQVVPWLSLS
                DDDDE+ENQVVPWLSLS
Subjt:  -------TDDDDEMENQVVPWLSLS

A0A5A7UBH5 Putative zinc finger protein7.5e-4975.97Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT
        MKKLCELCGCVATVMCE+DAA LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G  LVATVAFCHNCV K R N      R  E+ CGSSNGGT
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT

Query:  ------------DDDDEMENQVVPWLSLS
                    DDDDE+ENQVVPWLSLS
Subjt:  ------------DDDDEMENQVVPWLSLS

A0A5D3CS61 Putative zinc finger protein5.7e-4976.56Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT
        MKKLCELCGCVATVMCE+DAA LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G  LVATVAFCHNCV K R N      R  E+ CGSSNGGT
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGT

Query:  -----------DDDDEMENQVVPWLSLS
                   DDDDE+ENQVVPWLSLS
Subjt:  -----------DDDDEMENQVVPWLSLS

A0A6J1GEL4 putative zinc finger protein At1g681902.1e-5179.84Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNG+G KLVATVAFC NCV+KNRRNGK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE ENQVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like8.9e-5077.52Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS
        MKKLCELC CVATV+CESD ARLCWGCDSKVHGANFLVGKH RVLLCHDCQAPTPWNG+G +LVATVAFC NCV+KNRRNGK    R     G EEG GS
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----GSEEGCGS

Query:  SN----GGTDDDDEMENQVVPWLSLSSHS
        SN    GG+D DDE E+QVVPWLSLSS S
Subjt:  SN----GGTDDDDEMENQVVPWLSLSSHS

SwissProt top hitse value%identityAlignment
Q1G3I2 B-box domain protein 305.6e-0958Show/hide
Query:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELCG  ATV CE+DAA LC  CD  VH ANFL  +HLR ++C  C+  T
Subjt:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

Q96502 Zinc finger protein CONSTANS-LIKE 21.6e-0834.45Show/hide
Query:  KLCELCGCVA-TVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ-APTPW---NGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGS-S
        + C+ C   A TV CE+D+A LC  CD++VH AN +  +H RV +C  C+ AP  +     A     A  A  H+     RR+ ++ +   S   C S +
Subjt:  KLCELCGCVA-TVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ-APTPW---NGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGS-S

Query:  NGGTD-DDDEMENQVVPWL
           TD D+DE + +V  WL
Subjt:  NGGTD-DDDEMENQVVPWL

Q9C9F4 Putative zinc finger protein At1g681904.7e-0850Show/hide
Query:  MKKLCELCGCV-ATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ
        M+++CE C    A V C +D A LC  CD+KVH AN L G+HLR +LC  C+
Subjt:  MKKLCELCGCV-ATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ

Q9LJB7 B-box zinc finger protein 322.1e-0844.44Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        M   CELCG  A + C +D+A LC  CD+K H +NFL  +H R ++C +C++ T
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

Q9LRM4 B-box domain protein 319.6e-0956Show/hide
Query:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELC   A+V CE+D+A LC  CD  VHGANFL  +H+R +LC  CQ  T
Subjt:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

Arabidopsis top hitse value%identityAlignment
AT3G02380.1 CONSTANS-like 21.2e-0934.45Show/hide
Query:  KLCELCGCVA-TVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ-APTPW---NGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGS-S
        + C+ C   A TV CE+D+A LC  CD++VH AN +  +H RV +C  C+ AP  +     A     A  A  H+     RR+ ++ +   S   C S +
Subjt:  KLCELCGCVA-TVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQ-APTPW---NGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGS-S

Query:  NGGTD-DDDEMENQVVPWL
           TD D+DE + +V  WL
Subjt:  NGGTD-DDDEMENQVVPWL

AT3G21890.1 B-box type zinc finger family protein6.8e-1056Show/hide
Query:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELC   A+V CE+D+A LC  CD  VHGANFL  +H+R +LC  CQ  T
Subjt:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

AT4G15248.1 B-box type zinc finger family protein4.0e-1058Show/hide
Query:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELCG  ATV CE+DAA LC  CD  VH ANFL  +HLR ++C  C+  T
Subjt:  CELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

AT4G27310.1 B-box type zinc finger family protein1.8e-2340Show/hide
Query:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQ-KN----RRNGKMTLSRGSEE----
        M K C+LC  VA + CESD A LCW CD KVHGANFLV KH R LLC  CQ+ TPW   GL+L  T + C +CV  KN    R N  ++ +RG EE    
Subjt:  MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQ-KN----RRNGKMTLSRGSEE----

Query:  -----------GCGSSNGGTD-----------------------DDDEMENQVVPWLS-------LSSHSHSSGS
                   G G      D                       DD+E ENQVVPW +       +SS S   GS
Subjt:  -----------GCGSSNGGTD-----------------------DDDEMENQVVPWLS-------LSSHSHSSGS

AT5G54470.1 B-box type zinc finger family protein1.0e-2647.2Show/hide
Query:  KKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----------GSE
        KK CELC  VA + CESD A LCW CD KVHGANFLV KH+R LLC  CQ+ TPW  +GL L  TV+ C +C+ + + N      R           G  
Subjt:  KKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSR-----------GSE

Query:  EGCGSSNGGTDDD---DEMENQVVP
        +G  S +  +D+D   +E+ENQVVP
Subjt:  EGCGSSNGGTDDD---DEMENQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTGTGCGAGCTCTGCGGCTGTGTGGCTACAGTGATGTGCGAATCGGACGCAGCCAGGTTGTGTTGGGGTTGCGATTCGAAGGTCCATGGTGCTAATTTTCT
AGTGGGGAAGCATTTGAGGGTTTTGCTGTGCCATGATTGCCAAGCCCCCACGCCTTGGAATGGGGCTGGGTTGAAGCTTGTGGCGACCGTTGCGTTTTGCCACAACTGTG
TTCAGAAAAATAGGAGAAATGGGAAGATGACACTGAGCAGAGGGAGTGAGGAAGGTTGTGGAAGCTCTAATGGCGGCACTGATGACGATGATGAGATGGAAAATCAAGTG
GTTCCTTGGTTATCTTTGTCCTCTCACTCTCACTCTAGCGGCAGCCCTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATTGTGCGAGCTCTGCGGCTGTGTGGCTACAGTGATGTGCGAATCGGACGCAGCCAGGTTGTGTTGGGGTTGCGATTCGAAGGTCCATGGTGCTAATTTTCT
AGTGGGGAAGCATTTGAGGGTTTTGCTGTGCCATGATTGCCAAGCCCCCACGCCTTGGAATGGGGCTGGGTTGAAGCTTGTGGCGACCGTTGCGTTTTGCCACAACTGTG
TTCAGAAAAATAGGAGAAATGGGAAGATGACACTGAGCAGAGGGAGTGAGGAAGGTTGTGGAAGCTCTAATGGCGGCACTGATGACGATGATGAGATGGAAAATCAAGTG
GTTCCTTGGTTATCTTTGTCCTCTCACTCTCACTCTAGCGGCAGCCCTAATTGA
Protein sequenceShow/hide protein sequence
MKKLCELCGCVATVMCESDAARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGAGLKLVATVAFCHNCVQKNRRNGKMTLSRGSEEGCGSSNGGTDDDDEMENQV
VPWLSLSSHSHSSGSPN