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Lsi01G004070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCysteine-rich PDZ-binding protein
Genome locationchr01:3468592..3470374
RNA-Seq ExpressionLsi01G004070
SyntenyLsi01G004070
Gene Ontology termsGO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR019367 - PDZ-binding protein, CRIPT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134750.1 cysteine-rich PDZ-binding protein [Cucumis sativus]4.6e-4576.61Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
XP_021887355.1 cysteine-rich PDZ-binding protein [Carica papaya]1.7e-4475.81Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNT E+GGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQDAKYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
XP_022142069.1 cysteine-rich PDZ-binding protein [Momordica charantia]2.3e-4475Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQDAKYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
XP_038882901.1 cysteine-rich PDZ-binding protein [Benincasa hispida]1.6e-4577.42Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQDAKYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
XP_039053688.1 cysteine-rich PDZ-binding protein-like isoform X1 [Hibiscus syriacus]7.8e-4575.81Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKC+KKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKK RF         H  D         ++   WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTK YKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
TrEMBL top hitse value%identityAlignment
A0A0A0KHE3 Cysteine-rich PDZ-binding protein2.2e-4576.61Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
A0A1S3B0M5 Cysteine-rich PDZ-binding protein2.2e-4576.61Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
A0A5D3CPV5 Cysteine-rich PDZ-binding protein2.2e-4576.61Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
A0A6J1CKJ0 Cysteine-rich PDZ-binding protein1.1e-4475Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQDAKYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
A0A6J1IVK1 Cysteine-rich PDZ-binding protein1.1e-4475.81Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKR                            WTPYGNTKCIICKQQVHQD KYCHTCA
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCA

Query:  YSKGVCAMCGKQVLDTKFYKQSNV
        YSKGVCAMCGKQVLDTK YKQSNV
Subjt:  YSKGVCAMCGKQVLDTKFYKQSNV
SwissProt top hitse value%identityAlignment
O70333 Cysteine-rich PDZ-binding protein9.0e-2853.49Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK RF                             PYG  K   C ICK  VHQ  + Y
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY

Query:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        C  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Q1WCC0 Cysteine-rich PDZ-binding protein1.2e-2752.34Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGN---TKCIICKQQVHQD-AKYC
        MVCEKCEKKL +VI PD WK+GA NT ESGGRKINENK+L+ KK                  +G         + PYG    + C ICK  VHQ  + YC
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGN---TKCIICKQQVHQD-AKYC

Query:  HTCAYSKGVCAMCGKQVLDTKFYKQSNV
          CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  HTCAYSKGVCAMCGKQVLDTKFYKQSNV
Q3ZC66 Cysteine-rich PDZ-binding protein2.0e-2753.49Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY
        MVCEKCEKKL  VI PD WK+GA NT ESGGRK+NENK L SKK RF                             PYG  K   C ICK  VHQ  + Y
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY

Query:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        C  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Q567Z6 Cysteine-rich PDZ-binding protein2.0e-2751.94Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNT---KCIICKQQVHQD-AKY
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK+L SKK RF                             PYG +    C ICK  VHQ  + Y
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNT---KCIICKQQVHQD-AKY

Query:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        C  CAY KG+CAMCGK+V+DTK YKQ++V
Subjt:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Q792Q4 Cysteine-rich PDZ-binding protein9.0e-2853.49Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK RF                             PYG  K   C ICK  VHQ  + Y
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTK---CIICKQQVHQ-DAKY

Query:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        C  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  CHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Arabidopsis top hitse value%identityAlignment
AT1G61780.1 postsynaptic protein-related4.3e-4165.87Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYG--NTKCIICKQQVHQDAKYCHT
        MVC+KCEKKLSKVIVPDKWK+GA N  E GGRKINENKLLSKK R                            W+PY    TKC+ICKQQVHQD KYCHT
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYG--NTKCIICKQQVHQDAKYCHT

Query:  CAYSKGVCAMCGKQVLDTKFYKQSNV
        CAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  CAYSKGVCAMCGKQVLDTKFYKQSNV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCGAGCAACACACAAGAAAGTGGTGGCCGTAAAATTAACGAAAA
CAAGCTCCTCTCCAAGAAGAAAAGGTTTGTTCTTTTCAATAATTTCCTCCGAGCTCATTCTTGTGATTGTATACATTCTGGAGATAAGAGCAGTAATGTCTACTTATTGT
GGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACACCAGGATGCCAAGTATTGTCACACGTGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGG
AAGCAGGTACTTGACACCAAGTTTTACAAACAGAGCAATGTGTAA
mRNA sequenceShow/hide mRNA sequence
GTTGAATAGATCAACAACACATTATAAATAAAATTAAAAAAAAAATTAAAATCTAATGGAACAATTTCTTAAATCTAGGGATTAATTTGATTTGCTCATCCGATTCCGAT
CAAAGAAAGGGGTTGTGATTTGCCAATTGCGACCCTCTTATTTTCTTTTTACAGTTTTGACGAAAAGTTGCTGGAACCCTCTTCCTCCATAGATCTCTAATTAGGGCTCT
GATCACCTTCGTTGGATTATTCGGTTCCAGTTTCACCTAACCCAGCAGTTGGGAACGACAGCCATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCC
GGACAAGTGGAAAGAAGGTGCGAGCAACACACAAGAAAGTGGTGGCCGTAAAATTAACGAAAACAAGCTCCTCTCCAAGAAGAAAAGGTTTGTTCTTTTCAATAATTTCC
TCCGAGCTCATTCTTGTGATTGTATACATTCTGGAGATAAGAGCAGTAATGTCTACTTATTGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTA
CACCAGGATGCCAAGTATTGTCACACGTGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAGGTACTTGACACCAAGTTTTACAAACAGAGCAATGTGTAATT
AGAAGCCATAATTGATATTCGACTTGTAACTTCATCATCAAGGGTTAATAACATGTACTTTGATCCTGATATAATTTTCGTCCTAGTATCAATCTATAGTAAATGACTTG
ATAGTTCCTTCTATTTTCTGATCTGACTTGAAGTGTAATTCAACTTAGAATTAACATTTGTTTGTTAAATGAAATTATGTATTATAAAGTTCTACTTTTCCTTGTCAA
Protein sequenceShow/hide protein sequence
MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRFVLFNNFLRAHSCDCIHSGDKSSNVYLLWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCG
KQVLDTKFYKQSNV