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Lsi01G004190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:3554199..3557318
RNA-Seq ExpressionLsi01G004190
SyntenyLsi01G004190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]1.1e-4492.38Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQTNFAN P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        +LLSS
Subjt:  LLLSS

XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]4.8e-4390.48Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQT FAN P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        +LLSS
Subjt:  LLLSS

XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]5.9e-4186.67Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+   ANL 
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
          LSS
Subjt:  LLLSS

XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]3.4e-4188.35Show/hide
Query:  NGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLL
        NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+TNFANLP L
Subjt:  NGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLL

Query:  LSS
        LSS
Subjt:  LSS

XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]1.0e-4595.24Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQV+SQIRNCKSLFG KQT+F N P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        LLLSS
Subjt:  LLLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein5.5e-4592.38Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQTNFAN P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        +LLSS
Subjt:  LLLSS

A0A1S3B0N9 uncharacterized protein LOC1034846042.3e-4390.48Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQT FAN P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        +LLSS
Subjt:  LLLSS

A0A5D3CMA4 Uncharacterized protein2.3e-4390.48Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQT FAN P
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
        +LLSS
Subjt:  LLLSS

A0A6J1CLW2 uncharacterized protein LOC1110124782.8e-4186.67Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP
        RPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+   ANL 
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLP

Query:  LLLSS
          LSS
Subjt:  LLLSS

A0A6J1KP23 uncharacterized protein LOC1114974081.7e-4188.35Show/hide
Query:  NGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLL
        NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+TNFANLP L
Subjt:  NGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLL

Query:  LSS
        LSS
Subjt:  LSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein1.0e-1140.86Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF
        RP  YSK+DKEDPEE++ RRA+FLI K L+ AD + +     S++R+++  LKV+ G+RL KL++S ++++     G+ K   + +R  K +F
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF

AT4G04745.1 unknown protein6.8e-1137.5Show/hide
Query:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        P  Y+K++KEDP+E+IHRRAQFLI KVLERADS  +    R         IR+  +++R G++L+KL+K+     + L     K     +  C S     
Subjt:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLS
            ++LP L S
Subjt:  QTNFANLPLLLS

AT4G21902.1 unknown protein2.8e-0935.34Show/hide
Query:  MSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAMASISTLKIG-VYKQVVSQIRNCKSL
        M  PN Y+K++KED  EIIHRRAQFLI+K+L+RAD         + + +++   R+  ++++ G++L+KL+KS    +   K G +  +V+  +R  +  
Subjt:  MSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAMASISTLKIG-VYKQVVSQIRNCKSL

Query:  FGRKQTNFANLPLLLS
        F     N +NLP L +
Subjt:  FGRKQTNFANLPLLLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGGCCAAATGGTTACTCTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGAACGAGCAGATTCCAT
GGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAAAGTGCAATGGCAAGTATTTCAACTCTCAAGA
TTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTGCCAATCTTCCTCTTTTGTTATCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGGCCAAATGGTTACTCTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGAACGAGCAGATTCCAT
GGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAAAGTGCAATGGCAAGTATTTCAACTCTCAAGA
TTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTGCCAATCTTCCTCTTTTGTTATCATCTTGAAGTGAA
CTTACCATAGTTTCTTCAGTCAAAATTGCTTCTGTTTTCCCTTGGAGCTTTAATTTTGTTCGTGAGCTCTGTTATGTGAAAGAAAATTTTATCAAGCATTTATTTGGGTG
GTGGTTTCCTTCCCTTTTTTTCTTTTTCTTTTTCTTTTTCTTTCTTTCCAGTTTTTCTTTAAACCTACGAAAGATTACGAAATCGTGGATTAACTGAGTAAATCTAATAT
TTAACATTACCAGGTAATCAAATTCAAGTC
Protein sequenceShow/hide protein sequence
MSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLLLSS