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Lsi01G004300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat family protein
Genome locationchr01:3625304..3625540
RNA-Seq ExpressionLsi01G004300
SyntenyLsi01G004300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603780.1 Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2789.74Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAMEE+D SKAKGG+ SDKK GSK G AKA AATVAGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

KAG7026631.1 hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2688.31Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS
        MAAEAPSWADQWGAGGIGA+EE+D SKAKG   SDKK  SKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS

KAG7033951.1 Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2789.74Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAMEE+D SKAKGG+ SDKK GSK G AKA AATVAGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

KGN49108.1 hypothetical protein Csa_002989 [Cucumis sativus]2.4e-3196.15Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAMEE+DDSKAKGGRS+DKKGGSKPGFAK KAATVAGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

TYK13043.1 Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa]2.9e-2994.87Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAM EEDDSKAKGGRS+DKK GSKPGFAKAKAAT+AGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

TrEMBL top hitse value%identityAlignment
A0A0A0KHT9 Uncharacterized protein1.1e-3196.15Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAMEE+DDSKAKGGRS+DKKGGSKPGFAK KAATVAGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

A0A2P5EAN9 Uncharacterized protein (Fragment)2.6e-1563.64Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS
        MA+E PSWADQWGAGGIGAMEE+D + AK    ++KKG  K G  KAKAA +AGA+KI SG SNGIKWI N  +K +
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS

A0A4S4DD10 Uncharacterized protein3.0e-1666.67Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK
        MA EAPSWADQWGAGGIGAME ED+ KA G + SDKK GS  G  KAKA  +AGA+K+ SG  NGIKWI N  +K
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK

A0A5D3CM93 Ankyrin repeat family protein, putative isoform 11.4e-2994.87Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGAM EEDDSKAKGGRS+DKK GSKPGFAKAKAAT+AGAKKIGSGISNGIKWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK

W9RHJ5 Uncharacterized protein8.8e-1665.33Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK
        MA+EAPSWADQWGAGGIGA+EEED++ +K    ++KKG  K G  KAKAA +AGA+KI SG SNGIKWI N  +K
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11740.1 ankyrin repeat family protein2.8e-0641.56Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS
        MA+EAPSWADQWG GGIG M  E+ +  K   +  K G +K G  KAK     G         N +K ++  +KK S
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSS

AT1G62045.1 BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1)2.8e-0659.09Show/hide
Query:  MAAEAPSWADQWGAGGIGAMEEEDDSKAK---GGRSSDKKGGSK
        MA+EAPSWADQWG GGIG M EED++K+K   GG++S +   +K
Subjt:  MAAEAPSWADQWGAGGIGAMEEEDDSKAK---GGRSSDKKGGSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGGAAGCACCAAGCTGGGCTGACCAATGGGGAGCCGGAGGCATTGGTGCCATGGAAGAAGAAGATGACAGTAAAGCCAAAGGTGGCCGGAGCTCGGACAAGAA
GGGTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCAACCGTGGCTGGTGCCAAAAAGATAGGGAGTGGAATATCTAATGGCATCAAGTGGATCATGAACCCACGCA
AGAAAAGCTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGGAAGCACCAAGCTGGGCTGACCAATGGGGAGCCGGAGGCATTGGTGCCATGGAAGAAGAAGATGACAGTAAAGCCAAAGGTGGCCGGAGCTCGGACAAGAA
GGGTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCAACCGTGGCTGGTGCCAAAAAGATAGGGAGTGGAATATCTAATGGCATCAAGTGGATCATGAACCCACGCA
AGAAAAGCTCCAAGTAA
Protein sequenceShow/hide protein sequence
MAAEAPSWADQWGAGGIGAMEEEDDSKAKGGRSSDKKGGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK